RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
LMCD1-207ENST00000470776 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
LMCD1-207ENST00000470776 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
LMCD1-207ENST00000470776 TTC37Q6PGP7 1564 aa13.39□□□□□ -0.27
LMCD1-207ENST00000470776 PREX2Q70Z35 1606 aa13.38□□□□□ -0.27
LMCD1-207ENST00000470776 ABCA9Q8IUA7 1624 aa13.38□□□□□ -0.27
LMCD1-207ENST00000470776 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
LMCD1-207ENST00000470776 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
LMCD1-207ENST00000470776 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
LMCD1-207ENST00000470776 ABCC5O15440 1437 aa13.37□□□□□ -0.27
LMCD1-207ENST00000470776 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
LMCD1-207ENST00000470776 ITGAEP38570 1179 aa13.36□□□□□ -0.27
LMCD1-207ENST00000470776 DAPK1P53355 1430 aa13.36□□□□□ -0.27
LMCD1-207ENST00000470776 AKNAQ7Z591 1439 aa13.36□□□□□ -0.27
LMCD1-207ENST00000470776 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
LMCD1-207ENST00000470776 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
LMCD1-207ENST00000470776 PLEKHH2Q8IVE3 1493 aa13.35□□□□□ -0.27
LMCD1-207ENST00000470776 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
LMCD1-207ENST00000470776 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
LMCD1-207ENST00000470776 GLI2P10070 1586 aa13.33□□□□□ -0.28
LMCD1-207ENST00000470776 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
LMCD1-207ENST00000470776 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
LMCD1-207ENST00000470776 ZNF777Q9ULD5 760 aaPredicted RBP13.33□□□□□ -0.28
LMCD1-207ENST00000470776 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
LMCD1-207ENST00000470776 MYO5CQ9NQX4 1742 aa13.33□□□□□ -0.28
LMCD1-207ENST00000470776 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
LMCD1-207ENST00000470776 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
LMCD1-207ENST00000470776 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
LMCD1-207ENST00000470776 NAIPQ13075 1403 aa13.3□□□□□ -0.28
LMCD1-207ENST00000470776 CD109Q6YHK3 1445 aa13.3□□□□□ -0.28
LMCD1-207ENST00000470776 ADGRL2O95490 1459 aa13.3□□□□□ -0.28
LMCD1-207ENST00000470776 KIF13AQ9H1H9 1805 aa13.3□□□□□ -0.28
LMCD1-207ENST00000470776 HNRNPMP52272 730 aaKnown RBP eCLIP13.29□□□□□ -0.28
LMCD1-207ENST00000470776 RAB3GAP2Q9H2M9 1393 aa13.29□□□□□ -0.28
LMCD1-207ENST00000470776 ZEB1P37275 1124 aaPredicted RBP13.28□□□□□ -0.28
LMCD1-207ENST00000470776 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
LMCD1-207ENST00000470776 NCOA1Q15788 1441 aa13.28□□□□□ -0.28
LMCD1-207ENST00000470776 FANCAO15360 1455 aa13.28□□□□□ -0.28
LMCD1-207ENST00000470776 CCDC141Q6ZP82 1450 aa13.28□□□□□ -0.28
LMCD1-207ENST00000470776 ARHGEF12Q9NZN5 1544 aa13.28□□□□□ -0.28
LMCD1-207ENST00000470776 TSPY4P0CV99 314 aa13.27□□□□□ -0.29
LMCD1-207ENST00000470776 TSPY10P0CW01 314 aa13.27□□□□□ -0.29
LMCD1-207ENST00000470776 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
LMCD1-207ENST00000470776 ABCC1P33527 1531 aa13.27□□□□□ -0.29
LMCD1-207ENST00000470776 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
LMCD1-207ENST00000470776 DIP2BQ9P265 1576 aa13.25□□□□□ -0.29
LMCD1-207ENST00000470776 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
LMCD1-207ENST00000470776 SYCP2Q9BX26 1530 aa13.25□□□□□ -0.29
LMCD1-207ENST00000470776 NEO1Q92859 1461 aa13.25□□□□□ -0.29
LMCD1-207ENST00000470776 ANKRD30AQ9BXX3 1397 aa13.25□□□□□ -0.29
LMCD1-207ENST00000470776 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
LMCD1-207ENST00000470776 RRP7BPQ9NSQ0 103 aa13.24□□□□□ -0.29
LMCD1-207ENST00000470776 CROCC2H7BZ55 1655 aa13.24□□□□□ -0.29
LMCD1-207ENST00000470776 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
LMCD1-207ENST00000470776 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
LMCD1-207ENST00000470776 RTEL1-TNFRSF6BF6WH68 1400 aa13.22□□□□□ -0.29
LMCD1-207ENST00000470776 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
LMCD1-207ENST00000470776 SCAPERQ9BY12 1400 aa13.22□□□□□ -0.29
LMCD1-207ENST00000470776 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.29
LMCD1-207ENST00000470776 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
LMCD1-207ENST00000470776 ADGRL1O94910 1474 aa13.21□□□□□ -0.3
LMCD1-207ENST00000470776 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
LMCD1-207ENST00000470776 GCC2Q8IWJ2 1684 aa13.2□□□□□ -0.3
LMCD1-207ENST00000470776 ADGBQ8N7X0 1667 aa13.18□□□□□ -0.3
LMCD1-207ENST00000470776 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
LMCD1-207ENST00000470776 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
LMCD1-207ENST00000470776 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
LMCD1-207ENST00000470776 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
LMCD1-207ENST00000470776 SPAG9O60271 1321 aaKnown RBP13.16□□□□□ -0.3
LMCD1-207ENST00000470776 PLXNC1O60486 1568 aa13.16□□□□□ -0.3
LMCD1-207ENST00000470776 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
LMCD1-207ENST00000470776 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
LMCD1-207ENST00000470776 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
LMCD1-207ENST00000470776 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
LMCD1-207ENST00000470776 KDM6BO15054 1643 aa13.14□□□□□ -0.31
LMCD1-207ENST00000470776 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
LMCD1-207ENST00000470776 KDM5CP41229 1560 aa13.14□□□□□ -0.31
LMCD1-207ENST00000470776 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
LMCD1-207ENST00000470776 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
LMCD1-207ENST00000470776 PPRC1Q5VV67 1664 aaKnown RBP13.12□□□□□ -0.31
LMCD1-207ENST00000470776 INO80Q9ULG1 1556 aaPredicted RBP13.12□□□□□ -0.31
LMCD1-207ENST00000470776 ATP7AQ04656 1500 aa13.11□□□□□ -0.31
LMCD1-207ENST00000470776 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
LMCD1-207ENST00000470776 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
LMCD1-207ENST00000470776 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
LMCD1-207ENST00000470776 MPHOSPH9Q99550 1183 aa13.09□□□□□ -0.31
LMCD1-207ENST00000470776 KDM5DQ9BY66 1539 aa13.08□□□□□ -0.31
LMCD1-207ENST00000470776 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
LMCD1-207ENST00000470776 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
LMCD1-207ENST00000470776 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
LMCD1-207ENST00000470776 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
LMCD1-207ENST00000470776 PZPP20742 1482 aa13.06□□□□□ -0.32
LMCD1-207ENST00000470776 MAGI2Q86UL8 1455 aa13.06□□□□□ -0.32
LMCD1-207ENST00000470776 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
LMCD1-207ENST00000470776 COL17A1Q9UMD9 1497 aaPredicted RBP13.05□□□□□ -0.32
LMCD1-207ENST00000470776 FRMPD1Q5SYB0 1578 aa13.05□□□□□ -0.32
LMCD1-207ENST00000470776 HECW2Q9P2P5 1572 aa13.05□□□□□ -0.32
LMCD1-207ENST00000470776 NUP155O75694 1391 aa13.04□□□□□ -0.32
LMCD1-207ENST00000470776 A2MP01023 1474 aa13.04□□□□□ -0.32
LMCD1-207ENST00000470776 UNC13BO14795 1591 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms