RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 FRMPD1Q5SYB0 1578 aa23.75■■□□□ 1.39
HOXB3-206ENST00000471459 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
HOXB3-206ENST00000471459 POGZQ7Z3K3 1410 aa23.73■■□□□ 1.39
HOXB3-206ENST00000471459 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
HOXB3-206ENST00000471459 RICTORQ6R327 1708 aa23.71■■□□□ 1.39
HOXB3-206ENST00000471459 AFAP1Q8N556 730 aa23.7■■□□□ 1.38
HOXB3-206ENST00000471459 ZNF777Q9ULD5 760 aaPredicted RBP23.7■■□□□ 1.38
HOXB3-206ENST00000471459 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
HOXB3-206ENST00000471459 ZMYM4Q5VZL5 1548 aa23.69■■□□□ 1.38
HOXB3-206ENST00000471459 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
HOXB3-206ENST00000471459 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
HOXB3-206ENST00000471459 ARHGEF40Q8TER5 1519 aa23.67■■□□□ 1.38
HOXB3-206ENST00000471459 YEATS2Q9ULM3 1422 aa23.66■■□□□ 1.38
HOXB3-206ENST00000471459 CCNB3Q8WWL7 1395 aa23.65■■□□□ 1.38
HOXB3-206ENST00000471459 ATP10AO60312 1499 aa23.63■■□□□ 1.37
HOXB3-206ENST00000471459 MLECQ14165 292 aa23.62■■□□□ 1.37
HOXB3-206ENST00000471459 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
HOXB3-206ENST00000471459 GPATCH8Q9UKJ3 1502 aaKnown RBP23.59■■□□□ 1.37
HOXB3-206ENST00000471459 PTPRMP28827 1452 aa23.58■■□□□ 1.37
HOXB3-206ENST00000471459 CDC42BPBQ9Y5S2 1711 aa23.58■■□□□ 1.37
HOXB3-206ENST00000471459 C9orf84Q5VXU9 1444 aa23.58■■□□□ 1.36
HOXB3-206ENST00000471459 ADAMTSL3P82987 1691 aa23.57■■□□□ 1.36
HOXB3-206ENST00000471459 BCORL1Q5H9F3 1711 aa23.56■■□□□ 1.36
HOXB3-206ENST00000471459 HNRNPMP52272 730 aaKnown RBP eCLIP23.56■■□□□ 1.36
HOXB3-206ENST00000471459 TRAPPC8Q9Y2L5 1435 aa23.55■■□□□ 1.36
HOXB3-206ENST00000471459 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
HOXB3-206ENST00000471459 PLEKHH2Q8IVE3 1493 aa23.54■■□□□ 1.36
HOXB3-206ENST00000471459 MLH3Q9UHC1 1453 aa23.54■■□□□ 1.36
HOXB3-206ENST00000471459 SPAG9O60271 1321 aaKnown RBP23.53■■□□□ 1.36
HOXB3-206ENST00000471459 ABCC1P33527 1531 aa23.53■■□□□ 1.36
HOXB3-206ENST00000471459 EHBP1L1Q8N3D4 1523 aa23.53■■□□□ 1.36
HOXB3-206ENST00000471459 KDM5CP41229 1560 aa23.52■■□□□ 1.36
HOXB3-206ENST00000471459 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
HOXB3-206ENST00000471459 CDC42BPAQ5VT25 1732 aa23.52■■□□□ 1.36
HOXB3-206ENST00000471459 ARHGEF12Q9NZN5 1544 aa23.51■■□□□ 1.35
HOXB3-206ENST00000471459 APLP2Q06481 763 aa23.51■■□□□ 1.35
HOXB3-206ENST00000471459 ESF1Q9H501 851 aaKnown RBP23.51■■□□□ 1.35
HOXB3-206ENST00000471459 KIAA1107Q9UPP5 1409 aa23.5■■□□□ 1.35
HOXB3-206ENST00000471459 HECW2Q9P2P5 1572 aa23.49■■□□□ 1.35
HOXB3-206ENST00000471459 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
HOXB3-206ENST00000471459 ITSN2Q9NZM3 1697 aa23.44■■□□□ 1.34
HOXB3-206ENST00000471459 SAMD9LQ8IVG5 1584 aa23.44■■□□□ 1.34
HOXB3-206ENST00000471459 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
HOXB3-206ENST00000471459 ZNF644Q9H582 1327 aaPredicted RBP23.43■■□□□ 1.34
HOXB3-206ENST00000471459 RSPH4AQ5TD94 716 aa23.43■■□□□ 1.34
HOXB3-206ENST00000471459 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
HOXB3-206ENST00000471459 TIAM1Q13009 1591 aa23.41■■□□□ 1.34
HOXB3-206ENST00000471459 DIP2CQ9Y2E4 1556 aa23.41■■□□□ 1.34
HOXB3-206ENST00000471459 NCOA2Q15596 1464 aa23.41■■□□□ 1.34
HOXB3-206ENST00000471459 REREQ9P2R6 1566 aa23.39■■□□□ 1.33
HOXB3-206ENST00000471459 SUPT6HQ7KZ85 1726 aaKnown RBP23.39■■□□□ 1.33
HOXB3-206ENST00000471459 LRRC9Q6ZRR7 1453 aa23.38■■□□□ 1.33
HOXB3-206ENST00000471459 SIGLEC1Q9BZZ2 1709 aa23.36■■□□□ 1.33
HOXB3-206ENST00000471459 AGLP35573 1532 aa23.36■■□□□ 1.33
HOXB3-206ENST00000471459 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
HOXB3-206ENST00000471459 ABCA6Q8N139 1617 aa23.35■■□□□ 1.33
HOXB3-206ENST00000471459 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
HOXB3-206ENST00000471459 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
HOXB3-206ENST00000471459 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
HOXB3-206ENST00000471459 CEBPAP49715 358 aaPredicted RBP23.34■■□□□ 1.33
HOXB3-206ENST00000471459 KIDINS220Q9ULH0 1771 aa23.34■■□□□ 1.33
HOXB3-206ENST00000471459 FER1L4A9Z1Z3 1794 aa23.32■■□□□ 1.32
HOXB3-206ENST00000471459 ATP7AQ04656 1500 aa23.32■■□□□ 1.32
HOXB3-206ENST00000471459 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
HOXB3-206ENST00000471459 RTEL1-TNFRSF6BF6WH68 1400 aa23.3■■□□□ 1.32
HOXB3-206ENST00000471459 A2MP01023 1474 aa23.3■■□□□ 1.32
HOXB3-206ENST00000471459 CNTLNQ9NXG0 1405 aa23.28■■□□□ 1.32
HOXB3-206ENST00000471459 GGT6Q6P531 493 aa23.28■■□□□ 1.32
HOXB3-206ENST00000471459 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
HOXB3-206ENST00000471459 CAMSAP2Q08AD1 1489 aa23.27■■□□□ 1.32
HOXB3-206ENST00000471459 CCDC141Q6ZP82 1450 aa23.26■■□□□ 1.31
HOXB3-206ENST00000471459 LMTK3Q96Q04 1460 aa23.26■■□□□ 1.31
HOXB3-206ENST00000471459 HSPA2P54652 639 aa23.26■■□□□ 1.31
HOXB3-206ENST00000471459 INO80Q9ULG1 1556 aaPredicted RBP23.23■■□□□ 1.31
HOXB3-206ENST00000471459 DHX29Q7Z478 1369 aaKnown RBP23.23■■□□□ 1.31
HOXB3-206ENST00000471459 MIA2Q96PC5 1412 aa23.23■■□□□ 1.31
HOXB3-206ENST00000471459 MYOM3Q5VTT5 1437 aa23.22■■□□□ 1.31
HOXB3-206ENST00000471459 UHRF1BP1Q6BDS2 1440 aa23.19■■□□□ 1.3
HOXB3-206ENST00000471459 ZMYM3Q14202 1370 aa23.19■■□□□ 1.3
HOXB3-206ENST00000471459 KIF3BO15066 747 aa23.19■■□□□ 1.3
HOXB3-206ENST00000471459 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
HOXB3-206ENST00000471459 ARHGEF5Q12774 1597 aa23.15■■□□□ 1.3
HOXB3-206ENST00000471459 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
HOXB3-206ENST00000471459 PLXNC1O60486 1568 aa23.14■■□□□ 1.3
HOXB3-206ENST00000471459 SETD1BQ9UPS6 1966 aaKnown RBP23.13■■□□□ 1.29
HOXB3-206ENST00000471459 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
HOXB3-206ENST00000471459 PREX1Q8TCU6 1659 aa23.1■■□□□ 1.29
HOXB3-206ENST00000471459 NPATQ14207 1427 aa23.1■■□□□ 1.29
HOXB3-206ENST00000471459 C3P01024 1663 aa23.09■■□□□ 1.29
HOXB3-206ENST00000471459 ILDR1Q86SU0 546 aaPredicted RBP23.06■■□□□ 1.28
HOXB3-206ENST00000471459 MROH2AA6NES4 1674 aa23.05■■□□□ 1.28
HOXB3-206ENST00000471459 FGD6Q6ZV73 1430 aa23.03■■□□□ 1.28
HOXB3-206ENST00000471459 CLTCQ00610 1675 aaKnown RBP23.02■■□□□ 1.28
HOXB3-206ENST00000471459 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
HOXB3-206ENST00000471459 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
HOXB3-206ENST00000471459 FAM50AQ14320 339 aaKnown RBP23■■□□□ 1.27
HOXB3-206ENST00000471459 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
HOXB3-206ENST00000471459 PTPN23Q9H3S7 1636 aa22.99■■□□□ 1.27
HOXB3-206ENST00000471459 ABCC5O15440 1437 aa22.99■■□□□ 1.27
HOXB3-206ENST00000471459 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms