RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
TRIM59-204ENST00000471396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM59-204ENST00000471396 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
TRIM59-204ENST00000471396 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
TRIM59-204ENST00000471396 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
TRIM59-204ENST00000471396 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
TRIM59-204ENST00000471396 KIF14Q15058 1648 aa12.3□□□□□ -0.44
TRIM59-204ENST00000471396 NEO1Q92859 1461 aa12.29□□□□□ -0.44
TRIM59-204ENST00000471396 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
TRIM59-204ENST00000471396 PHLDB1Q86UU1 1377 aa12.29□□□□□ -0.44
TRIM59-204ENST00000471396 CFAP74Q9C0B2 1584 aa12.28□□□□□ -0.44
TRIM59-204ENST00000471396 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.44
TRIM59-204ENST00000471396 FANCAO15360 1455 aa12.26□□□□□ -0.45
TRIM59-204ENST00000471396 MYO5CQ9NQX4 1742 aa12.25□□□□□ -0.45
TRIM59-204ENST00000471396 PLCH2O75038 1416 aa12.24□□□□□ -0.45
TRIM59-204ENST00000471396 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
TRIM59-204ENST00000471396 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
TRIM59-204ENST00000471396 PREX2Q70Z35 1606 aa12.21□□□□□ -0.46
TRIM59-204ENST00000471396 FRMPD1Q5SYB0 1578 aa12.21□□□□□ -0.46
TRIM59-204ENST00000471396 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.46
TRIM59-204ENST00000471396 ARHGAP5Q13017 1502 aa12.2□□□□□ -0.46
TRIM59-204ENST00000471396 DENND4BO75064 1496 aaPredicted RBP12.2□□□□□ -0.46
TRIM59-204ENST00000471396 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
TRIM59-204ENST00000471396 RICTORQ6R327 1708 aa12.19□□□□□ -0.46
TRIM59-204ENST00000471396 ADGRL1O94910 1474 aa12.19□□□□□ -0.46
TRIM59-204ENST00000471396 TIAM1Q13009 1591 aa12.18□□□□□ -0.46
TRIM59-204ENST00000471396 EFCAB2Q5VUJ9 269 aa12.18□□□□□ -0.46
TRIM59-204ENST00000471396 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
TRIM59-204ENST00000471396 CDC42BPBQ9Y5S2 1711 aa12.17□□□□□ -0.46
TRIM59-204ENST00000471396 RAPGEF3O95398 923 aa12.17□□□□□ -0.46
TRIM59-204ENST00000471396 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
TRIM59-204ENST00000471396 POGZQ7Z3K3 1410 aa12.16□□□□□ -0.46
TRIM59-204ENST00000471396 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.46
TRIM59-204ENST00000471396 MAP3K1Q13233 1512 aa12.15□□□□□ -0.46
TRIM59-204ENST00000471396 ARHGEF40Q8TER5 1519 aa12.15□□□□□ -0.46
TRIM59-204ENST00000471396 ABCC1P33527 1531 aa12.14□□□□□ -0.47
TRIM59-204ENST00000471396 GPATCH8Q9UKJ3 1502 aaKnown RBP12.14□□□□□ -0.47
TRIM59-204ENST00000471396 SUPT6HQ7KZ85 1726 aaKnown RBP12.13□□□□□ -0.47
TRIM59-204ENST00000471396 CCNB3Q8WWL7 1395 aa12.13□□□□□ -0.47
TRIM59-204ENST00000471396 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
TRIM59-204ENST00000471396 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
TRIM59-204ENST00000471396 ITSN2Q9NZM3 1697 aa12.12□□□□□ -0.47
TRIM59-204ENST00000471396 ZFYVE16Q7Z3T8 1539 aa12.11□□□□□ -0.47
TRIM59-204ENST00000471396 KDM5CP41229 1560 aa12.11□□□□□ -0.47
TRIM59-204ENST00000471396 SAMD9LQ8IVG5 1584 aa12.11□□□□□ -0.47
TRIM59-204ENST00000471396 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
TRIM59-204ENST00000471396 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
TRIM59-204ENST00000471396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■■■□ 21.5
TRIM59-204ENST00000471396 ARHGEF12Q9NZN5 1544 aa12.09□□□□□ -0.47
TRIM59-204ENST00000471396 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
TRIM59-204ENST00000471396 PLEKHH2Q8IVE3 1493 aa12.08□□□□□ -0.47
TRIM59-204ENST00000471396 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
TRIM59-204ENST00000471396 KDM4FA0A1W2PPD8 638 aa12.08□□□□□ -0.48
TRIM59-204ENST00000471396 CFDP1Q9UEE9 299 aaPredicted RBP12.08□□□□□ -0.48
TRIM59-204ENST00000471396 HECW2Q9P2P5 1572 aa12.08□□□□□ -0.48
TRIM59-204ENST00000471396 C1QBPQ07021 282 aaKnown RBP12.07□□□□□ -0.48
TRIM59-204ENST00000471396 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
TRIM59-204ENST00000471396 TRAPPC8Q9Y2L5 1435 aa12.07□□□□□ -0.48
TRIM59-204ENST00000471396 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
TRIM59-204ENST00000471396 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
TRIM59-204ENST00000471396 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
TRIM59-204ENST00000471396 APLP2Q06481 763 aa12.05□□□□□ -0.48
TRIM59-204ENST00000471396 MLH3Q9UHC1 1453 aa12.05□□□□□ -0.48
TRIM59-204ENST00000471396 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
TRIM59-204ENST00000471396 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
TRIM59-204ENST00000471396 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
TRIM59-204ENST00000471396 ATP10AO60312 1499 aa12.03□□□□□ -0.48
TRIM59-204ENST00000471396 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
TRIM59-204ENST00000471396 ABCA6Q8N139 1617 aa12.03□□□□□ -0.48
TRIM59-204ENST00000471396 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
TRIM59-204ENST00000471396 CAMSAP2Q08AD1 1489 aa12.02□□□□□ -0.48
TRIM59-204ENST00000471396 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
TRIM59-204ENST00000471396 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.49
TRIM59-204ENST00000471396 SIGLEC1Q9BZZ2 1709 aa12.02□□□□□ -0.49
TRIM59-204ENST00000471396 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
TRIM59-204ENST00000471396 KIDINS220Q9ULH0 1771 aa12.01□□□□□ -0.49
TRIM59-204ENST00000471396 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
TRIM59-204ENST00000471396 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
TRIM59-204ENST00000471396 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
TRIM59-204ENST00000471396 MBD5Q9P267 1494 aa12.01□□□□□ -0.49
TRIM59-204ENST00000471396 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
TRIM59-204ENST00000471396 HNRNPMP52272 730 aaKnown RBP eCLIP12□□□□□ -0.49
TRIM59-204ENST00000471396 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
TRIM59-204ENST00000471396 ATP7AQ04656 1500 aa12□□□□□ -0.49
TRIM59-204ENST00000471396 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
TRIM59-204ENST00000471396 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
TRIM59-204ENST00000471396 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
TRIM59-204ENST00000471396 MADDQ8WXG6 1647 aa11.99□□□□□ -0.49
TRIM59-204ENST00000471396 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
TRIM59-204ENST00000471396 AGLP35573 1532 aa11.96□□□□□ -0.49
TRIM59-204ENST00000471396 PTPRMP28827 1452 aa11.95□□□□□ -0.5
TRIM59-204ENST00000471396 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
TRIM59-204ENST00000471396 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
TRIM59-204ENST00000471396 PLXNC1O60486 1568 aa11.94□□□□□ -0.5
TRIM59-204ENST00000471396 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
TRIM59-204ENST00000471396 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
TRIM59-204ENST00000471396 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
TRIM59-204ENST00000471396 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
TRIM59-204ENST00000471396 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
TRIM59-204ENST00000471396 A2MP01023 1474 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms