RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 MYO5CQ9NQX4 1742 aa15.41■□□□□ 0.06
POLR1A-206ENST00000471427 AFAP1Q8N556 730 aa15.41■□□□□ 0.06
POLR1A-206ENST00000471427 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
POLR1A-206ENST00000471427 ARHGAP5Q13017 1502 aa15.39■□□□□ 0.05
POLR1A-206ENST00000471427 ARHGEF40Q8TER5 1519 aa15.39■□□□□ 0.05
POLR1A-206ENST00000471427 ADAMTSL3P82987 1691 aa15.39■□□□□ 0.05
POLR1A-206ENST00000471427 YEATS2Q9ULM3 1422 aa15.39■□□□□ 0.05
POLR1A-206ENST00000471427 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
POLR1A-206ENST00000471427 ZNF518AQ6AHZ1 1483 aa15.38■□□□□ 0.05
POLR1A-206ENST00000471427 ZFYVE16Q7Z3T8 1539 aa15.38■□□□□ 0.05
POLR1A-206ENST00000471427 ATP10AO60312 1499 aa15.37■□□□□ 0.05
POLR1A-206ENST00000471427 PTPRMP28827 1452 aa15.36■□□□□ 0.05
POLR1A-206ENST00000471427 CDC42BPBQ9Y5S2 1711 aa15.35■□□□□ 0.05
POLR1A-206ENST00000471427 GPATCH8Q9UKJ3 1502 aaKnown RBP15.35■□□□□ 0.05
POLR1A-206ENST00000471427 BCORL1Q5H9F3 1711 aa15.34■□□□□ 0.05
POLR1A-206ENST00000471427 MTUS2Q5JR59 1369 aa15.34■□□□□ 0.05
POLR1A-206ENST00000471427 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.05
POLR1A-206ENST00000471427 KDM5CP41229 1560 aa15.33■□□□□ 0.05
POLR1A-206ENST00000471427 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
POLR1A-206ENST00000471427 CFDP1Q9UEE9 299 aaPredicted RBP15.32■□□□□ 0.04
POLR1A-206ENST00000471427 C9orf84Q5VXU9 1444 aa15.32■□□□□ 0.04
POLR1A-206ENST00000471427 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
POLR1A-206ENST00000471427 TRAPPC8Q9Y2L5 1435 aa15.32■□□□□ 0.04
POLR1A-206ENST00000471427 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
POLR1A-206ENST00000471427 CCNB3Q8WWL7 1395 aa15.31■□□□□ 0.04
POLR1A-206ENST00000471427 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
POLR1A-206ENST00000471427 ZNF777Q9ULD5 760 aaPredicted RBP15.29■□□□□ 0.04
POLR1A-206ENST00000471427 CDC42BPAQ5VT25 1732 aa15.29■□□□□ 0.04
POLR1A-206ENST00000471427 ABCC1P33527 1531 aa15.28■□□□□ 0.04
POLR1A-206ENST00000471427 HNRNPMP52272 730 aaKnown RBP eCLIP15.28■□□□□ 0.04
POLR1A-206ENST00000471427 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
POLR1A-206ENST00000471427 MLECQ14165 292 aa15.27■□□□□ 0.04
POLR1A-206ENST00000471427 MADDQ8WXG6 1647 aa15.27■□□□□ 0.03
POLR1A-206ENST00000471427 HECW2Q9P2P5 1572 aa15.27■□□□□ 0.03
POLR1A-206ENST00000471427 REREQ9P2R6 1566 aa15.26■□□□□ 0.03
POLR1A-206ENST00000471427 SIGLEC1Q9BZZ2 1709 aa15.25■□□□□ 0.03
POLR1A-206ENST00000471427 VPS8Q8N3P4 1428 aa15.25■□□□□ 0.03
POLR1A-206ENST00000471427 SPAG9O60271 1321 aaKnown RBP15.24■□□□□ 0.03
POLR1A-206ENST00000471427 RSPH4AQ5TD94 716 aa15.24■□□□□ 0.03
POLR1A-206ENST00000471427 AGLP35573 1532 aa15.23■□□□□ 0.03
POLR1A-206ENST00000471427 EHBP1L1Q8N3D4 1523 aa15.23■□□□□ 0.03
POLR1A-206ENST00000471427 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
POLR1A-206ENST00000471427 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
POLR1A-206ENST00000471427 DIP2CQ9Y2E4 1556 aa15.22■□□□□ 0.03
POLR1A-206ENST00000471427 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
POLR1A-206ENST00000471427 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
POLR1A-206ENST00000471427 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
POLR1A-206ENST00000471427 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
POLR1A-206ENST00000471427 KIDINS220Q9ULH0 1771 aa15.19■□□□□ 0.02
POLR1A-206ENST00000471427 SYCP2Q9BX26 1530 aa15.19■□□□□ 0.02
POLR1A-206ENST00000471427 NCOA2Q15596 1464 aa15.18■□□□□ 0.02
POLR1A-206ENST00000471427 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
POLR1A-206ENST00000471427 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
POLR1A-206ENST00000471427 ABCA6Q8N139 1617 aa15.17■□□□□ 0.02
POLR1A-206ENST00000471427 LRRC9Q6ZRR7 1453 aa15.17■□□□□ 0.02
POLR1A-206ENST00000471427 LMTK3Q96Q04 1460 aa15.17■□□□□ 0.02
POLR1A-206ENST00000471427 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
POLR1A-206ENST00000471427 CEBPAP49715 358 aaPredicted RBP15.16■□□□□ 0.02
POLR1A-206ENST00000471427 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
POLR1A-206ENST00000471427 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
POLR1A-206ENST00000471427 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
POLR1A-206ENST00000471427 FER1L4A9Z1Z3 1794 aa15.15■□□□□ 0.02
POLR1A-206ENST00000471427 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
POLR1A-206ENST00000471427 CNTLNQ9NXG0 1405 aa15.14■□□□□ 0.01
POLR1A-206ENST00000471427 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
POLR1A-206ENST00000471427 ATP7AQ04656 1500 aa15.13■□□□□ 0.01
POLR1A-206ENST00000471427 A2MP01023 1474 aa15.12■□□□□ 0.01
POLR1A-206ENST00000471427 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
POLR1A-206ENST00000471427 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
POLR1A-206ENST00000471427 HSPA2P54652 639 aa15.11■□□□□ 0.01
POLR1A-206ENST00000471427 APLP2Q06481 763 aa15.11■□□□□ 0.01
POLR1A-206ENST00000471427 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
POLR1A-206ENST00000471427 INO80Q9ULG1 1556 aaPredicted RBP15.1■□□□□ 0.01
POLR1A-206ENST00000471427 ZMYM3Q14202 1370 aa15.09■□□□□ 0.01
POLR1A-206ENST00000471427 MIA2Q96PC5 1412 aa15.09■□□□□ 0.01
POLR1A-206ENST00000471427 PLXNC1O60486 1568 aa15.08■□□□□ 0
POLR1A-206ENST00000471427 CAMSAP2Q08AD1 1489 aa15.08■□□□□ 0
POLR1A-206ENST00000471427 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
POLR1A-206ENST00000471427 GGT6Q6P531 493 aa15.07■□□□□ 0
POLR1A-206ENST00000471427 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
POLR1A-206ENST00000471427 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
POLR1A-206ENST00000471427 NPATQ14207 1427 aa15.05■□□□□ -0
POLR1A-206ENST00000471427 MYOM3Q5VTT5 1437 aa15.05■□□□□ -0
POLR1A-206ENST00000471427 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
POLR1A-206ENST00000471427 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
POLR1A-206ENST00000471427 ADGBQ8N7X0 1667 aa15.03■□□□□ -0
POLR1A-206ENST00000471427 KIF3BO15066 747 aa15.03■□□□□ -0
POLR1A-206ENST00000471427 C3P01024 1663 aa15.02□□□□□ -0.01
POLR1A-206ENST00000471427 PREX1Q8TCU6 1659 aa15.02□□□□□ -0.01
POLR1A-206ENST00000471427 MROH2AA6NES4 1674 aa15□□□□□ -0.01
POLR1A-206ENST00000471427 PTPRKQ15262 1439 aa14.98□□□□□ -0.01
POLR1A-206ENST00000471427 FBXO41Q8TF61 875 aa14.97□□□□□ -0.01
POLR1A-206ENST00000471427 MAST1Q9Y2H9 1570 aa14.97□□□□□ -0.01
POLR1A-206ENST00000471427 WASHC2CQ9Y4E1 1318 aa14.96□□□□□ -0.01
POLR1A-206ENST00000471427 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
POLR1A-206ENST00000471427 PTPRTO14522 1441 aa14.93□□□□□ -0.02
POLR1A-206ENST00000471427 ABCC5O15440 1437 aa14.93□□□□□ -0.02
POLR1A-206ENST00000471427 TCOF1Q13428 1488 aaKnown RBP14.93□□□□□ -0.02
POLR1A-206ENST00000471427 CLTCQ00610 1675 aaKnown RBP14.93□□□□□ -0.02
POLR1A-206ENST00000471427 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms