RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 KIF14Q15058 1648 aa18.81■□□□□ 0.6
HLA-C-206ENST00000470363 ILDR1Q86SU0 546 aaPredicted RBP18.8■□□□□ 0.6
HLA-C-206ENST00000470363 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
HLA-C-206ENST00000470363 SIGLEC1Q9BZZ2 1709 aa18.79■□□□□ 0.6
HLA-C-206ENST00000470363 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
HLA-C-206ENST00000470363 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
HLA-C-206ENST00000470363 AFAP1Q8N556 730 aa18.75■□□□□ 0.59
HLA-C-206ENST00000470363 CLIP1P30622 1438 aa18.74■□□□□ 0.59
HLA-C-206ENST00000470363 ATP10AO60312 1499 aa18.74■□□□□ 0.59
HLA-C-206ENST00000470363 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
HLA-C-206ENST00000470363 PCF11O94913 1555 aaKnown RBP18.72■□□□□ 0.59
HLA-C-206ENST00000470363 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
HLA-C-206ENST00000470363 LMTK3Q96Q04 1460 aa18.71■□□□□ 0.59
HLA-C-206ENST00000470363 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
HLA-C-206ENST00000470363 ARHGAP5Q13017 1502 aa18.7■□□□□ 0.58
HLA-C-206ENST00000470363 KDM5CP41229 1560 aa18.7■□□□□ 0.58
HLA-C-206ENST00000470363 ARHGEF12Q9NZN5 1544 aa18.69■□□□□ 0.58
HLA-C-206ENST00000470363 C9orf84Q5VXU9 1444 aa18.69■□□□□ 0.58
HLA-C-206ENST00000470363 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
HLA-C-206ENST00000470363 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
HLA-C-206ENST00000470363 RIMS1Q86UR5 1692 aaKnown RBP18.67■□□□□ 0.58
HLA-C-206ENST00000470363 MLECQ14165 292 aa18.67■□□□□ 0.58
HLA-C-206ENST00000470363 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
HLA-C-206ENST00000470363 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
HLA-C-206ENST00000470363 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
HLA-C-206ENST00000470363 ABCC1P33527 1531 aa18.62■□□□□ 0.57
HLA-C-206ENST00000470363 GPATCH8Q9UKJ3 1502 aaKnown RBP18.61■□□□□ 0.57
HLA-C-206ENST00000470363 REREQ9P2R6 1566 aa18.6■□□□□ 0.57
HLA-C-206ENST00000470363 DIP2CQ9Y2E4 1556 aa18.6■□□□□ 0.57
HLA-C-206ENST00000470363 HSPA2P54652 639 aa18.6■□□□□ 0.57
HLA-C-206ENST00000470363 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
HLA-C-206ENST00000470363 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
HLA-C-206ENST00000470363 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
HLA-C-206ENST00000470363 ABCA6Q8N139 1617 aa18.56■□□□□ 0.56
HLA-C-206ENST00000470363 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
HLA-C-206ENST00000470363 AGLP35573 1532 aa18.56■□□□□ 0.56
HLA-C-206ENST00000470363 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
HLA-C-206ENST00000470363 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
HLA-C-206ENST00000470363 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
HLA-C-206ENST00000470363 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.56
HLA-C-206ENST00000470363 SAMD9LQ8IVG5 1584 aa18.54■□□□□ 0.56
HLA-C-206ENST00000470363 KIDINS220Q9ULH0 1771 aa18.53■□□□□ 0.56
HLA-C-206ENST00000470363 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
HLA-C-206ENST00000470363 FBXO41Q8TF61 875 aa18.52■□□□□ 0.56
HLA-C-206ENST00000470363 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.56
HLA-C-206ENST00000470363 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
HLA-C-206ENST00000470363 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
HLA-C-206ENST00000470363 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
HLA-C-206ENST00000470363 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
HLA-C-206ENST00000470363 SYCP2Q9BX26 1530 aa18.49■□□□□ 0.55
HLA-C-206ENST00000470363 SPAG9O60271 1321 aaKnown RBP18.48■□□□□ 0.55
HLA-C-206ENST00000470363 ZNF644Q9H582 1327 aaPredicted RBP18.47■□□□□ 0.55
HLA-C-206ENST00000470363 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.55
HLA-C-206ENST00000470363 MBD5Q9P267 1494 aa18.45■□□□□ 0.54
HLA-C-206ENST00000470363 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
HLA-C-206ENST00000470363 PREX1Q8TCU6 1659 aa18.43■□□□□ 0.54
HLA-C-206ENST00000470363 TIAM1Q13009 1591 aa18.42■□□□□ 0.54
HLA-C-206ENST00000470363 UHRF1BP1Q6BDS2 1440 aa18.41■□□□□ 0.54
HLA-C-206ENST00000470363 CNTLNQ9NXG0 1405 aa18.41■□□□□ 0.54
HLA-C-206ENST00000470363 ATP7AQ04656 1500 aa18.41■□□□□ 0.54
HLA-C-206ENST00000470363 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
HLA-C-206ENST00000470363 INO80Q9ULG1 1556 aaPredicted RBP18.41■□□□□ 0.54
HLA-C-206ENST00000470363 C3P01024 1663 aa18.41■□□□□ 0.54
HLA-C-206ENST00000470363 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
HLA-C-206ENST00000470363 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
HLA-C-206ENST00000470363 A2MP01023 1474 aa18.39■□□□□ 0.53
HLA-C-206ENST00000470363 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
HLA-C-206ENST00000470363 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
HLA-C-206ENST00000470363 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
HLA-C-206ENST00000470363 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
HLA-C-206ENST00000470363 NPATQ14207 1427 aa18.36■□□□□ 0.53
HLA-C-206ENST00000470363 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
HLA-C-206ENST00000470363 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
HLA-C-206ENST00000470363 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
HLA-C-206ENST00000470363 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
HLA-C-206ENST00000470363 DHX29Q7Z478 1369 aaKnown RBP18.32■□□□□ 0.52
HLA-C-206ENST00000470363 PTPRTO14522 1441 aa18.32■□□□□ 0.52
HLA-C-206ENST00000470363 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
HLA-C-206ENST00000470363 MROH2AA6NES4 1674 aa18.31■□□□□ 0.52
HLA-C-206ENST00000470363 RSPH4AQ5TD94 716 aa18.31■□□□□ 0.52
HLA-C-206ENST00000470363 GGT6Q6P531 493 aa18.31■□□□□ 0.52
HLA-C-206ENST00000470363 PTPRKQ15262 1439 aa18.3■□□□□ 0.52
HLA-C-206ENST00000470363 NCOA1Q15788 1441 aa18.29■□□□□ 0.52
HLA-C-206ENST00000470363 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
HLA-C-206ENST00000470363 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
HLA-C-206ENST00000470363 CAMSAP2Q08AD1 1489 aa18.27■□□□□ 0.52
HLA-C-206ENST00000470363 ADGBQ8N7X0 1667 aa18.27■□□□□ 0.52
HLA-C-206ENST00000470363 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
HLA-C-206ENST00000470363 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
HLA-C-206ENST00000470363 CLTCQ00610 1675 aaKnown RBP18.25■□□□□ 0.51
HLA-C-206ENST00000470363 KIF3BO15066 747 aa18.22■□□□□ 0.51
HLA-C-206ENST00000470363 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
HLA-C-206ENST00000470363 CAMSAP1Q5T5Y3 1602 aa18.21■□□□□ 0.51
HLA-C-206ENST00000470363 LTBP4Q8N2S1 1624 aa18.21■□□□□ 0.51
HLA-C-206ENST00000470363 NCKAP5LQ9HCH0 1330 aa18.2■□□□□ 0.5
HLA-C-206ENST00000470363 TSPY4P0CV99 314 aa18.19■□□□□ 0.5
HLA-C-206ENST00000470363 TSPY10P0CW01 314 aa18.19■□□□□ 0.5
HLA-C-206ENST00000470363 FBXO31Q5XUX0 539 aaPredicted RBP18.18■□□□□ 0.5
HLA-C-206ENST00000470363 PLA2R1Q13018 1463 aa18.18■□□□□ 0.5
HLA-C-206ENST00000470363 TCOF1Q13428 1488 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms