RNA–Protein interactions for RNA: ENST00000471042.1

LAMA5-207, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-207ENST00000471042 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
LAMA5-207ENST00000471042 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
LAMA5-207ENST00000471042 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
LAMA5-207ENST00000471042 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
LAMA5-207ENST00000471042 ARHGEF40Q8TER5 1519 aa22.15■■□□□ 1.14
LAMA5-207ENST00000471042 PREX2Q70Z35 1606 aa22.14■■□□□ 1.14
LAMA5-207ENST00000471042 EHBP1L1Q8N3D4 1523 aa22.13■■□□□ 1.13
LAMA5-207ENST00000471042 CDC42BPAQ5VT25 1732 aa22.13■■□□□ 1.13
LAMA5-207ENST00000471042 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
LAMA5-207ENST00000471042 LRRC9Q6ZRR7 1453 aa22.09■■□□□ 1.13
LAMA5-207ENST00000471042 KANK4Q5T7N3 995 aaPredicted RBP22.08■■□□□ 1.13
LAMA5-207ENST00000471042 POGZQ7Z3K3 1410 aa22.07■■□□□ 1.12
LAMA5-207ENST00000471042 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
LAMA5-207ENST00000471042 ADAMTSL3P82987 1691 aa22.06■■□□□ 1.12
LAMA5-207ENST00000471042 ZFYVE16Q7Z3T8 1539 aa22.06■■□□□ 1.12
LAMA5-207ENST00000471042 SCAPERQ9BY12 1400 aa22.06■■□□□ 1.12
LAMA5-207ENST00000471042 MAGI2Q86UL8 1455 aa22.04■■□□□ 1.12
LAMA5-207ENST00000471042 EFCAB2Q5VUJ9 269 aa22.04■■□□□ 1.12
LAMA5-207ENST00000471042 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
LAMA5-207ENST00000471042 SUPT6HQ7KZ85 1726 aaKnown RBP22.03■■□□□ 1.12
LAMA5-207ENST00000471042 SIGLEC1Q9BZZ2 1709 aa22.03■■□□□ 1.12
LAMA5-207ENST00000471042 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.12
LAMA5-207ENST00000471042 KDM5CP41229 1560 aa22.01■■□□□ 1.11
LAMA5-207ENST00000471042 ABCC1P33527 1531 aa22.01■■□□□ 1.11
LAMA5-207ENST00000471042 NCOA2Q15596 1464 aa22■■□□□ 1.11
LAMA5-207ENST00000471042 ZNF518AQ6AHZ1 1483 aa22■■□□□ 1.11
LAMA5-207ENST00000471042 YEATS2Q9ULM3 1422 aa21.98■■□□□ 1.11
LAMA5-207ENST00000471042 HECW2Q9P2P5 1572 aa21.97■■□□□ 1.11
LAMA5-207ENST00000471042 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
LAMA5-207ENST00000471042 GPATCH8Q9UKJ3 1502 aaKnown RBP21.96■■□□□ 1.11
LAMA5-207ENST00000471042 SAMD9LQ8IVG5 1584 aa21.95■■□□□ 1.1
LAMA5-207ENST00000471042 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
LAMA5-207ENST00000471042 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
LAMA5-207ENST00000471042 ZNF777Q9ULD5 760 aaPredicted RBP21.93■■□□□ 1.1
LAMA5-207ENST00000471042 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
LAMA5-207ENST00000471042 RIMS1Q86UR5 1692 aaKnown RBP21.91■■□□□ 1.1
LAMA5-207ENST00000471042 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
LAMA5-207ENST00000471042 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
LAMA5-207ENST00000471042 ATP10AO60312 1499 aa21.9■■□□□ 1.1
LAMA5-207ENST00000471042 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.1
LAMA5-207ENST00000471042 FER1L4A9Z1Z3 1794 aa21.89■■□□□ 1.1
LAMA5-207ENST00000471042 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.1
LAMA5-207ENST00000471042 PTPRMP28827 1452 aa21.89■■□□□ 1.09
LAMA5-207ENST00000471042 SYCP2Q9BX26 1530 aa21.88■■□□□ 1.09
LAMA5-207ENST00000471042 KIDINS220Q9ULH0 1771 aa21.88■■□□□ 1.09
LAMA5-207ENST00000471042 TRAPPC8Q9Y2L5 1435 aa21.88■■□□□ 1.09
LAMA5-207ENST00000471042 REREQ9P2R6 1566 aa21.87■■□□□ 1.09
LAMA5-207ENST00000471042 MLH3Q9UHC1 1453 aa21.87■■□□□ 1.09
LAMA5-207ENST00000471042 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
LAMA5-207ENST00000471042 MYOM3Q5VTT5 1437 aa21.86■■□□□ 1.09
LAMA5-207ENST00000471042 PLEKHH2Q8IVE3 1493 aa21.83■■□□□ 1.08
LAMA5-207ENST00000471042 KIAA1107Q9UPP5 1409 aa21.8■■□□□ 1.08
LAMA5-207ENST00000471042 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
LAMA5-207ENST00000471042 ZNF644Q9H582 1327 aaPredicted RBP21.8■■□□□ 1.08
LAMA5-207ENST00000471042 INO80Q9ULG1 1556 aaPredicted RBP21.79■■□□□ 1.08
LAMA5-207ENST00000471042 HNRNPMP52272 730 aaKnown RBP eCLIP21.77■■□□□ 1.08
LAMA5-207ENST00000471042 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.07
LAMA5-207ENST00000471042 AGLP35573 1532 aa21.76■■□□□ 1.07
LAMA5-207ENST00000471042 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
LAMA5-207ENST00000471042 MYT1LQ9UL68 1186 aa21.76■■□□□ 1.07
LAMA5-207ENST00000471042 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
LAMA5-207ENST00000471042 PTPN23Q9H3S7 1636 aa21.72■■□□□ 1.07
LAMA5-207ENST00000471042 ADGBQ8N7X0 1667 aa21.72■■□□□ 1.07
LAMA5-207ENST00000471042 MLECQ14165 292 aa21.71■■□□□ 1.07
LAMA5-207ENST00000471042 MBD5Q9P267 1494 aa21.71■■□□□ 1.07
LAMA5-207ENST00000471042 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
LAMA5-207ENST00000471042 RSPH4AQ5TD94 716 aa21.69■■□□□ 1.06
LAMA5-207ENST00000471042 SPAG9O60271 1321 aaKnown RBP21.69■■□□□ 1.06
LAMA5-207ENST00000471042 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
LAMA5-207ENST00000471042 TCOF1Q13428 1488 aaKnown RBP21.67■■□□□ 1.06
LAMA5-207ENST00000471042 C3P01024 1663 aa21.66■■□□□ 1.06
LAMA5-207ENST00000471042 CCDC141Q6ZP82 1450 aa21.65■■□□□ 1.06
LAMA5-207ENST00000471042 LMTK3Q96Q04 1460 aa21.65■■□□□ 1.06
LAMA5-207ENST00000471042 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
LAMA5-207ENST00000471042 PREX1Q8TCU6 1659 aa21.64■■□□□ 1.05
LAMA5-207ENST00000471042 TSPY4P0CV99 314 aa21.63■■□□□ 1.05
LAMA5-207ENST00000471042 TSPY10P0CW01 314 aa21.63■■□□□ 1.05
LAMA5-207ENST00000471042 MROH2AA6NES4 1674 aa21.63■■□□□ 1.05
LAMA5-207ENST00000471042 A2MP01023 1474 aa21.62■■□□□ 1.05
LAMA5-207ENST00000471042 RTEL1-TNFRSF6BF6WH68 1400 aa21.61■■□□□ 1.05
LAMA5-207ENST00000471042 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
LAMA5-207ENST00000471042 DAPK1P53355 1430 aa21.57■■□□□ 1.04
LAMA5-207ENST00000471042 RRBP1Q9P2E9 1410 aaKnown RBP21.57■■□□□ 1.04
LAMA5-207ENST00000471042 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
LAMA5-207ENST00000471042 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
LAMA5-207ENST00000471042 DNMT1P26358 1616 aaKnown RBP21.56■■□□□ 1.04
LAMA5-207ENST00000471042 ABCC5O15440 1437 aa21.55■■□□□ 1.04
LAMA5-207ENST00000471042 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
LAMA5-207ENST00000471042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
LAMA5-207ENST00000471042 MAST1Q9Y2H9 1570 aa21.55■■□□□ 1.04
LAMA5-207ENST00000471042 ITGAEP38570 1179 aa21.53■■□□□ 1.04
LAMA5-207ENST00000471042 CROCC2H7BZ55 1655 aa21.53■■□□□ 1.04
LAMA5-207ENST00000471042 CHIC2Q9UKJ5 165 aa21.52■■□□□ 1.04
LAMA5-207ENST00000471042 SHANK2Q9UPX8 1470 aa21.52■■□□□ 1.03
LAMA5-207ENST00000471042 CEBPAP49715 358 aaPredicted RBP21.51■■□□□ 1.03
LAMA5-207ENST00000471042 ESF1Q9H501 851 aaKnown RBP21.5■■□□□ 1.03
LAMA5-207ENST00000471042 DHX29Q7Z478 1369 aaKnown RBP21.48■■□□□ 1.03
LAMA5-207ENST00000471042 ANKRD30AQ9BXX3 1397 aa21.46■■□□□ 1.03
LAMA5-207ENST00000471042 UHRF1BP1Q6BDS2 1440 aa21.45■■□□□ 1.02
LAMA5-207ENST00000471042 RRP7BPQ9NSQ0 103 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms