RNA–Protein interactions for RNA: ENST00000471358.1

PCBP4-209, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-209ENST00000471358 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
PCBP4-209ENST00000471358 ZFYVE16Q7Z3T8 1539 aa27.91■■■□□ 2.06
PCBP4-209ENST00000471358 MADDQ8WXG6 1647 aa27.9■■■□□ 2.06
PCBP4-209ENST00000471358 CLIP1P30622 1438 aa27.9■■■□□ 2.06
PCBP4-209ENST00000471358 MYO5CQ9NQX4 1742 aa27.89■■■□□ 2.06
PCBP4-209ENST00000471358 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
PCBP4-209ENST00000471358 PCF11O94913 1555 aaKnown RBP27.88■■■□□ 2.05
PCBP4-209ENST00000471358 ARHGAP5Q13017 1502 aa27.85■■■□□ 2.05
PCBP4-209ENST00000471358 SIGLEC1Q9BZZ2 1709 aa27.84■■■□□ 2.05
PCBP4-209ENST00000471358 AFAP1Q8N556 730 aa27.84■■■□□ 2.05
PCBP4-209ENST00000471358 MLECQ14165 292 aa27.83■■■□□ 2.05
PCBP4-209ENST00000471358 ILDR1Q86SU0 546 aaPredicted RBP27.83■■■□□ 2.05
PCBP4-209ENST00000471358 CCDC18Q5T9S5 1454 aa27.82■■■□□ 2.04
PCBP4-209ENST00000471358 PLPPR3Q6T4P5 718 aa27.8■■■□□ 2.04
PCBP4-209ENST00000471358 RIMS1Q86UR5 1692 aaKnown RBP27.79■■■□□ 2.04
PCBP4-209ENST00000471358 ATP10AO60312 1499 aa27.78■■■□□ 2.04
PCBP4-209ENST00000471358 FYCO1Q9BQS8 1478 aa27.76■■■□□ 2.04
PCBP4-209ENST00000471358 ZNF518AQ6AHZ1 1483 aa27.76■■■□□ 2.03
PCBP4-209ENST00000471358 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
PCBP4-209ENST00000471358 MYT1LQ9UL68 1186 aa27.73■■■□□ 2.03
PCBP4-209ENST00000471358 C9orf84Q5VXU9 1444 aa27.73■■■□□ 2.03
PCBP4-209ENST00000471358 ARHGEF12Q9NZN5 1544 aa27.7■■■□□ 2.02
PCBP4-209ENST00000471358 LMTK3Q96Q04 1460 aa27.7■■■□□ 2.02
PCBP4-209ENST00000471358 KDM5CP41229 1560 aa27.69■■■□□ 2.02
PCBP4-209ENST00000471358 TRAPPC8Q9Y2L5 1435 aa27.69■■■□□ 2.02
PCBP4-209ENST00000471358 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
PCBP4-209ENST00000471358 HSPA2P54652 639 aa27.65■■■□□ 2.02
PCBP4-209ENST00000471358 ZNF777Q9ULD5 760 aaPredicted RBP27.65■■■□□ 2.02
PCBP4-209ENST00000471358 ABCC1P33527 1531 aa27.64■■■□□ 2.02
PCBP4-209ENST00000471358 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
PCBP4-209ENST00000471358 MLH3Q9UHC1 1453 aa27.63■■■□□ 2.01
PCBP4-209ENST00000471358 FER1L4A9Z1Z3 1794 aa27.62■■■□□ 2.01
PCBP4-209ENST00000471358 DIP2CQ9Y2E4 1556 aa27.61■■■□□ 2.01
PCBP4-209ENST00000471358 CEBPAP49715 358 aaPredicted RBP27.61■■■□□ 2.01
PCBP4-209ENST00000471358 GPATCH8Q9UKJ3 1502 aaKnown RBP27.61■■■□□ 2.01
PCBP4-209ENST00000471358 ABCA6Q8N139 1617 aa27.57■■■□□ 2
PCBP4-209ENST00000471358 ITSN2Q9NZM3 1697 aa27.57■■■□□ 2
PCBP4-209ENST00000471358 HNRNPMP52272 730 aaKnown RBP eCLIP27.57■■■□□ 2
PCBP4-209ENST00000471358 MTUS2Q5JR59 1369 aa27.55■■■□□ 2
PCBP4-209ENST00000471358 CEP162Q5TB80 1403 aa27.54■■■□□ 2
PCBP4-209ENST00000471358 SAMD9LQ8IVG5 1584 aa27.54■■■□□ 2
PCBP4-209ENST00000471358 CFDP1Q9UEE9 299 aaPredicted RBP27.54■■■□□ 2
PCBP4-209ENST00000471358 REREQ9P2R6 1566 aa27.52■■■□□ 2
PCBP4-209ENST00000471358 CCNB3Q8WWL7 1395 aa27.52■■■□□ 2
PCBP4-209ENST00000471358 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
PCBP4-209ENST00000471358 SYCP2Q9BX26 1530 aa27.49■■□□□ 1.99
PCBP4-209ENST00000471358 SPAG9O60271 1321 aaKnown RBP27.48■■□□□ 1.99
PCBP4-209ENST00000471358 AGLP35573 1532 aa27.47■■□□□ 1.99
PCBP4-209ENST00000471358 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
PCBP4-209ENST00000471358 KIAA1107Q9UPP5 1409 aa27.45■■□□□ 1.98
PCBP4-209ENST00000471358 ZNF644Q9H582 1327 aaPredicted RBP27.44■■□□□ 1.98
PCBP4-209ENST00000471358 ESF1Q9H501 851 aaKnown RBP27.42■■□□□ 1.98
PCBP4-209ENST00000471358 PLEKHH2Q8IVE3 1493 aa27.41■■□□□ 1.98
PCBP4-209ENST00000471358 FBXO41Q8TF61 875 aa27.41■■□□□ 1.98
PCBP4-209ENST00000471358 EHBP1L1Q8N3D4 1523 aa27.38■■□□□ 1.97
PCBP4-209ENST00000471358 TIAM1Q13009 1591 aa27.37■■□□□ 1.97
PCBP4-209ENST00000471358 PREX1Q8TCU6 1659 aa27.36■■□□□ 1.97
PCBP4-209ENST00000471358 ATP7AQ04656 1500 aa27.36■■□□□ 1.97
PCBP4-209ENST00000471358 C3P01024 1663 aa27.34■■□□□ 1.97
PCBP4-209ENST00000471358 SETD1BQ9UPS6 1966 aaKnown RBP27.34■■□□□ 1.97
PCBP4-209ENST00000471358 UHRF1BP1Q6BDS2 1440 aa27.33■■□□□ 1.97
PCBP4-209ENST00000471358 MBD5Q9P267 1494 aa27.32■■□□□ 1.96
PCBP4-209ENST00000471358 INO80Q9ULG1 1556 aaPredicted RBP27.31■■□□□ 1.96
PCBP4-209ENST00000471358 CNTLNQ9NXG0 1405 aa27.31■■□□□ 1.96
PCBP4-209ENST00000471358 A2MP01023 1474 aa27.31■■□□□ 1.96
PCBP4-209ENST00000471358 SUPT6HQ7KZ85 1726 aaKnown RBP27.3■■□□□ 1.96
PCBP4-209ENST00000471358 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
PCBP4-209ENST00000471358 ZMYM3Q14202 1370 aa27.26■■□□□ 1.95
PCBP4-209ENST00000471358 GGT6Q6P531 493 aa27.26■■□□□ 1.95
PCBP4-209ENST00000471358 PLXNC1O60486 1568 aa27.25■■□□□ 1.95
PCBP4-209ENST00000471358 VPS8Q8N3P4 1428 aa27.24■■□□□ 1.95
PCBP4-209ENST00000471358 CERKQ8TCT0 537 aa27.23■■□□□ 1.95
PCBP4-209ENST00000471358 STRCQ7RTU9 1775 aa27.22■■□□□ 1.95
PCBP4-209ENST00000471358 DMRT2Q9Y5R5 561 aa27.21■■□□□ 1.95
PCBP4-209ENST00000471358 RTEL1-TNFRSF6BF6WH68 1400 aa27.2■■□□□ 1.94
PCBP4-209ENST00000471358 KANK4Q5T7N3 995 aaPredicted RBP27.18■■□□□ 1.94
PCBP4-209ENST00000471358 CAMSAP2Q08AD1 1489 aa27.18■■□□□ 1.94
PCBP4-209ENST00000471358 NPATQ14207 1427 aa27.17■■□□□ 1.94
PCBP4-209ENST00000471358 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
PCBP4-209ENST00000471358 DHX29Q7Z478 1369 aaKnown RBP27.16■■□□□ 1.94
PCBP4-209ENST00000471358 LRRC9Q6ZRR7 1453 aa27.16■■□□□ 1.94
PCBP4-209ENST00000471358 ADGBQ8N7X0 1667 aa27.16■■□□□ 1.94
PCBP4-209ENST00000471358 CLTCQ00610 1675 aaKnown RBP27.15■■□□□ 1.94
PCBP4-209ENST00000471358 CCDC141Q6ZP82 1450 aa27.15■■□□□ 1.94
PCBP4-209ENST00000471358 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
PCBP4-209ENST00000471358 PPP6R1Q9UPN7 881 aa27.14■■□□□ 1.94
PCBP4-209ENST00000471358 KIF3BO15066 747 aa27.12■■□□□ 1.93
PCBP4-209ENST00000471358 PTPRKQ15262 1439 aa27.11■■□□□ 1.93
PCBP4-209ENST00000471358 PTPRTO14522 1441 aa27.09■■□□□ 1.93
PCBP4-209ENST00000471358 NCOA1Q15788 1441 aa27.08■■□□□ 1.93
PCBP4-209ENST00000471358 TSPY4P0CV99 314 aa27.07■■□□□ 1.92
PCBP4-209ENST00000471358 TSPY10P0CW01 314 aa27.07■■□□□ 1.92
PCBP4-209ENST00000471358 MAP3K1Q13233 1512 aa27.05■■□□□ 1.92
PCBP4-209ENST00000471358 NCKAP5LQ9HCH0 1330 aa27.04■■□□□ 1.92
PCBP4-209ENST00000471358 ARHGEF5Q12774 1597 aa27.04■■□□□ 1.92
PCBP4-209ENST00000471358 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
PCBP4-209ENST00000471358 FBXO31Q5XUX0 539 aaPredicted RBP27.01■■□□□ 1.91
PCBP4-209ENST00000471358 MYO3AQ8NEV4 1616 aa26.98■■□□□ 1.91
PCBP4-209ENST00000471358 WASHC2CQ9Y4E1 1318 aa26.98■■□□□ 1.91
PCBP4-209ENST00000471358 MYOM3Q5VTT5 1437 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms