RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 BBXQ8WY36 941 aaPredicted RBP8.9□□□□□ -0.98
CFHR3-205ENST00000471440 MFRPQ9BY79 579 aa8.9□□□□□ -0.99
CFHR3-205ENST00000471440 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.99
CFHR3-205ENST00000471440 SOX12O15370 315 aa8.89□□□□□ -0.99
CFHR3-205ENST00000471440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.99
CFHR3-205ENST00000471440 PAXIP1Q6ZW49 1069 aaPredicted RBP8.88□□□□□ -0.99
CFHR3-205ENST00000471440 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
CFHR3-205ENST00000471440 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
CFHR3-205ENST00000471440 ILDR1Q86SU0 546 aaPredicted RBP8.86□□□□□ -0.99
CFHR3-205ENST00000471440 PDCD7Q8N8D1 485 aaKnown RBP8.86□□□□□ -0.99
CFHR3-205ENST00000471440 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
CFHR3-205ENST00000471440 NLRP6P59044 892 aa8.85□□□□□ -0.99
CFHR3-205ENST00000471440 MS4A4AQ96JQ5 239 aa8.84□□□□□ -0.99
CFHR3-205ENST00000471440 CFAP44Q96MT7 982 aa8.84□□□□□ -0.99
CFHR3-205ENST00000471440 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
CFHR3-205ENST00000471440 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -0.99
CFHR3-205ENST00000471440 GTPBP6O43824 516 aaPredicted RBP8.82□□□□□ -1
CFHR3-205ENST00000471440 FAM205CA6NFA0 338 aa8.82□□□□□ -1
CFHR3-205ENST00000471440 DPY19L2Q6NUT2 758 aa8.81□□□□□ -1
CFHR3-205ENST00000471440 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
CFHR3-205ENST00000471440 KRTAP3-2Q9BYR7 98 aa8.81□□□□□ -1
CFHR3-205ENST00000471440 RYDENQ9NUL5 291 aaKnown RBP8.81□□□□□ -1
CFHR3-205ENST00000471440 SPRYD3Q8NCJ5 442 aa8.79□□□□□ -1
CFHR3-205ENST00000471440 PPP1R37O75864 691 aa8.77□□□□□ -1
CFHR3-205ENST00000471440 G3V3G9 751 aa8.75□□□□□ -1.01
CFHR3-205ENST00000471440 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
CFHR3-205ENST00000471440 POTEB3A0JP26 581 aa8.75□□□□□ -1.01
CFHR3-205ENST00000471440 POTEBQ6S5H4 581 aa8.75□□□□□ -1.01
CFHR3-205ENST00000471440 BOLA1Q9Y3E2 137 aa8.73□□□□□ -1.01
CFHR3-205ENST00000471440 MICALL2Q8IY33 904 aa8.72□□□□□ -1.01
CFHR3-205ENST00000471440 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
CFHR3-205ENST00000471440 HOXB1P14653 301 aaPredicted RBP8.71□□□□□ -1.02
CFHR3-205ENST00000471440 ZNF710Q8N1W2 664 aa8.71□□□□□ -1.02
CFHR3-205ENST00000471440 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
CFHR3-205ENST00000471440 ARXQ96QS3 562 aa8.69□□□□□ -1.02
CFHR3-205ENST00000471440 RNF166Q96A37 237 aaPredicted RBP8.68□□□□□ -1.02
CFHR3-205ENST00000471440 ERBB3P21860 1342 aa8.68□□□□□ -1.02
CFHR3-205ENST00000471440 RIMBP2O15034 1052 aa8.68□□□□□ -1.02
CFHR3-205ENST00000471440 HOXB3P14651 431 aaPredicted RBP8.66□□□□□ -1.02
CFHR3-205ENST00000471440 PTGER2P43116 358 aa8.66□□□□□ -1.02
CFHR3-205ENST00000471440 CADPS2Q86UW7 1296 aa8.63□□□□□ -1.03
CFHR3-205ENST00000471440 MYT1LQ9UL68 1186 aa8.62□□□□□ -1.03
CFHR3-205ENST00000471440 TMEM92Q6UXU6 159 aa8.61□□□□□ -1.03
CFHR3-205ENST00000471440 ZSWIM6Q9HCJ5 1215 aa8.61□□□□□ -1.03
CFHR3-205ENST00000471440 NBR1Q14596 966 aa8.61□□□□□ -1.03
CFHR3-205ENST00000471440 CCDC180Q9P1Z9 1646 aa8.6□□□□□ -1.03
CFHR3-205ENST00000471440 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
CFHR3-205ENST00000471440 NCKAP5LQ9HCH0 1330 aa8.58□□□□□ -1.04
CFHR3-205ENST00000471440 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
CFHR3-205ENST00000471440 C2orf72A6NCS6 295 aa8.57□□□□□ -1.04
CFHR3-205ENST00000471440 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
CFHR3-205ENST00000471440 CRISPLD2Q9H0B8 497 aa8.57□□□□□ -1.04
CFHR3-205ENST00000471440 VARS2Q5ST30 1063 aaKnown RBP8.56□□□□□ -1.04
CFHR3-205ENST00000471440 KIF3CO14782 793 aa8.55□□□□□ -1.04
CFHR3-205ENST00000471440 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
CFHR3-205ENST00000471440 PDE4AP27815 886 aa8.53□□□□□ -1.04
CFHR3-205ENST00000471440 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
CFHR3-205ENST00000471440 DSG2Q14126 1118 aa8.51□□□□□ -1.05
CFHR3-205ENST00000471440 DDX27Q96GQ7 796 aaKnown RBP8.51□□□□□ -1.05
CFHR3-205ENST00000471440 FOXK1P85037 733 aa8.5□□□□□ -1.05
CFHR3-205ENST00000471440 PPP1R15BQ5SWA1 713 aa8.5□□□□□ -1.05
CFHR3-205ENST00000471440 MFSD10Q14728 455 aa8.49□□□□□ -1.05
CFHR3-205ENST00000471440 PLPP6Q8IY26 295 aa8.48□□□□□ -1.05
CFHR3-205ENST00000471440 HOMEZQ8IX15 550 aa8.46□□□□□ -1.05
CFHR3-205ENST00000471440 GPR153Q6NV75 609 aa8.46□□□□□ -1.06
CFHR3-205ENST00000471440 WDR70Q9NW82 654 aa8.46□□□□□ -1.06
CFHR3-205ENST00000471440 ANKRD13DQ6ZTN6 518 aa8.42□□□□□ -1.06
CFHR3-205ENST00000471440 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
CFHR3-205ENST00000471440 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
CFHR3-205ENST00000471440 E2F4Q16254 413 aa8.4□□□□□ -1.06
CFHR3-205ENST00000471440 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
CFHR3-205ENST00000471440 PBX2P40425 430 aa8.39□□□□□ -1.07
CFHR3-205ENST00000471440 CAMK2BQ13554 666 aa8.39□□□□□ -1.07
CFHR3-205ENST00000471440 UPF1Q92900 1129 aaKnown RBP eCLIP8.39□□□□□ -1.07
CFHR3-205ENST00000471440 EMILIN3Q9NT22 766 aa8.39□□□□□ -1.07
CFHR3-205ENST00000471440 SLC34A2O95436 690 aa8.38□□□□□ -1.07
CFHR3-205ENST00000471440 LSM11P83369 360 aaKnown RBP eCLIP8.38□□□□□ -1.07
CFHR3-205ENST00000471440 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
CFHR3-205ENST00000471440 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
CFHR3-205ENST00000471440 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
CFHR3-205ENST00000471440 OXER1Q8TDS5 423 aa8.35□□□□□ -1.07
CFHR3-205ENST00000471440 PTCD2Q8WV60 388 aaKnown RBP8.35□□□□□ -1.07
CFHR3-205ENST00000471440 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
CFHR3-205ENST00000471440 P3H3Q8IVL6 736 aa8.35□□□□□ -1.07
CFHR3-205ENST00000471440 PCDHGA4Q9Y5G9 962 aa8.34□□□□□ -1.07
CFHR3-205ENST00000471440 DPYSL4O14531 572 aa8.33□□□□□ -1.08
CFHR3-205ENST00000471440 KHSRPQ92945 711 aaKnown RBP eCLIP8.33□□□□□ -1.08
CFHR3-205ENST00000471440 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
CFHR3-205ENST00000471440 SUPT5HO00267 1087 aaKnown RBP8.3□□□□□ -1.08
CFHR3-205ENST00000471440 TBC1D12O60347 775 aa8.3□□□□□ -1.08
CFHR3-205ENST00000471440 NUDT7P0C024 238 aa8.3□□□□□ -1.08
CFHR3-205ENST00000471440 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
CFHR3-205ENST00000471440 ABCC9O60706 1549 aa8.3□□□□□ -1.08
CFHR3-205ENST00000471440 ARHGEF1Q92888 912 aaKnown RBP8.29□□□□□ -1.08
CFHR3-205ENST00000471440 ARIH1Q9Y4X5 557 aaPredicted RBP8.29□□□□□ -1.08
CFHR3-205ENST00000471440 EVI5O60447 810 aa8.27□□□□□ -1.09
CFHR3-205ENST00000471440 PDIA6Q15084 440 aa8.27□□□□□ -1.09
CFHR3-205ENST00000471440 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
CFHR3-205ENST00000471440 PSDA5PKW4 1024 aaPredicted RBP8.25□□□□□ -1.09
CFHR3-205ENST00000471440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms