RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-206ENST00000470600 ABCC1P33527 1531 aa13.88□□□□□ -0.19
TGFBR3-206ENST00000470600 ARHGEF12Q9NZN5 1544 aa13.88□□□□□ -0.19
TGFBR3-206ENST00000470600 CFAP74Q9C0B2 1584 aa13.87□□□□□ -0.19
TGFBR3-206ENST00000470600 FANCAO15360 1455 aa13.86□□□□□ -0.19
TGFBR3-206ENST00000470600 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
TGFBR3-206ENST00000470600 KDM5CP41229 1560 aa13.84□□□□□ -0.19
TGFBR3-206ENST00000470600 ZMYM4Q5VZL5 1548 aa13.84□□□□□ -0.19
TGFBR3-206ENST00000470600 SIGLEC1Q9BZZ2 1709 aa13.84□□□□□ -0.19
TGFBR3-206ENST00000470600 ATP1B4Q9UN42 357 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-206ENST00000470600 MTUS2Q5JR59 1369 aa13.83□□□□□ -0.2
TGFBR3-206ENST00000470600 AKNAQ7Z591 1439 aa13.82□□□□□ -0.2
TGFBR3-206ENST00000470600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-206ENST00000470600 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
TGFBR3-206ENST00000470600 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-206ENST00000470600 PHLDB1Q86UU1 1377 aa13.81□□□□□ -0.2
TGFBR3-206ENST00000470600 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
TGFBR3-206ENST00000470600 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
TGFBR3-206ENST00000470600 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
TGFBR3-206ENST00000470600 SYCP2Q9BX26 1530 aa13.79□□□□□ -0.2
TGFBR3-206ENST00000470600 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
TGFBR3-206ENST00000470600 ADGRL1O94910 1474 aa13.78□□□□□ -0.2
TGFBR3-206ENST00000470600 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
TGFBR3-206ENST00000470600 INO80Q9ULG1 1556 aaPredicted RBP13.76□□□□□ -0.21
TGFBR3-206ENST00000470600 MYOM3Q5VTT5 1437 aa13.76□□□□□ -0.21
TGFBR3-206ENST00000470600 TRAPPC8Q9Y2L5 1435 aa13.76□□□□□ -0.21
TGFBR3-206ENST00000470600 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
TGFBR3-206ENST00000470600 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
TGFBR3-206ENST00000470600 ABCA6Q8N139 1617 aa13.75□□□□□ -0.21
TGFBR3-206ENST00000470600 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
TGFBR3-206ENST00000470600 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
TGFBR3-206ENST00000470600 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
TGFBR3-206ENST00000470600 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
TGFBR3-206ENST00000470600 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
TGFBR3-206ENST00000470600 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
TGFBR3-206ENST00000470600 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
TGFBR3-206ENST00000470600 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
TGFBR3-206ENST00000470600 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
TGFBR3-206ENST00000470600 ZNF644Q9H582 1327 aaPredicted RBP13.72□□□□□ -0.21
TGFBR3-206ENST00000470600 ZFYVE16Q7Z3T8 1539 aa13.72□□□□□ -0.21
TGFBR3-206ENST00000470600 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
TGFBR3-206ENST00000470600 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
TGFBR3-206ENST00000470600 HECW2Q9P2P5 1572 aa13.71□□□□□ -0.21
TGFBR3-206ENST00000470600 RAPGEF3O95398 923 aa13.71□□□□□ -0.21
TGFBR3-206ENST00000470600 FGD6Q6ZV73 1430 aa13.71□□□□□ -0.22
TGFBR3-206ENST00000470600 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
TGFBR3-206ENST00000470600 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
TGFBR3-206ENST00000470600 REREQ9P2R6 1566 aa13.7□□□□□ -0.22
TGFBR3-206ENST00000470600 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
TGFBR3-206ENST00000470600 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
TGFBR3-206ENST00000470600 MAST1Q9Y2H9 1570 aa13.69□□□□□ -0.22
TGFBR3-206ENST00000470600 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-206ENST00000470600 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
TGFBR3-206ENST00000470600 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
TGFBR3-206ENST00000470600 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
TGFBR3-206ENST00000470600 ATP7AQ04656 1500 aa13.65□□□□□ -0.22
TGFBR3-206ENST00000470600 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
TGFBR3-206ENST00000470600 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
TGFBR3-206ENST00000470600 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
TGFBR3-206ENST00000470600 CFDP1Q9UEE9 299 aaPredicted RBP13.64□□□□□ -0.23
TGFBR3-206ENST00000470600 ABCC5O15440 1437 aa13.64□□□□□ -0.23
TGFBR3-206ENST00000470600 BCORL1Q5H9F3 1711 aa13.63□□□□□ -0.23
TGFBR3-206ENST00000470600 PTPRKQ15262 1439 aa13.63□□□□□ -0.23
TGFBR3-206ENST00000470600 SHANK2Q9UPX8 1470 aa13.62□□□□□ -0.23
TGFBR3-206ENST00000470600 ADAMTSL3P82987 1691 aa13.62□□□□□ -0.23
TGFBR3-206ENST00000470600 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.23
TGFBR3-206ENST00000470600 AGLP35573 1532 aa13.6□□□□□ -0.23
TGFBR3-206ENST00000470600 RTEL1-TNFRSF6BF6WH68 1400 aa13.6□□□□□ -0.23
TGFBR3-206ENST00000470600 DAPK1P53355 1430 aa13.59□□□□□ -0.23
TGFBR3-206ENST00000470600 ADGRL2O95490 1459 aa13.59□□□□□ -0.23
TGFBR3-206ENST00000470600 MROH1Q8NDA8 1641 aa13.58□□□□□ -0.24
TGFBR3-206ENST00000470600 ATP10AO60312 1499 aa13.58□□□□□ -0.24
TGFBR3-206ENST00000470600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.24
TGFBR3-206ENST00000470600 C9orf84Q5VXU9 1444 aa13.57□□□□□ -0.24
TGFBR3-206ENST00000470600 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-206ENST00000470600 ZNF777Q9ULD5 760 aaPredicted RBP13.56□□□□□ -0.24
TGFBR3-206ENST00000470600 MSH5O43196 834 aa13.55□□□□□ -0.24
TGFBR3-206ENST00000470600 MADDQ8WXG6 1647 aa13.53□□□□□ -0.24
TGFBR3-206ENST00000470600 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-206ENST00000470600 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
TGFBR3-206ENST00000470600 APLP2Q06481 763 aa13.53□□□□□ -0.24
TGFBR3-206ENST00000470600 A2MP01023 1474 aa13.52□□□□□ -0.25
TGFBR3-206ENST00000470600 DEPDC5O75140 1603 aa13.52□□□□□ -0.25
TGFBR3-206ENST00000470600 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.25
TGFBR3-206ENST00000470600 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
TGFBR3-206ENST00000470600 NCOA1Q15788 1441 aa13.5□□□□□ -0.25
TGFBR3-206ENST00000470600 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
TGFBR3-206ENST00000470600 VWDEQ8N2E2 1590 aa13.48□□□□□ -0.25
TGFBR3-206ENST00000470600 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
TGFBR3-206ENST00000470600 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
TGFBR3-206ENST00000470600 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
TGFBR3-206ENST00000470600 DUOX2Q9NRD8 1548 aa13.47□□□□□ -0.25
TGFBR3-206ENST00000470600 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
TGFBR3-206ENST00000470600 RIMS1Q86UR5 1692 aaKnown RBP13.46□□□□□ -0.26
TGFBR3-206ENST00000470600 KDM5DQ9BY66 1539 aa13.45□□□□□ -0.26
TGFBR3-206ENST00000470600 MROH2AA6NES4 1674 aa13.45□□□□□ -0.26
TGFBR3-206ENST00000470600 ROCK1Q13464 1354 aa13.45□□□□□ -0.26
TGFBR3-206ENST00000470600 UNC13BO14795 1591 aa13.43□□□□□ -0.26
TGFBR3-206ENST00000470600 ERBINQ96RT1 1412 aa13.43□□□□□ -0.26
TGFBR3-206ENST00000470600 C3P01024 1663 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms