RNA–Protein interactions for RNA: ENST00000470838.1

CPA1-202, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-202ENST00000470838 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
CPA1-202ENST00000470838 HECW1Q76N89 1606 aa30.24■■■□□ 2.43
CPA1-202ENST00000470838 ATP1B4Q9UN42 357 aaPredicted RBP30.23■■■□□ 2.43
CPA1-202ENST00000470838 SIGLEC1Q9BZZ2 1709 aa30.21■■■□□ 2.43
CPA1-202ENST00000470838 RIMS1Q86UR5 1692 aaKnown RBP30.18■■■□□ 2.42
CPA1-202ENST00000470838 FBXO41Q8TF61 875 aa30.18■■■□□ 2.42
CPA1-202ENST00000470838 TROQ12816 1431 aaPredicted RBP30.18■■■□□ 2.42
CPA1-202ENST00000470838 ATP10AO60312 1499 aa30.16■■■□□ 2.42
CPA1-202ENST00000470838 KIF14Q15058 1648 aa30.12■■■□□ 2.41
CPA1-202ENST00000470838 MYO5CQ9NQX4 1742 aa30.11■■■□□ 2.41
CPA1-202ENST00000470838 MLECQ14165 292 aa30.09■■■□□ 2.41
CPA1-202ENST00000470838 C9orf84Q5VXU9 1444 aa30.08■■■□□ 2.41
CPA1-202ENST00000470838 AFAP1Q8N556 730 aa30.08■■■□□ 2.41
CPA1-202ENST00000470838 ARHGEF12Q9NZN5 1544 aa30.07■■■□□ 2.4
CPA1-202ENST00000470838 ZNF518AQ6AHZ1 1483 aa30.07■■■□□ 2.4
CPA1-202ENST00000470838 CLIP1P30622 1438 aa30.07■■■□□ 2.4
CPA1-202ENST00000470838 HSPA2P54652 639 aa30.07■■■□□ 2.4
CPA1-202ENST00000470838 KDM5CP41229 1560 aa30.04■■■□□ 2.4
CPA1-202ENST00000470838 LRRIQ1Q96JM4 1722 aa30.04■■■□□ 2.4
CPA1-202ENST00000470838 CASKIN1Q8WXD9 1431 aa30.04■■■□□ 2.4
CPA1-202ENST00000470838 ARHGAP5Q13017 1502 aa30.02■■■□□ 2.4
CPA1-202ENST00000470838 PLPPR3Q6T4P5 718 aa29.99■■■□□ 2.39
CPA1-202ENST00000470838 FER1L4A9Z1Z3 1794 aa29.99■■■□□ 2.39
CPA1-202ENST00000470838 MLH3Q9UHC1 1453 aa29.97■■■□□ 2.39
CPA1-202ENST00000470838 CCDC18Q5T9S5 1454 aa29.96■■■□□ 2.39
CPA1-202ENST00000470838 CDC42BPBQ9Y5S2 1711 aa29.95■■■□□ 2.38
CPA1-202ENST00000470838 REREQ9P2R6 1566 aa29.94■■■□□ 2.38
CPA1-202ENST00000470838 CEBPAP49715 358 aaPredicted RBP29.92■■■□□ 2.38
CPA1-202ENST00000470838 TRAPPC8Q9Y2L5 1435 aa29.91■■■□□ 2.38
CPA1-202ENST00000470838 DIP2CQ9Y2E4 1556 aa29.9■■■□□ 2.38
CPA1-202ENST00000470838 PREX2Q70Z35 1606 aa29.88■■■□□ 2.37
CPA1-202ENST00000470838 ABCC1P33527 1531 aa29.86■■■□□ 2.37
CPA1-202ENST00000470838 AGLP35573 1532 aa29.86■■■□□ 2.37
CPA1-202ENST00000470838 FYCO1Q9BQS8 1478 aa29.85■■■□□ 2.37
CPA1-202ENST00000470838 MYT1LQ9UL68 1186 aa29.84■■■□□ 2.37
CPA1-202ENST00000470838 SETD1BQ9UPS6 1966 aaKnown RBP29.83■■■□□ 2.37
CPA1-202ENST00000470838 ABCA6Q8N139 1617 aa29.82■■■□□ 2.36
CPA1-202ENST00000470838 CERKQ8TCT0 537 aa29.81■■■□□ 2.36
CPA1-202ENST00000470838 PREX1Q8TCU6 1659 aa29.81■■■□□ 2.36
CPA1-202ENST00000470838 CDC42BPAQ5VT25 1732 aa29.78■■■□□ 2.36
CPA1-202ENST00000470838 ITSN2Q9NZM3 1697 aa29.78■■■□□ 2.36
CPA1-202ENST00000470838 GPATCH8Q9UKJ3 1502 aaKnown RBP29.77■■■□□ 2.36
CPA1-202ENST00000470838 KIDINS220Q9ULH0 1771 aa29.76■■■□□ 2.35
CPA1-202ENST00000470838 UHRF1BP1Q6BDS2 1440 aa29.74■■■□□ 2.35
CPA1-202ENST00000470838 DMRT2Q9Y5R5 561 aa29.74■■■□□ 2.35
CPA1-202ENST00000470838 SAMD9LQ8IVG5 1584 aa29.71■■■□□ 2.35
CPA1-202ENST00000470838 KIAA1107Q9UPP5 1409 aa29.71■■■□□ 2.35
CPA1-202ENST00000470838 STRCQ7RTU9 1775 aa29.69■■■□□ 2.34
CPA1-202ENST00000470838 ZNF777Q9ULD5 760 aaPredicted RBP29.69■■■□□ 2.34
CPA1-202ENST00000470838 HNRNPMP52272 730 aaKnown RBP eCLIP29.68■■■□□ 2.34
CPA1-202ENST00000470838 ESF1Q9H501 851 aaKnown RBP29.68■■■□□ 2.34
CPA1-202ENST00000470838 C3P01024 1663 aa29.68■■■□□ 2.34
CPA1-202ENST00000470838 CNTLNQ9NXG0 1405 aa29.68■■■□□ 2.34
CPA1-202ENST00000470838 SPAG9O60271 1321 aaKnown RBP29.67■■■□□ 2.34
CPA1-202ENST00000470838 CFDP1Q9UEE9 299 aaPredicted RBP29.64■■■□□ 2.34
CPA1-202ENST00000470838 SYCP2Q9BX26 1530 aa29.63■■■□□ 2.33
CPA1-202ENST00000470838 PTPRTO14522 1441 aa29.62■■■□□ 2.33
CPA1-202ENST00000470838 PLEKHH2Q8IVE3 1493 aa29.61■■■□□ 2.33
CPA1-202ENST00000470838 CCNB3Q8WWL7 1395 aa29.6■■■□□ 2.33
CPA1-202ENST00000470838 ZMYM3Q14202 1370 aa29.58■■■□□ 2.33
CPA1-202ENST00000470838 NPATQ14207 1427 aa29.57■■■□□ 2.32
CPA1-202ENST00000470838 MTUS2Q5JR59 1369 aa29.56■■■□□ 2.32
CPA1-202ENST00000470838 ATP7AQ04656 1500 aa29.55■■■□□ 2.32
CPA1-202ENST00000470838 PLXNC1O60486 1568 aa29.52■■■□□ 2.32
CPA1-202ENST00000470838 A2MP01023 1474 aa29.52■■■□□ 2.32
CPA1-202ENST00000470838 MROH2AA6NES4 1674 aa29.52■■■□□ 2.32
CPA1-202ENST00000470838 INO80Q9ULG1 1556 aaPredicted RBP29.52■■■□□ 2.32
CPA1-202ENST00000470838 NCOA1Q15788 1441 aa29.51■■■□□ 2.31
CPA1-202ENST00000470838 PPP6R1Q9UPN7 881 aa29.5■■■□□ 2.31
CPA1-202ENST00000470838 MBD5Q9P267 1494 aa29.49■■■□□ 2.31
CPA1-202ENST00000470838 ZNF644Q9H582 1327 aaPredicted RBP29.49■■■□□ 2.31
CPA1-202ENST00000470838 CEP162Q5TB80 1403 aa29.45■■■□□ 2.31
CPA1-202ENST00000470838 SUPT6HQ7KZ85 1726 aaKnown RBP29.45■■■□□ 2.31
CPA1-202ENST00000470838 TIAM1Q13009 1591 aa29.44■■■□□ 2.3
CPA1-202ENST00000470838 RTEL1-TNFRSF6BF6WH68 1400 aa29.44■■■□□ 2.3
CPA1-202ENST00000470838 LTBP4Q8N2S1 1624 aa29.43■■■□□ 2.3
CPA1-202ENST00000470838 EHBP1L1Q8N3D4 1523 aa29.42■■■□□ 2.3
CPA1-202ENST00000470838 GGT6Q6P531 493 aa29.42■■■□□ 2.3
CPA1-202ENST00000470838 PTPRKQ15262 1439 aa29.42■■■□□ 2.3
CPA1-202ENST00000470838 CAMSAP1Q5T5Y3 1602 aa29.38■■■□□ 2.29
CPA1-202ENST00000470838 DHX29Q7Z478 1369 aaKnown RBP29.38■■■□□ 2.29
CPA1-202ENST00000470838 CLTCQ00610 1675 aaKnown RBP29.37■■■□□ 2.29
CPA1-202ENST00000470838 ADGBQ8N7X0 1667 aa29.36■■■□□ 2.29
CPA1-202ENST00000470838 IQSEC2Q5JU85 1478 aa29.35■■■□□ 2.29
CPA1-202ENST00000470838 RSPH4AQ5TD94 716 aa29.34■■■□□ 2.29
CPA1-202ENST00000470838 PKD2Q13563 968 aa29.33■■■□□ 2.29
CPA1-202ENST00000470838 NCKAP5LQ9HCH0 1330 aa29.33■■■□□ 2.29
CPA1-202ENST00000470838 PLA2R1Q13018 1463 aa29.33■■■□□ 2.29
CPA1-202ENST00000470838 TCOF1Q13428 1488 aaKnown RBP29.29■■■□□ 2.28
CPA1-202ENST00000470838 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
CPA1-202ENST00000470838 ZNF142P52746 1687 aaPredicted RBP29.29■■■□□ 2.28
CPA1-202ENST00000470838 CEP170BQ9Y4F5 1589 aaPredicted RBP29.27■■■□□ 2.28
CPA1-202ENST00000470838 MYO3AQ8NEV4 1616 aa29.27■■■□□ 2.28
CPA1-202ENST00000470838 CCDC141Q6ZP82 1450 aa29.26■■■□□ 2.27
CPA1-202ENST00000470838 KIF3BO15066 747 aa29.23■■■□□ 2.27
CPA1-202ENST00000470838 ZNF335Q9H4Z2 1342 aaPredicted RBP29.22■■■□□ 2.27
CPA1-202ENST00000470838 A2ML1A8K2U0 1454 aa29.22■■■□□ 2.27
CPA1-202ENST00000470838 CAMSAP2Q08AD1 1489 aa29.22■■■□□ 2.27
CPA1-202ENST00000470838 FAM135AQ9P2D6 1515 aa29.2■■■□□ 2.26
CPA1-202ENST00000470838 FBXO31Q5XUX0 539 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms