RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-208ENST00000470980 PLEKHD1A6NEE1 506 aa14.11□□□□□ -0.15
GREB1-208ENST00000470980 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
GREB1-208ENST00000470980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.1□□□□□ -0.15
GREB1-208ENST00000470980 RRBP1Q9P2E9 1410 aaKnown RBP14.09□□□□□ -0.15
GREB1-208ENST00000470980 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
GREB1-208ENST00000470980 PTPRMP28827 1452 aa14.09□□□□□ -0.15
GREB1-208ENST00000470980 RICTORQ6R327 1708 aa14.09□□□□□ -0.15
GREB1-208ENST00000470980 ILDR1Q86SU0 546 aaPredicted RBP14.08□□□□□ -0.16
GREB1-208ENST00000470980 CFAP74Q9C0B2 1584 aa14.08□□□□□ -0.16
GREB1-208ENST00000470980 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.16
GREB1-208ENST00000470980 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
GREB1-208ENST00000470980 BCORL1Q5H9F3 1711 aa14.07□□□□□ -0.16
GREB1-208ENST00000470980 FANCAO15360 1455 aa14.07□□□□□ -0.16
GREB1-208ENST00000470980 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
GREB1-208ENST00000470980 ZMYM4Q5VZL5 1548 aa14.07□□□□□ -0.16
GREB1-208ENST00000470980 ARHGEF40Q8TER5 1519 aa14.06□□□□□ -0.16
GREB1-208ENST00000470980 SUPT6HQ7KZ85 1726 aaKnown RBP14.06□□□□□ -0.16
GREB1-208ENST00000470980 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
GREB1-208ENST00000470980 TTC37Q6PGP7 1564 aa14.05□□□□□ -0.16
GREB1-208ENST00000470980 PLCH2O75038 1416 aa14.04□□□□□ -0.16
GREB1-208ENST00000470980 MAGI2Q86UL8 1455 aa14.04□□□□□ -0.16
GREB1-208ENST00000470980 MADDQ8WXG6 1647 aa14.02□□□□□ -0.16
GREB1-208ENST00000470980 FAM50AQ14320 339 aaKnown RBP14.02□□□□□ -0.17
GREB1-208ENST00000470980 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
GREB1-208ENST00000470980 MYOM3Q5VTT5 1437 aa14□□□□□ -0.17
GREB1-208ENST00000470980 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
GREB1-208ENST00000470980 ITGAEP38570 1179 aa13.99□□□□□ -0.17
GREB1-208ENST00000470980 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
GREB1-208ENST00000470980 ZFYVE16Q7Z3T8 1539 aa13.98□□□□□ -0.17
GREB1-208ENST00000470980 LMTK3Q96Q04 1460 aa13.98□□□□□ -0.17
GREB1-208ENST00000470980 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
GREB1-208ENST00000470980 HRCP23327 699 aa13.97□□□□□ -0.17
GREB1-208ENST00000470980 SIGLEC1Q9BZZ2 1709 aa13.97□□□□□ -0.17
GREB1-208ENST00000470980 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.18
GREB1-208ENST00000470980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.95□□□□□ -0.18
GREB1-208ENST00000470980 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
GREB1-208ENST00000470980 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
GREB1-208ENST00000470980 RIMS1Q86UR5 1692 aaKnown RBP13.93□□□□□ -0.18
GREB1-208ENST00000470980 KIF14Q15058 1648 aa13.93□□□□□ -0.18
GREB1-208ENST00000470980 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
GREB1-208ENST00000470980 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
GREB1-208ENST00000470980 PTPN23Q9H3S7 1636 aa13.92□□□□□ -0.18
GREB1-208ENST00000470980 ATP10AO60312 1499 aa13.92□□□□□ -0.18
GREB1-208ENST00000470980 KDM5CP41229 1560 aa13.92□□□□□ -0.18
GREB1-208ENST00000470980 MIA2Q96PC5 1412 aa13.91□□□□□ -0.18
GREB1-208ENST00000470980 ARHGEF12Q9NZN5 1544 aa13.91□□□□□ -0.18
GREB1-208ENST00000470980 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
GREB1-208ENST00000470980 C9orf84Q5VXU9 1444 aa13.9□□□□□ -0.19
GREB1-208ENST00000470980 TCOF1Q13428 1488 aaKnown RBP13.89□□□□□ -0.19
GREB1-208ENST00000470980 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
GREB1-208ENST00000470980 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
GREB1-208ENST00000470980 ITSN2Q9NZM3 1697 aa13.88□□□□□ -0.19
GREB1-208ENST00000470980 GPATCH8Q9UKJ3 1502 aaKnown RBP13.87□□□□□ -0.19
GREB1-208ENST00000470980 CFDP1Q9UEE9 299 aaPredicted RBP13.87□□□□□ -0.19
GREB1-208ENST00000470980 MLH3Q9UHC1 1453 aa13.87□□□□□ -0.19
GREB1-208ENST00000470980 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
GREB1-208ENST00000470980 CDC42BPBQ9Y5S2 1711 aa13.86□□□□□ -0.19
GREB1-208ENST00000470980 FER1L4A9Z1Z3 1794 aa13.86□□□□□ -0.19
GREB1-208ENST00000470980 ARHGAP5Q13017 1502 aa13.85□□□□□ -0.19
GREB1-208ENST00000470980 PREX2Q70Z35 1606 aa13.84□□□□□ -0.19
GREB1-208ENST00000470980 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
GREB1-208ENST00000470980 AFAP1Q8N556 730 aa13.83□□□□□ -0.2
GREB1-208ENST00000470980 ZNF777Q9ULD5 760 aaPredicted RBP13.83□□□□□ -0.2
GREB1-208ENST00000470980 ABCC1P33527 1531 aa13.83□□□□□ -0.2
GREB1-208ENST00000470980 AGLP35573 1532 aa13.83□□□□□ -0.2
GREB1-208ENST00000470980 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
GREB1-208ENST00000470980 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
GREB1-208ENST00000470980 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
GREB1-208ENST00000470980 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
GREB1-208ENST00000470980 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
GREB1-208ENST00000470980 RAB3GAP2Q9H2M9 1393 aa13.81□□□□□ -0.2
GREB1-208ENST00000470980 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
GREB1-208ENST00000470980 ABCA6Q8N139 1617 aa13.79□□□□□ -0.2
GREB1-208ENST00000470980 PREX1Q8TCU6 1659 aa13.79□□□□□ -0.2
GREB1-208ENST00000470980 HSPA2P54652 639 aa13.79□□□□□ -0.2
GREB1-208ENST00000470980 MLECQ14165 292 aa13.78□□□□□ -0.2
GREB1-208ENST00000470980 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
GREB1-208ENST00000470980 DAPK1P53355 1430 aa13.78□□□□□ -0.2
GREB1-208ENST00000470980 DNMT1P26358 1616 aaKnown RBP13.77□□□□□ -0.21
GREB1-208ENST00000470980 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
GREB1-208ENST00000470980 HFM1A2PYH4 1435 aa13.76□□□□□ -0.21
GREB1-208ENST00000470980 ABCC5O15440 1437 aa13.76□□□□□ -0.21
GREB1-208ENST00000470980 SETD1BQ9UPS6 1966 aaKnown RBP13.75□□□□□ -0.21
GREB1-208ENST00000470980 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
GREB1-208ENST00000470980 SAMD9LQ8IVG5 1584 aa13.74□□□□□ -0.21
GREB1-208ENST00000470980 NAIPQ13075 1403 aa13.73□□□□□ -0.21
GREB1-208ENST00000470980 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
GREB1-208ENST00000470980 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
GREB1-208ENST00000470980 CEBPAP49715 358 aaPredicted RBP13.73□□□□□ -0.21
GREB1-208ENST00000470980 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
GREB1-208ENST00000470980 STRCQ7RTU9 1775 aa13.72□□□□□ -0.21
GREB1-208ENST00000470980 C3P01024 1663 aa13.72□□□□□ -0.21
GREB1-208ENST00000470980 CNTLNQ9NXG0 1405 aa13.72□□□□□ -0.21
GREB1-208ENST00000470980 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
GREB1-208ENST00000470980 HNRNPMP52272 730 aaKnown RBP eCLIP13.71□□□□□ -0.21
GREB1-208ENST00000470980 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.22
GREB1-208ENST00000470980 PLEKHH2Q8IVE3 1493 aa13.7□□□□□ -0.22
GREB1-208ENST00000470980 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
GREB1-208ENST00000470980 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
GREB1-208ENST00000470980 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms