RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 DCAF8L2P0C7V8 631 aa9.43□□□□□ -0.9
COPS3-206ENST00000471414 POTEGQ6S5H5 508 aa9.43□□□□□ -0.9
COPS3-206ENST00000471414 C2orf72A6NCS6 295 aa9.4□□□□□ -0.9
COPS3-206ENST00000471414 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
COPS3-206ENST00000471414 DOK7Q18PE1 504 aa9.37□□□□□ -0.91
COPS3-206ENST00000471414 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
COPS3-206ENST00000471414 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
COPS3-206ENST00000471414 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
COPS3-206ENST00000471414 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
COPS3-206ENST00000471414 CRISPLD2Q9H0B8 497 aa9.33□□□□□ -0.92
COPS3-206ENST00000471414 SLC34A2O95436 690 aa9.32□□□□□ -0.92
COPS3-206ENST00000471414 FOXK1P85037 733 aa9.32□□□□□ -0.92
COPS3-206ENST00000471414 GPR153Q6NV75 609 aa9.32□□□□□ -0.92
COPS3-206ENST00000471414 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
COPS3-206ENST00000471414 MARVELD3Q96A59 401 aa9.31□□□□□ -0.92
COPS3-206ENST00000471414 PCDH10Q9P2E7 1040 aa9.31□□□□□ -0.92
COPS3-206ENST00000471414 RIMBP2O15034 1052 aa9.29□□□□□ -0.92
COPS3-206ENST00000471414 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
COPS3-206ENST00000471414 POTEB3A0JP26 581 aa9.28□□□□□ -0.92
COPS3-206ENST00000471414 DSG2Q14126 1118 aa9.28□□□□□ -0.92
COPS3-206ENST00000471414 POTEBQ6S5H4 581 aa9.28□□□□□ -0.92
COPS3-206ENST00000471414 EMP3P54852 163 aa9.27□□□□□ -0.93
COPS3-206ENST00000471414 CADPS2Q86UW7 1296 aa9.26□□□□□ -0.93
COPS3-206ENST00000471414 MFSD10Q14728 455 aa9.25□□□□□ -0.93
COPS3-206ENST00000471414 KDM4FA0A1W2PPD8 638 aa9.24□□□□□ -0.93
COPS3-206ENST00000471414 CDAN1Q8IWY9 1227 aa9.24□□□□□ -0.93
COPS3-206ENST00000471414 PLPP6Q8IY26 295 aa9.24□□□□□ -0.93
COPS3-206ENST00000471414 ARSIQ5FYB1 569 aa9.23□□□□□ -0.93
COPS3-206ENST00000471414 SPRYD3Q8NCJ5 442 aa9.23□□□□□ -0.93
COPS3-206ENST00000471414 PTCD2Q8WV60 388 aaKnown RBP9.23□□□□□ -0.93
COPS3-206ENST00000471414 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
COPS3-206ENST00000471414 PDE4AP27815 886 aa9.22□□□□□ -0.93
COPS3-206ENST00000471414 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.22□□□□□ -0.93
COPS3-206ENST00000471414 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
COPS3-206ENST00000471414 PPP1R15BQ5SWA1 713 aa9.21□□□□□ -0.94
COPS3-206ENST00000471414 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.94
COPS3-206ENST00000471414 FAM205CA6NFA0 338 aa9.2□□□□□ -0.94
COPS3-206ENST00000471414 OXER1Q8TDS5 423 aa9.18□□□□□ -0.94
COPS3-206ENST00000471414 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
COPS3-206ENST00000471414 LARP6Q9BRS8 491 aaKnown RBP9.17□□□□□ -0.94
COPS3-206ENST00000471414 ERBB3P21860 1342 aa9.16□□□□□ -0.94
COPS3-206ENST00000471414 PAXIP1Q6ZW49 1069 aaPredicted RBP9.16□□□□□ -0.94
COPS3-206ENST00000471414 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
COPS3-206ENST00000471414 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
COPS3-206ENST00000471414 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.94
COPS3-206ENST00000471414 NUDT7P0C024 238 aa9.15□□□□□ -0.94
COPS3-206ENST00000471414 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
COPS3-206ENST00000471414 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
COPS3-206ENST00000471414 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
COPS3-206ENST00000471414 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
COPS3-206ENST00000471414 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
COPS3-206ENST00000471414 EMILIN3Q9NT22 766 aa9.1□□□□□ -0.95
COPS3-206ENST00000471414 TBC1D12O60347 775 aa9.09□□□□□ -0.95
COPS3-206ENST00000471414 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
COPS3-206ENST00000471414 POTEEQ6S8J3 1075 aa9.06□□□□□ -0.96
COPS3-206ENST00000471414 UPF1Q92900 1129 aaKnown RBP eCLIP9.06□□□□□ -0.96
COPS3-206ENST00000471414 PSDA5PKW4 1024 aaPredicted RBP9.05□□□□□ -0.96
COPS3-206ENST00000471414 SPNS2Q8IVW8 549 aa9.04□□□□□ -0.96
COPS3-206ENST00000471414 EVI5O60447 810 aa9.01□□□□□ -0.97
COPS3-206ENST00000471414 PBX2P40425 430 aa9.01□□□□□ -0.97
COPS3-206ENST00000471414 TSHZ2Q9NRE2 1034 aa9.01□□□□□ -0.97
COPS3-206ENST00000471414 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
COPS3-206ENST00000471414 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
COPS3-206ENST00000471414 FOSBP53539 338 aa8.99□□□□□ -0.97
COPS3-206ENST00000471414 PLCB2Q00722 1185 aa8.99□□□□□ -0.97
COPS3-206ENST00000471414 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
COPS3-206ENST00000471414 PPP4R3BQ5MIZ7 849 aa8.97□□□□□ -0.97
COPS3-206ENST00000471414 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
COPS3-206ENST00000471414 DPYSL4O14531 572 aa8.96□□□□□ -0.98
COPS3-206ENST00000471414 LSM11P83369 360 aaKnown RBP eCLIP8.96□□□□□ -0.98
COPS3-206ENST00000471414 MMRN1Q13201 1228 aa8.96□□□□□ -0.98
COPS3-206ENST00000471414 E2F4Q16254 413 aa8.96□□□□□ -0.98
COPS3-206ENST00000471414 ARHGAP33O14559 1287 aa8.94□□□□□ -0.98
COPS3-206ENST00000471414 PDIA6Q15084 440 aa8.94□□□□□ -0.98
COPS3-206ENST00000471414 AXIN2Q9Y2T1 843 aa8.94□□□□□ -0.98
COPS3-206ENST00000471414 PTGER2P43116 358 aa8.93□□□□□ -0.98
COPS3-206ENST00000471414 ZNF454Q8N9F8 522 aa8.93□□□□□ -0.98
COPS3-206ENST00000471414 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
COPS3-206ENST00000471414 PCDHGA10Q9Y5H3 936 aa8.92□□□□□ -0.98
COPS3-206ENST00000471414 PHF14O94880 888 aa8.9□□□□□ -0.98
COPS3-206ENST00000471414 PSEN2P49810 448 aa8.9□□□□□ -0.98
COPS3-206ENST00000471414 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
COPS3-206ENST00000471414 WDR70Q9NW82 654 aa8.9□□□□□ -0.98
COPS3-206ENST00000471414 SPDYE16A6NNV3 312 aaPredicted RBP8.89□□□□□ -0.99
COPS3-206ENST00000471414 ZDHHC16Q969W1 377 aa8.89□□□□□ -0.99
COPS3-206ENST00000471414 ADAM33Q9BZ11 813 aa8.89□□□□□ -0.99
COPS3-206ENST00000471414 TK2O00142 265 aa8.88□□□□□ -0.99
COPS3-206ENST00000471414 HRO43593 1189 aa8.87□□□□□ -0.99
COPS3-206ENST00000471414 ANKRD13DQ6ZTN6 518 aa8.87□□□□□ -0.99
COPS3-206ENST00000471414 TYW1BQ6NUM6 668 aa8.86□□□□□ -0.99
COPS3-206ENST00000471414 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
COPS3-206ENST00000471414 KCNV2Q8TDN2 545 aa8.86□□□□□ -0.99
COPS3-206ENST00000471414 FBXW7Q969H0 707 aa8.86□□□□□ -0.99
COPS3-206ENST00000471414 KCNK17Q96T54 332 aa8.86□□□□□ -0.99
COPS3-206ENST00000471414 SLC4A5Q9BY07 1137 aa8.86□□□□□ -0.99
COPS3-206ENST00000471414 PTPREP23469 700 aa8.85□□□□□ -0.99
COPS3-206ENST00000471414 EPAS1Q99814 870 aa8.85□□□□□ -0.99
COPS3-206ENST00000471414 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
COPS3-206ENST00000471414 ZBED2Q9BTP6 218 aa8.82□□□□□ -1
COPS3-206ENST00000471414 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms