RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 FRMPD1Q5SYB0 1578 aa15.41■□□□□ 0.06
GGPS1-204ENST00000471812 KDM4FA0A1W2PPD8 638 aa15.39■□□□□ 0.05
GGPS1-204ENST00000471812 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
GGPS1-204ENST00000471812 CASKIN1Q8WXD9 1431 aa15.38■□□□□ 0.05
GGPS1-204ENST00000471812 ARAP3Q8WWN8 1544 aa15.37■□□□□ 0.05
GGPS1-204ENST00000471812 CEP162Q5TB80 1403 aa15.35■□□□□ 0.05
GGPS1-204ENST00000471812 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
GGPS1-204ENST00000471812 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
GGPS1-204ENST00000471812 MYO5CQ9NQX4 1742 aa15.33■□□□□ 0.04
GGPS1-204ENST00000471812 TROQ12816 1431 aaPredicted RBP15.33■□□□□ 0.04
GGPS1-204ENST00000471812 NEO1Q92859 1461 aa15.33■□□□□ 0.04
GGPS1-204ENST00000471812 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
GGPS1-204ENST00000471812 FANCAO15360 1455 aa15.32■□□□□ 0.04
GGPS1-204ENST00000471812 ADGRL1O94910 1474 aa15.32■□□□□ 0.04
GGPS1-204ENST00000471812 CDC42BPBQ9Y5S2 1711 aa15.31■□□□□ 0.04
GGPS1-204ENST00000471812 SIGLEC1Q9BZZ2 1709 aa15.31■□□□□ 0.04
GGPS1-204ENST00000471812 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
GGPS1-204ENST00000471812 AKNAQ7Z591 1439 aa15.3■□□□□ 0.04
GGPS1-204ENST00000471812 PLCH2O75038 1416 aa15.28■□□□□ 0.04
GGPS1-204ENST00000471812 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
GGPS1-204ENST00000471812 CDC42BPAQ5VT25 1732 aa15.28■□□□□ 0.04
GGPS1-204ENST00000471812 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.04
GGPS1-204ENST00000471812 CFAP74Q9C0B2 1584 aa15.26■□□□□ 0.03
GGPS1-204ENST00000471812 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
GGPS1-204ENST00000471812 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
GGPS1-204ENST00000471812 YEATS2Q9ULM3 1422 aa15.24■□□□□ 0.03
GGPS1-204ENST00000471812 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
GGPS1-204ENST00000471812 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
GGPS1-204ENST00000471812 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
GGPS1-204ENST00000471812 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
GGPS1-204ENST00000471812 SCAPERQ9BY12 1400 aa15.22■□□□□ 0.03
GGPS1-204ENST00000471812 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
GGPS1-204ENST00000471812 ZMYM4Q5VZL5 1548 aa15.21■□□□□ 0.03
GGPS1-204ENST00000471812 POGZQ7Z3K3 1410 aa15.2■□□□□ 0.02
GGPS1-204ENST00000471812 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
GGPS1-204ENST00000471812 SAMD9LQ8IVG5 1584 aa15.18■□□□□ 0.02
GGPS1-204ENST00000471812 ABCC1P33527 1531 aa15.17■□□□□ 0.02
GGPS1-204ENST00000471812 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
GGPS1-204ENST00000471812 ADAMTSL3P82987 1691 aa15.17■□□□□ 0.02
GGPS1-204ENST00000471812 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
GGPS1-204ENST00000471812 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
GGPS1-204ENST00000471812 BCORL1Q5H9F3 1711 aa15.16■□□□□ 0.02
GGPS1-204ENST00000471812 ZFYVE16Q7Z3T8 1539 aa15.16■□□□□ 0.02
GGPS1-204ENST00000471812 TIAM1Q13009 1591 aa15.15■□□□□ 0.02
GGPS1-204ENST00000471812 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
GGPS1-204ENST00000471812 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
GGPS1-204ENST00000471812 MADDQ8WXG6 1647 aa15.14■□□□□ 0.01
GGPS1-204ENST00000471812 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
GGPS1-204ENST00000471812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
GGPS1-204ENST00000471812 KDM5CP41229 1560 aa15.14■□□□□ 0.01
GGPS1-204ENST00000471812 EHBP1L1Q8N3D4 1523 aa15.13■□□□□ 0.01
GGPS1-204ENST00000471812 ABCA6Q8N139 1617 aa15.13■□□□□ 0.01
GGPS1-204ENST00000471812 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
GGPS1-204ENST00000471812 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
GGPS1-204ENST00000471812 DIP2CQ9Y2E4 1556 aa15.11■□□□□ 0.01
GGPS1-204ENST00000471812 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
GGPS1-204ENST00000471812 ZNF644Q9H582 1327 aaPredicted RBP15.11■□□□□ 0.01
GGPS1-204ENST00000471812 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
GGPS1-204ENST00000471812 RIMS1Q86UR5 1692 aaKnown RBP15.1■□□□□ 0.01
GGPS1-204ENST00000471812 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
GGPS1-204ENST00000471812 HECW2Q9P2P5 1572 aa15.1■□□□□ 0.01
GGPS1-204ENST00000471812 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0.01
GGPS1-204ENST00000471812 ARID4BQ4LE39 1312 aaPredicted RBP15.08■□□□□ 0
GGPS1-204ENST00000471812 NCOA2Q15596 1464 aa15.08■□□□□ 0
GGPS1-204ENST00000471812 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
GGPS1-204ENST00000471812 CCNB3Q8WWL7 1395 aa15.07■□□□□ 0
GGPS1-204ENST00000471812 MAGI2Q86UL8 1455 aa15.07■□□□□ 0
GGPS1-204ENST00000471812 SUPT6HQ7KZ85 1726 aaKnown RBP15.06■□□□□ 0
GGPS1-204ENST00000471812 MLECQ14165 292 aa15.06■□□□□ 0
GGPS1-204ENST00000471812 PTPRMP28827 1452 aa15.06■□□□□ 0
GGPS1-204ENST00000471812 ATP10AO60312 1499 aa15.05■□□□□ -0
GGPS1-204ENST00000471812 LRRC9Q6ZRR7 1453 aa15.05■□□□□ -0
GGPS1-204ENST00000471812 FER1L4A9Z1Z3 1794 aa15.03■□□□□ -0
GGPS1-204ENST00000471812 MLH3Q9UHC1 1453 aa15.03■□□□□ -0
GGPS1-204ENST00000471812 C9orf84Q5VXU9 1444 aa15.03■□□□□ -0
GGPS1-204ENST00000471812 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
GGPS1-204ENST00000471812 INO80Q9ULG1 1556 aaPredicted RBP15.02□□□□□ -0.01
GGPS1-204ENST00000471812 MBD5Q9P267 1494 aa15.01□□□□□ -0.01
GGPS1-204ENST00000471812 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
GGPS1-204ENST00000471812 MYT1LQ9UL68 1186 aa14.99□□□□□ -0.01
GGPS1-204ENST00000471812 CAMSAP2Q08AD1 1489 aa14.99□□□□□ -0.01
GGPS1-204ENST00000471812 MAP3K1Q13233 1512 aa14.98□□□□□ -0.01
GGPS1-204ENST00000471812 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
GGPS1-204ENST00000471812 KIAA1107Q9UPP5 1409 aa14.97□□□□□ -0.01
GGPS1-204ENST00000471812 ADGBQ8N7X0 1667 aa14.96□□□□□ -0.01
GGPS1-204ENST00000471812 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
GGPS1-204ENST00000471812 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
GGPS1-204ENST00000471812 PLEKHH2Q8IVE3 1493 aa14.94□□□□□ -0.02
GGPS1-204ENST00000471812 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
GGPS1-204ENST00000471812 AGLP35573 1532 aa14.92□□□□□ -0.02
GGPS1-204ENST00000471812 C3P01024 1663 aa14.91□□□□□ -0.02
GGPS1-204ENST00000471812 LMTK3Q96Q04 1460 aa14.91□□□□□ -0.02
GGPS1-204ENST00000471812 MYOM3Q5VTT5 1437 aa14.91□□□□□ -0.02
GGPS1-204ENST00000471812 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
GGPS1-204ENST00000471812 A2MP01023 1474 aa14.89□□□□□ -0.03
GGPS1-204ENST00000471812 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
GGPS1-204ENST00000471812 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
GGPS1-204ENST00000471812 PTPN23Q9H3S7 1636 aa14.86□□□□□ -0.03
GGPS1-204ENST00000471812 HSPA2P54652 639 aa14.86□□□□□ -0.03
GGPS1-204ENST00000471812 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms