RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
GTF2B-204ENST00000471296 C2orf72A6NCS6 295 aa13.8□□□□□ -0.2
GTF2B-204ENST00000471296 DOK7Q18PE1 504 aa13.79□□□□□ -0.2
GTF2B-204ENST00000471296 KIF3CO14782 793 aa13.78□□□□□ -0.2
GTF2B-204ENST00000471296 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
GTF2B-204ENST00000471296 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
GTF2B-204ENST00000471296 EMP3P54852 163 aa13.76□□□□□ -0.21
GTF2B-204ENST00000471296 CDAN1Q8IWY9 1227 aa13.74□□□□□ -0.21
GTF2B-204ENST00000471296 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
GTF2B-204ENST00000471296 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
GTF2B-204ENST00000471296 PCDH10Q9P2E7 1040 aa13.72□□□□□ -0.21
GTF2B-204ENST00000471296 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
GTF2B-204ENST00000471296 POTEB3A0JP26 581 aa13.7□□□□□ -0.22
GTF2B-204ENST00000471296 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
GTF2B-204ENST00000471296 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
GTF2B-204ENST00000471296 POTEBQ6S5H4 581 aa13.7□□□□□ -0.22
GTF2B-204ENST00000471296 RYDENQ9NUL5 291 aaKnown RBP13.68□□□□□ -0.22
GTF2B-204ENST00000471296 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
GTF2B-204ENST00000471296 HS3ST6Q96QI5 342 aa13.66□□□□□ -0.22
GTF2B-204ENST00000471296 ARSIQ5FYB1 569 aa13.65□□□□□ -0.22
GTF2B-204ENST00000471296 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.22
GTF2B-204ENST00000471296 ZSWIM6Q9HCJ5 1215 aa13.63□□□□□ -0.23
GTF2B-204ENST00000471296 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
GTF2B-204ENST00000471296 ERBB3P21860 1342 aa13.6□□□□□ -0.23
GTF2B-204ENST00000471296 DSG2Q14126 1118 aa13.58□□□□□ -0.24
GTF2B-204ENST00000471296 FOXK1P85037 733 aa13.57□□□□□ -0.24
GTF2B-204ENST00000471296 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
GTF2B-204ENST00000471296 VARS2Q5ST30 1063 aaKnown RBP13.55□□□□□ -0.24
GTF2B-204ENST00000471296 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
GTF2B-204ENST00000471296 PCDHGA4Q9Y5G9 962 aa13.54□□□□□ -0.24
GTF2B-204ENST00000471296 SLC34A2O95436 690 aa13.53□□□□□ -0.24
GTF2B-204ENST00000471296 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
GTF2B-204ENST00000471296 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
GTF2B-204ENST00000471296 NUDT7P0C024 238 aa13.52□□□□□ -0.25
GTF2B-204ENST00000471296 KRTAP3-3Q9BYR6 98 aa13.51□□□□□ -0.25
GTF2B-204ENST00000471296 KRTAP3-2Q9BYR7 98 aa13.51□□□□□ -0.25
GTF2B-204ENST00000471296 CADPS2Q86UW7 1296 aa13.49□□□□□ -0.25
GTF2B-204ENST00000471296 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
GTF2B-204ENST00000471296 PDE4AP27815 886 aa13.45□□□□□ -0.26
GTF2B-204ENST00000471296 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
GTF2B-204ENST00000471296 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
GTF2B-204ENST00000471296 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
GTF2B-204ENST00000471296 LHX6Q9UPM6 363 aa13.44□□□□□ -0.26
GTF2B-204ENST00000471296 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
GTF2B-204ENST00000471296 UPF1Q92900 1129 aaKnown RBP eCLIP13.41□□□□□ -0.26
GTF2B-204ENST00000471296 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
GTF2B-204ENST00000471296 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
GTF2B-204ENST00000471296 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
GTF2B-204ENST00000471296 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
GTF2B-204ENST00000471296 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
GTF2B-204ENST00000471296 PAXIP1Q6ZW49 1069 aaPredicted RBP13.37□□□□□ -0.27
GTF2B-204ENST00000471296 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
GTF2B-204ENST00000471296 MFSD10Q14728 455 aa13.36□□□□□ -0.27
GTF2B-204ENST00000471296 OXER1Q8TDS5 423 aa13.36□□□□□ -0.27
GTF2B-204ENST00000471296 TBC1D12O60347 775 aa13.34□□□□□ -0.27
GTF2B-204ENST00000471296 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
GTF2B-204ENST00000471296 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
GTF2B-204ENST00000471296 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
GTF2B-204ENST00000471296 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
GTF2B-204ENST00000471296 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
GTF2B-204ENST00000471296 PSDA5PKW4 1024 aaPredicted RBP13.22□□□□□ -0.29
GTF2B-204ENST00000471296 EVI5O60447 810 aa13.21□□□□□ -0.29
GTF2B-204ENST00000471296 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
GTF2B-204ENST00000471296 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.29
GTF2B-204ENST00000471296 PBX2P40425 430 aa13.19□□□□□ -0.3
GTF2B-204ENST00000471296 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
GTF2B-204ENST00000471296 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
GTF2B-204ENST00000471296 PSEN2P49810 448 aa13.17□□□□□ -0.3
GTF2B-204ENST00000471296 CAMK2BQ13554 666 aa13.16□□□□□ -0.3
GTF2B-204ENST00000471296 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
GTF2B-204ENST00000471296 ARHGAP33O14559 1287 aa13.15□□□□□ -0.3
GTF2B-204ENST00000471296 DMRTA1Q5VZB9 504 aa13.14□□□□□ -0.31
GTF2B-204ENST00000471296 DPYSL4O14531 572 aa13.13□□□□□ -0.31
GTF2B-204ENST00000471296 FOSBP53539 338 aa13.13□□□□□ -0.31
GTF2B-204ENST00000471296 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
GTF2B-204ENST00000471296 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
GTF2B-204ENST00000471296 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
GTF2B-204ENST00000471296 JPH4Q96JJ6 628 aa13.09□□□□□ -0.31
GTF2B-204ENST00000471296 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
GTF2B-204ENST00000471296 ADGRD1Q6QNK2 874 aa13.06□□□□□ -0.32
GTF2B-204ENST00000471296 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
GTF2B-204ENST00000471296 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
GTF2B-204ENST00000471296 WDR70Q9NW82 654 aa13.05□□□□□ -0.32
GTF2B-204ENST00000471296 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
GTF2B-204ENST00000471296 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
GTF2B-204ENST00000471296 E2F4Q16254 413 aa13.03□□□□□ -0.32
GTF2B-204ENST00000471296 PTGER2P43116 358 aa13.02□□□□□ -0.33
GTF2B-204ENST00000471296 KCNH8Q96L42 1107 aa13□□□□□ -0.33
GTF2B-204ENST00000471296 TK2O00142 265 aa12.99□□□□□ -0.33
GTF2B-204ENST00000471296 PTPREP23469 700 aa12.99□□□□□ -0.33
GTF2B-204ENST00000471296 DDX12PQ92771 950 aa12.98□□□□□ -0.33
GTF2B-204ENST00000471296 HRO43593 1189 aa12.97□□□□□ -0.33
GTF2B-204ENST00000471296 PHF14O94880 888 aa12.96□□□□□ -0.33
GTF2B-204ENST00000471296 VPS9D1Q9Y2B5 631 aa12.96□□□□□ -0.33
GTF2B-204ENST00000471296 PDIA6Q15084 440 aa12.95□□□□□ -0.34
GTF2B-204ENST00000471296 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
GTF2B-204ENST00000471296 COL9A1P20849 921 aa12.92□□□□□ -0.34
GTF2B-204ENST00000471296 RBM33Q96EV2 1170 aaKnown RBP12.92□□□□□ -0.34
GTF2B-204ENST00000471296 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
GTF2B-204ENST00000471296 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms