RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRAF4-208ENST00000469529 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
TRAF4-208ENST00000469529 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
TRAF4-208ENST00000469529 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.68
TRAF4-208ENST00000469529 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
TRAF4-208ENST00000469529 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
TRAF4-208ENST00000469529 EFCAB2Q5VUJ9 269 aa19.25■□□□□ 0.67
TRAF4-208ENST00000469529 CD109Q6YHK3 1445 aa19.25■□□□□ 0.67
TRAF4-208ENST00000469529 PTPN23Q9H3S7 1636 aa19.23■□□□□ 0.67
TRAF4-208ENST00000469529 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
TRAF4-208ENST00000469529 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
TRAF4-208ENST00000469529 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
TRAF4-208ENST00000469529 HRCP23327 699 aa19.21■□□□□ 0.67
TRAF4-208ENST00000469529 ZNF644Q9H582 1327 aaPredicted RBP19.21■□□□□ 0.67
TRAF4-208ENST00000469529 COL17A1Q9UMD9 1497 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-208ENST00000469529 TTC37Q6PGP7 1564 aa19.19■□□□□ 0.66
TRAF4-208ENST00000469529 PLEKHH2Q8IVE3 1493 aa19.19■□□□□ 0.66
TRAF4-208ENST00000469529 CDC42BPAQ5VT25 1732 aa19.18■□□□□ 0.66
TRAF4-208ENST00000469529 PREX2Q70Z35 1606 aa19.17■□□□□ 0.66
TRAF4-208ENST00000469529 ZNF777Q9ULD5 760 aaPredicted RBP19.16■□□□□ 0.66
TRAF4-208ENST00000469529 ABCC5O15440 1437 aa19.16■□□□□ 0.66
TRAF4-208ENST00000469529 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
TRAF4-208ENST00000469529 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
TRAF4-208ENST00000469529 MBD5Q9P267 1494 aa19.16■□□□□ 0.66
TRAF4-208ENST00000469529 ROCK1Q13464 1354 aa19.14■□□□□ 0.65
TRAF4-208ENST00000469529 DAPK1P53355 1430 aa19.13■□□□□ 0.65
TRAF4-208ENST00000469529 ARHGAP5Q13017 1502 aa19.13■□□□□ 0.65
TRAF4-208ENST00000469529 CDC42BPBQ9Y5S2 1711 aa19.12■□□□□ 0.65
TRAF4-208ENST00000469529 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
TRAF4-208ENST00000469529 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
TRAF4-208ENST00000469529 ITGAEP38570 1179 aa19.11■□□□□ 0.65
TRAF4-208ENST00000469529 MYO5CQ9NQX4 1742 aa19.11■□□□□ 0.65
TRAF4-208ENST00000469529 ARHGEF5Q12774 1597 aa19.1■□□□□ 0.65
TRAF4-208ENST00000469529 TSPY4P0CV99 314 aa19.1■□□□□ 0.65
TRAF4-208ENST00000469529 TSPY10P0CW01 314 aa19.1■□□□□ 0.65
TRAF4-208ENST00000469529 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRAF4-208ENST00000469529 FANCAO15360 1455 aa19.09■□□□□ 0.65
TRAF4-208ENST00000469529 DNMT1P26358 1616 aaKnown RBP19.09■□□□□ 0.65
TRAF4-208ENST00000469529 SETD5Q9C0A6 1442 aa19.08■□□□□ 0.65
TRAF4-208ENST00000469529 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.65
TRAF4-208ENST00000469529 NEO1Q92859 1461 aa19.08■□□□□ 0.64
TRAF4-208ENST00000469529 SHANK2Q9UPX8 1470 aa19.08■□□□□ 0.64
TRAF4-208ENST00000469529 HFM1A2PYH4 1435 aa19.08■□□□□ 0.64
TRAF4-208ENST00000469529 ADGRL2O95490 1459 aa19.05■□□□□ 0.64
TRAF4-208ENST00000469529 CCDC141Q6ZP82 1450 aa19.05■□□□□ 0.64
TRAF4-208ENST00000469529 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
TRAF4-208ENST00000469529 NCOA1Q15788 1441 aa19.05■□□□□ 0.64
TRAF4-208ENST00000469529 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
TRAF4-208ENST00000469529 NAIPQ13075 1403 aa19.03■□□□□ 0.64
TRAF4-208ENST00000469529 ABCC1P33527 1531 aa19.03■□□□□ 0.64
TRAF4-208ENST00000469529 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
TRAF4-208ENST00000469529 ANKRD30AQ9BXX3 1397 aa19.02■□□□□ 0.64
TRAF4-208ENST00000469529 SCAPERQ9BY12 1400 aa19.01■□□□□ 0.63
TRAF4-208ENST00000469529 CHIC2Q9UKJ5 165 aa19.01■□□□□ 0.63
TRAF4-208ENST00000469529 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
TRAF4-208ENST00000469529 ADGRL1O94910 1474 aa18.99■□□□□ 0.63
TRAF4-208ENST00000469529 SYCP2Q9BX26 1530 aa18.99■□□□□ 0.63
TRAF4-208ENST00000469529 TRAPPC8Q9Y2L5 1435 aa18.99■□□□□ 0.63
TRAF4-208ENST00000469529 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
TRAF4-208ENST00000469529 MAST1Q9Y2H9 1570 aa18.98■□□□□ 0.63
TRAF4-208ENST00000469529 RAB3GAP2Q9H2M9 1393 aa18.98■□□□□ 0.63
TRAF4-208ENST00000469529 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
TRAF4-208ENST00000469529 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
TRAF4-208ENST00000469529 RAPGEF3O95398 923 aa18.96■□□□□ 0.63
TRAF4-208ENST00000469529 SPAG9O60271 1321 aaKnown RBP18.95■□□□□ 0.62
TRAF4-208ENST00000469529 ZNF518AQ6AHZ1 1483 aa18.93■□□□□ 0.62
TRAF4-208ENST00000469529 DENND4BO75064 1496 aaPredicted RBP18.92■□□□□ 0.62
TRAF4-208ENST00000469529 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
TRAF4-208ENST00000469529 POGZQ7Z3K3 1410 aa18.91■□□□□ 0.62
TRAF4-208ENST00000469529 CROCC2H7BZ55 1655 aa18.91■□□□□ 0.62
TRAF4-208ENST00000469529 MLH3Q9UHC1 1453 aa18.9■□□□□ 0.62
TRAF4-208ENST00000469529 FRMPD1Q5SYB0 1578 aa18.9■□□□□ 0.62
TRAF4-208ENST00000469529 KIF15Q9NS87 1388 aa18.89■□□□□ 0.61
TRAF4-208ENST00000469529 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
TRAF4-208ENST00000469529 KDM5CP41229 1560 aa18.87■□□□□ 0.61
TRAF4-208ENST00000469529 PLXNC1O60486 1568 aa18.86■□□□□ 0.61
TRAF4-208ENST00000469529 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
TRAF4-208ENST00000469529 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
TRAF4-208ENST00000469529 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
TRAF4-208ENST00000469529 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
TRAF4-208ENST00000469529 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
TRAF4-208ENST00000469529 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
TRAF4-208ENST00000469529 DHX29Q7Z478 1369 aaKnown RBP18.83■□□□□ 0.61
TRAF4-208ENST00000469529 MAGI2Q86UL8 1455 aa18.83■□□□□ 0.6
TRAF4-208ENST00000469529 ZFYVE16Q7Z3T8 1539 aa18.82■□□□□ 0.6
TRAF4-208ENST00000469529 ERBINQ96RT1 1412 aa18.82■□□□□ 0.6
TRAF4-208ENST00000469529 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
TRAF4-208ENST00000469529 INO80Q9ULG1 1556 aaPredicted RBP18.81■□□□□ 0.6
TRAF4-208ENST00000469529 ATP7AQ04656 1500 aa18.8■□□□□ 0.6
TRAF4-208ENST00000469529 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
TRAF4-208ENST00000469529 ZMYM4Q5VZL5 1548 aa18.79■□□□□ 0.6
TRAF4-208ENST00000469529 ARID4BQ4LE39 1312 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-208ENST00000469529 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
TRAF4-208ENST00000469529 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
TRAF4-208ENST00000469529 KIDINS220Q9ULH0 1771 aa18.74■□□□□ 0.59
TRAF4-208ENST00000469529 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
TRAF4-208ENST00000469529 HECW2Q9P2P5 1572 aa18.73■□□□□ 0.59
TRAF4-208ENST00000469529 A2MP01023 1474 aa18.72■□□□□ 0.59
TRAF4-208ENST00000469529 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
TRAF4-208ENST00000469529 KDM5DQ9BY66 1539 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms