RNA–Protein interactions for RNA: ENST00000470742.5

ITSN1-224, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 474 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-224ENST00000470742 CDC42BPAQ5VT25 1732 aa32.29■■■□□ 2.76
ITSN1-224ENST00000470742 PREX2Q70Z35 1606 aa32.29■■■□□ 2.76
ITSN1-224ENST00000470742 MTUS2Q5JR59 1369 aa32.28■■■□□ 2.76
ITSN1-224ENST00000470742 SCAPERQ9BY12 1400 aa32.25■■■□□ 2.75
ITSN1-224ENST00000470742 KDM4FA0A1W2PPD8 638 aa32.22■■■□□ 2.75
ITSN1-224ENST00000470742 EHBP1L1Q8N3D4 1523 aa32.21■■■□□ 2.75
ITSN1-224ENST00000470742 TIAM1Q13009 1591 aa32.18■■■□□ 2.74
ITSN1-224ENST00000470742 POGZQ7Z3K3 1410 aa32.17■■■□□ 2.74
ITSN1-224ENST00000470742 ZMYM4Q5VZL5 1548 aa32.16■■■□□ 2.74
ITSN1-224ENST00000470742 GPATCH8Q9UKJ3 1502 aaKnown RBP32.15■■■□□ 2.74
ITSN1-224ENST00000470742 ARHGEF40Q8TER5 1519 aa32.12■■■□□ 2.73
ITSN1-224ENST00000470742 CCNB3Q8WWL7 1395 aa32.12■■■□□ 2.73
ITSN1-224ENST00000470742 SUPT6HQ7KZ85 1726 aaKnown RBP32.09■■■□□ 2.73
ITSN1-224ENST00000470742 ITSN2Q9NZM3 1697 aa32.09■■■□□ 2.73
ITSN1-224ENST00000470742 ABCC1P33527 1531 aa32.09■■■□□ 2.73
ITSN1-224ENST00000470742 ZFYVE16Q7Z3T8 1539 aa32.09■■■□□ 2.73
ITSN1-224ENST00000470742 MAGI2Q86UL8 1455 aa32.09■■■□□ 2.73
ITSN1-224ENST00000470742 ZNF777Q9ULD5 760 aaPredicted RBP32.07■■■□□ 2.72
ITSN1-224ENST00000470742 ZNF518AQ6AHZ1 1483 aa32.07■■■□□ 2.72
ITSN1-224ENST00000470742 CFDP1Q9UEE9 299 aaPredicted RBP32.05■■■□□ 2.72
ITSN1-224ENST00000470742 SAMD9LQ8IVG5 1584 aa32.05■■■□□ 2.72
ITSN1-224ENST00000470742 MAP3K1Q13233 1512 aa32.05■■■□□ 2.72
ITSN1-224ENST00000470742 YEATS2Q9ULM3 1422 aa32.04■■■□□ 2.72
ITSN1-224ENST00000470742 AFAP1Q8N556 730 aa32.04■■■□□ 2.72
ITSN1-224ENST00000470742 ARHGEF12Q9NZN5 1544 aa32.04■■■□□ 2.72
ITSN1-224ENST00000470742 KDM5CP41229 1560 aa32.03■■■□□ 2.72
ITSN1-224ENST00000470742 LRRC9Q6ZRR7 1453 aa32.02■■■□□ 2.72
ITSN1-224ENST00000470742 NCOA2Q15596 1464 aa32.01■■■□□ 2.71
ITSN1-224ENST00000470742 TRAPPC8Q9Y2L5 1435 aa32■■■□□ 2.71
ITSN1-224ENST00000470742 ARID4BQ4LE39 1312 aaPredicted RBP31.99■■■□□ 2.71
ITSN1-224ENST00000470742 HECW2Q9P2P5 1572 aa31.98■■■□□ 2.71
ITSN1-224ENST00000470742 MYT1LQ9UL68 1186 aa31.97■■■□□ 2.71
ITSN1-224ENST00000470742 SYCP2Q9BX26 1530 aa31.96■■■□□ 2.71
ITSN1-224ENST00000470742 APLP2Q06481 763 aa31.96■■■□□ 2.71
ITSN1-224ENST00000470742 PLEKHH2Q8IVE3 1493 aa31.95■■■□□ 2.7
ITSN1-224ENST00000470742 BCORL1Q5H9F3 1711 aa31.95■■■□□ 2.7
ITSN1-224ENST00000470742 KANK4Q5T7N3 995 aaPredicted RBP31.94■■■□□ 2.7
ITSN1-224ENST00000470742 SIGLEC1Q9BZZ2 1709 aa31.92■■■□□ 2.7
ITSN1-224ENST00000470742 ATP10AO60312 1499 aa31.92■■■□□ 2.7
ITSN1-224ENST00000470742 ADAMTSL3P82987 1691 aa31.92■■■□□ 2.7
ITSN1-224ENST00000470742 KIAA1107Q9UPP5 1409 aa31.92■■■□□ 2.7
ITSN1-224ENST00000470742 MLH3Q9UHC1 1453 aa31.91■■■□□ 2.7
ITSN1-224ENST00000470742 HNRNPMP52272 730 aaKnown RBP eCLIP31.91■■■□□ 2.7
ITSN1-224ENST00000470742 C9orf84Q5VXU9 1444 aa31.88■■■□□ 2.69
ITSN1-224ENST00000470742 KIDINS220Q9ULH0 1771 aa31.87■■■□□ 2.69
ITSN1-224ENST00000470742 ZNF644Q9H582 1327 aaPredicted RBP31.87■■■□□ 2.69
ITSN1-224ENST00000470742 DIP2CQ9Y2E4 1556 aa31.86■■■□□ 2.69
ITSN1-224ENST00000470742 ABCA6Q8N139 1617 aa31.86■■■□□ 2.69
ITSN1-224ENST00000470742 MADDQ8WXG6 1647 aa31.82■■■□□ 2.68
ITSN1-224ENST00000470742 SPAG9O60271 1321 aaKnown RBP31.8■■■□□ 2.68
ITSN1-224ENST00000470742 CAMSAP2Q08AD1 1489 aa31.79■■■□□ 2.68
ITSN1-224ENST00000470742 REREQ9P2R6 1566 aa31.77■■■□□ 2.68
ITSN1-224ENST00000470742 MBD5Q9P267 1494 aa31.77■■■□□ 2.68
ITSN1-224ENST00000470742 MLECQ14165 292 aa31.76■■■□□ 2.67
ITSN1-224ENST00000470742 ATP7AQ04656 1500 aa31.75■■■□□ 2.67
ITSN1-224ENST00000470742 INO80Q9ULG1 1556 aaPredicted RBP31.75■■■□□ 2.67
ITSN1-224ENST00000470742 RIMS1Q86UR5 1692 aaKnown RBP31.75■■■□□ 2.67
ITSN1-224ENST00000470742 FER1L4A9Z1Z3 1794 aa31.73■■■□□ 2.67
ITSN1-224ENST00000470742 MYOM3Q5VTT5 1437 aa31.73■■■□□ 2.67
ITSN1-224ENST00000470742 PTPRMP28827 1452 aa31.72■■■□□ 2.67
ITSN1-224ENST00000470742 MIA2Q96PC5 1412 aa31.68■■■□□ 2.66
ITSN1-224ENST00000470742 CCDC141Q6ZP82 1450 aa31.68■■■□□ 2.66
ITSN1-224ENST00000470742 AGLP35573 1532 aa31.67■■■□□ 2.66
ITSN1-224ENST00000470742 RSPH4AQ5TD94 716 aa31.67■■■□□ 2.66
ITSN1-224ENST00000470742 ARHGEF5Q12774 1597 aa31.66■■■□□ 2.66
ITSN1-224ENST00000470742 ADGBQ8N7X0 1667 aa31.64■■■□□ 2.66
ITSN1-224ENST00000470742 RTEL1-TNFRSF6BF6WH68 1400 aa31.62■■■□□ 2.65
ITSN1-224ENST00000470742 A2MP01023 1474 aa31.59■■■□□ 2.65
ITSN1-224ENST00000470742 PTPN23Q9H3S7 1636 aa31.57■■■□□ 2.64
ITSN1-224ENST00000470742 PLXNC1O60486 1568 aa31.56■■■□□ 2.64
ITSN1-224ENST00000470742 TSPY4P0CV99 314 aa31.56■■■□□ 2.64
ITSN1-224ENST00000470742 TSPY10P0CW01 314 aa31.56■■■□□ 2.64
ITSN1-224ENST00000470742 PLPPR3Q6T4P5 718 aa31.54■■■□□ 2.64
ITSN1-224ENST00000470742 FGD6Q6ZV73 1430 aa31.52■■■□□ 2.64
ITSN1-224ENST00000470742 MAST1Q9Y2H9 1570 aa31.49■■■□□ 2.63
ITSN1-224ENST00000470742 ESF1Q9H501 851 aaKnown RBP31.48■■■□□ 2.63
ITSN1-224ENST00000470742 TCOF1Q13428 1488 aaKnown RBP31.46■■■□□ 2.63
ITSN1-224ENST00000470742 DHX29Q7Z478 1369 aaKnown RBP31.46■■■□□ 2.63
ITSN1-224ENST00000470742 CROCC2H7BZ55 1655 aa31.44■■■□□ 2.62
ITSN1-224ENST00000470742 C3P01024 1663 aa31.41■■■□□ 2.62
ITSN1-224ENST00000470742 CEBPAP49715 358 aaPredicted RBP31.41■■■□□ 2.62
ITSN1-224ENST00000470742 DNMT1P26358 1616 aaKnown RBP31.41■■■□□ 2.62
ITSN1-224ENST00000470742 SETD1BQ9UPS6 1966 aaKnown RBP31.4■■■□□ 2.62
ITSN1-224ENST00000470742 GGT6Q6P531 493 aa31.4■■■□□ 2.62
ITSN1-224ENST00000470742 ABCC5O15440 1437 aa31.4■■■□□ 2.62
ITSN1-224ENST00000470742 CNTLNQ9NXG0 1405 aa31.4■■■□□ 2.62
ITSN1-224ENST00000470742 DAPK1P53355 1430 aa31.37■■■□□ 2.61
ITSN1-224ENST00000470742 MROH2AA6NES4 1674 aa31.37■■■□□ 2.61
ITSN1-224ENST00000470742 CLTCQ00610 1675 aaKnown RBP31.37■■■□□ 2.61
ITSN1-224ENST00000470742 SHANK2Q9UPX8 1470 aa31.36■■■□□ 2.61
ITSN1-224ENST00000470742 PPARGC1BQ86YN6 1023 aaKnown RBP31.36■■■□□ 2.61
ITSN1-224ENST00000470742 KIF3BO15066 747 aa31.35■■■□□ 2.61
ITSN1-224ENST00000470742 FAM50AQ14320 339 aaKnown RBP31.33■■■□□ 2.61
ITSN1-224ENST00000470742 LMTK3Q96Q04 1460 aa31.32■■■□□ 2.6
ITSN1-224ENST00000470742 PPP6R1Q9UPN7 881 aa31.31■■■□□ 2.6
ITSN1-224ENST00000470742 PREX1Q8TCU6 1659 aa31.3■■■□□ 2.6
ITSN1-224ENST00000470742 ZMYM3Q14202 1370 aa31.28■■■□□ 2.6
ITSN1-224ENST00000470742 DUOX2Q9NRD8 1548 aa31.27■■■□□ 2.6
ITSN1-224ENST00000470742 EIF2AK4Q9P2K8 1649 aaKnown RBP31.27■■■□□ 2.6
ITSN1-224ENST00000470742 KIF15Q9NS87 1388 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms