RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 FAM69CQ0P6D2 419 aa14.63□□□□□ -0.07
CCM2-204ENST00000470837 CD109Q6YHK3 1445 aa14.63□□□□□ -0.07
CCM2-204ENST00000470837 RSPH4AQ5TD94 716 aa14.62□□□□□ -0.07
CCM2-204ENST00000470837 CAMSAP2Q08AD1 1489 aa14.62□□□□□ -0.07
CCM2-204ENST00000470837 PLEKHH2Q8IVE3 1493 aa14.62□□□□□ -0.07
CCM2-204ENST00000470837 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
CCM2-204ENST00000470837 PREX2Q70Z35 1606 aa14.6□□□□□ -0.07
CCM2-204ENST00000470837 ABCA9Q8IUA7 1624 aa14.6□□□□□ -0.07
CCM2-204ENST00000470837 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
CCM2-204ENST00000470837 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
CCM2-204ENST00000470837 MYO5CQ9NQX4 1742 aa14.59□□□□□ -0.07
CCM2-204ENST00000470837 ARAP3Q8WWN8 1544 aa14.59□□□□□ -0.07
CCM2-204ENST00000470837 CDC42BPAQ5VT25 1732 aa14.58□□□□□ -0.07
CCM2-204ENST00000470837 FANCAO15360 1455 aa14.57□□□□□ -0.08
CCM2-204ENST00000470837 HNRNPMP52272 730 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCM2-204ENST00000470837 KIAA1107Q9UPP5 1409 aa14.57□□□□□ -0.08
CCM2-204ENST00000470837 CHIC2Q9UKJ5 165 aa14.56□□□□□ -0.08
CCM2-204ENST00000470837 DAPK1P53355 1430 aa14.56□□□□□ -0.08
CCM2-204ENST00000470837 GLI2P10070 1586 aa14.56□□□□□ -0.08
CCM2-204ENST00000470837 ABCC5O15440 1437 aa14.53□□□□□ -0.08
CCM2-204ENST00000470837 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.08
CCM2-204ENST00000470837 DIP2BQ9P265 1576 aa14.52□□□□□ -0.08
CCM2-204ENST00000470837 CCDC141Q6ZP82 1450 aa14.52□□□□□ -0.08
CCM2-204ENST00000470837 AKNAQ7Z591 1439 aa14.52□□□□□ -0.08
CCM2-204ENST00000470837 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
CCM2-204ENST00000470837 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.09
CCM2-204ENST00000470837 SAMD9LQ8IVG5 1584 aa14.51□□□□□ -0.09
CCM2-204ENST00000470837 CFAP74Q9C0B2 1584 aa14.51□□□□□ -0.09
CCM2-204ENST00000470837 ADGRL1O94910 1474 aa14.51□□□□□ -0.09
CCM2-204ENST00000470837 ANKRD30AQ9BXX3 1397 aa14.51□□□□□ -0.09
CCM2-204ENST00000470837 DNMT1P26358 1616 aaKnown RBP14.51□□□□□ -0.09
CCM2-204ENST00000470837 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
CCM2-204ENST00000470837 TEX14Q8IWB6 1497 aa14.5□□□□□ -0.09
CCM2-204ENST00000470837 NEO1Q92859 1461 aa14.5□□□□□ -0.09
CCM2-204ENST00000470837 SETD5Q9C0A6 1442 aa14.5□□□□□ -0.09
CCM2-204ENST00000470837 ROCK1Q13464 1354 aa14.5□□□□□ -0.09
CCM2-204ENST00000470837 RRP7BPQ9NSQ0 103 aa14.5□□□□□ -0.09
CCM2-204ENST00000470837 C9orf84Q5VXU9 1444 aa14.49□□□□□ -0.09
CCM2-204ENST00000470837 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
CCM2-204ENST00000470837 ARHGEF5Q12774 1597 aa14.49□□□□□ -0.09
CCM2-204ENST00000470837 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
CCM2-204ENST00000470837 SHANK2Q9UPX8 1470 aa14.49□□□□□ -0.09
CCM2-204ENST00000470837 PTPRKQ15262 1439 aa14.49□□□□□ -0.09
CCM2-204ENST00000470837 ACIN1Q9UKV3 1341 aaKnown RBP14.48□□□□□ -0.09
CCM2-204ENST00000470837 ABCC1P33527 1531 aa14.48□□□□□ -0.09
CCM2-204ENST00000470837 HFM1A2PYH4 1435 aa14.48□□□□□ -0.09
CCM2-204ENST00000470837 SPAG9O60271 1321 aaKnown RBP14.47□□□□□ -0.09
CCM2-204ENST00000470837 MAP3K4Q9Y6R4 1608 aa14.47□□□□□ -0.09
CCM2-204ENST00000470837 HRCP23327 699 aa14.46□□□□□ -0.09
CCM2-204ENST00000470837 RAB3GAP2Q9H2M9 1393 aa14.46□□□□□ -0.1
CCM2-204ENST00000470837 AFAP1Q8N556 730 aa14.45□□□□□ -0.1
CCM2-204ENST00000470837 CCER1Q8TC90 406 aaPredicted RBP14.45□□□□□ -0.1
CCM2-204ENST00000470837 TRAPPC8Q9Y2L5 1435 aa14.44□□□□□ -0.1
CCM2-204ENST00000470837 ARHGEF12Q9NZN5 1544 aa14.44□□□□□ -0.1
CCM2-204ENST00000470837 DENND4BO75064 1496 aaPredicted RBP14.44□□□□□ -0.1
CCM2-204ENST00000470837 ZNF518AQ6AHZ1 1483 aa14.44□□□□□ -0.1
CCM2-204ENST00000470837 NAIPQ13075 1403 aa14.43□□□□□ -0.1
CCM2-204ENST00000470837 NCOA1Q15788 1441 aa14.43□□□□□ -0.1
CCM2-204ENST00000470837 ADGRL2O95490 1459 aa14.43□□□□□ -0.1
CCM2-204ENST00000470837 KIF15Q9NS87 1388 aa14.42□□□□□ -0.1
CCM2-204ENST00000470837 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
CCM2-204ENST00000470837 POGZQ7Z3K3 1410 aa14.41□□□□□ -0.1
CCM2-204ENST00000470837 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
CCM2-204ENST00000470837 TRIM52Q96A61 297 aa14.4□□□□□ -0.1
CCM2-204ENST00000470837 ANKRD50Q9ULJ7 1429 aa14.39□□□□□ -0.11
CCM2-204ENST00000470837 MAST1Q9Y2H9 1570 aa14.39□□□□□ -0.11
CCM2-204ENST00000470837 RAPGEF3O95398 923 aa14.38□□□□□ -0.11
CCM2-204ENST00000470837 ADGBQ8N7X0 1667 aa14.38□□□□□ -0.11
CCM2-204ENST00000470837 TSPOAP1O95153 1857 aa14.35□□□□□ -0.11
CCM2-204ENST00000470837 KIF13AQ9H1H9 1805 aa14.35□□□□□ -0.11
CCM2-204ENST00000470837 ATP7AQ04656 1500 aa14.35□□□□□ -0.11
CCM2-204ENST00000470837 GCC2Q8IWJ2 1684 aa14.34□□□□□ -0.11
CCM2-204ENST00000470837 DUOX2Q9NRD8 1548 aa14.34□□□□□ -0.11
CCM2-204ENST00000470837 MLH3Q9UHC1 1453 aa14.33□□□□□ -0.12
CCM2-204ENST00000470837 ZFYVE16Q7Z3T8 1539 aa14.33□□□□□ -0.12
CCM2-204ENST00000470837 PLXNC1O60486 1568 aa14.33□□□□□ -0.12
CCM2-204ENST00000470837 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
CCM2-204ENST00000470837 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
CCM2-204ENST00000470837 KDM5CP41229 1560 aa14.31□□□□□ -0.12
CCM2-204ENST00000470837 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
CCM2-204ENST00000470837 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
CCM2-204ENST00000470837 CLSPNQ9HAW4 1339 aa14.3□□□□□ -0.12
CCM2-204ENST00000470837 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
CCM2-204ENST00000470837 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
CCM2-204ENST00000470837 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
CCM2-204ENST00000470837 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
CCM2-204ENST00000470837 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
CCM2-204ENST00000470837 NUP155O75694 1391 aa14.28□□□□□ -0.12
CCM2-204ENST00000470837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCM2-204ENST00000470837 A2MP01023 1474 aa14.27□□□□□ -0.12
CCM2-204ENST00000470837 KANK1Q14678 1352 aa14.27□□□□□ -0.12
CCM2-204ENST00000470837 KIF3BO15066 747 aa14.27□□□□□ -0.13
CCM2-204ENST00000470837 MPHOSPH9Q99550 1183 aa14.26□□□□□ -0.13
CCM2-204ENST00000470837 ZMYM4Q5VZL5 1548 aa14.25□□□□□ -0.13
CCM2-204ENST00000470837 RICTORQ6R327 1708 aa14.24□□□□□ -0.13
CCM2-204ENST00000470837 KDM6BO15054 1643 aa14.24□□□□□ -0.13
CCM2-204ENST00000470837 KIDINS220Q9ULH0 1771 aa14.24□□□□□ -0.13
CCM2-204ENST00000470837 FRMPD1Q5SYB0 1578 aa14.22□□□□□ -0.13
CCM2-204ENST00000470837 ATP10AO60312 1499 aa14.22□□□□□ -0.13
CCM2-204ENST00000470837 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms