RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 TMEM92Q6UXU6 159 aa9.41□□□□□ -0.9
TPR-204ENST00000469463 PKD2Q13563 968 aa9.4□□□□□ -0.9
TPR-204ENST00000469463 MMRN1Q13201 1228 aa9.39□□□□□ -0.91
TPR-204ENST00000469463 ERBB3P21860 1342 aa9.38□□□□□ -0.91
TPR-204ENST00000469463 POTEB3A0JP26 581 aa9.38□□□□□ -0.91
TPR-204ENST00000469463 POTEBQ6S5H4 581 aa9.38□□□□□ -0.91
TPR-204ENST00000469463 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
TPR-204ENST00000469463 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
TPR-204ENST00000469463 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
TPR-204ENST00000469463 RGL2O15211 777 aa9.36□□□□□ -0.91
TPR-204ENST00000469463 GPR153Q6NV75 609 aa9.32□□□□□ -0.92
TPR-204ENST00000469463 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
TPR-204ENST00000469463 KIF3CO14782 793 aa9.29□□□□□ -0.92
TPR-204ENST00000469463 ZNF687Q8N1G0 1237 aa9.27□□□□□ -0.93
TPR-204ENST00000469463 C2orf72A6NCS6 295 aa9.26□□□□□ -0.93
TPR-204ENST00000469463 TMC2Q8TDI7 906 aa9.26□□□□□ -0.93
TPR-204ENST00000469463 ARSIQ5FYB1 569 aa9.25□□□□□ -0.93
TPR-204ENST00000469463 HS6ST3Q8IZP7 471 aa9.24□□□□□ -0.93
TPR-204ENST00000469463 ZNF316A6NFI3 1004 aaPredicted RBP9.23□□□□□ -0.93
TPR-204ENST00000469463 SLC34A2O95436 690 aa9.23□□□□□ -0.93
TPR-204ENST00000469463 PTGER2P43116 358 aa9.21□□□□□ -0.94
TPR-204ENST00000469463 PPP1R37O75864 691 aa9.17□□□□□ -0.94
TPR-204ENST00000469463 KHSRPQ92945 711 aaKnown RBP eCLIP9.17□□□□□ -0.94
TPR-204ENST00000469463 RYDENQ9NUL5 291 aaKnown RBP9.17□□□□□ -0.94
TPR-204ENST00000469463 PCDHGA4Q9Y5G9 962 aa9.17□□□□□ -0.94
TPR-204ENST00000469463 PBX2P40425 430 aa9.16□□□□□ -0.94
TPR-204ENST00000469463 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
TPR-204ENST00000469463 NUDT7P0C024 238 aa9.15□□□□□ -0.94
TPR-204ENST00000469463 DNAJC5Q9H3Z4 198 aa9.15□□□□□ -0.94
TPR-204ENST00000469463 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
TPR-204ENST00000469463 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
TPR-204ENST00000469463 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
TPR-204ENST00000469463 FOXK1P85037 733 aa9.12□□□□□ -0.95
TPR-204ENST00000469463 GPHNQ9NQX3 736 aaPredicted RBP9.12□□□□□ -0.95
TPR-204ENST00000469463 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
TPR-204ENST00000469463 LSM11P83369 360 aaKnown RBP eCLIP9.1□□□□□ -0.95
TPR-204ENST00000469463 PTCD2Q8WV60 388 aaKnown RBP9.1□□□□□ -0.95
TPR-204ENST00000469463 ANKRD13DQ6ZTN6 518 aa9.09□□□□□ -0.95
TPR-204ENST00000469463 PLPP6Q8IY26 295 aa9.08□□□□□ -0.96
TPR-204ENST00000469463 TBC1D12O60347 775 aa9.07□□□□□ -0.96
TPR-204ENST00000469463 DSG2Q14126 1118 aa9.04□□□□□ -0.96
TPR-204ENST00000469463 KDM4FA0A1W2PPD8 638 aa9.03□□□□□ -0.96
TPR-204ENST00000469463 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
TPR-204ENST00000469463 NKX1-1Q15270 411 aaPredicted RBP9.03□□□□□ -0.96
TPR-204ENST00000469463 PPP4R3BQ5MIZ7 849 aa9.01□□□□□ -0.97
TPR-204ENST00000469463 POTEEQ6S8J3 1075 aa9□□□□□ -0.97
TPR-204ENST00000469463 AXIN2Q9Y2T1 843 aa9□□□□□ -0.97
TPR-204ENST00000469463 CRISPLD2Q9H0B8 497 aa8.99□□□□□ -0.97
TPR-204ENST00000469463 TK2O00142 265 aa8.98□□□□□ -0.97
TPR-204ENST00000469463 KCNH8Q96L42 1107 aa8.98□□□□□ -0.97
TPR-204ENST00000469463 PDE4AP27815 886 aa8.97□□□□□ -0.97
TPR-204ENST00000469463 ADGRD1Q6QNK2 874 aa8.97□□□□□ -0.97
TPR-204ENST00000469463 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
TPR-204ENST00000469463 OXER1Q8TDS5 423 aa8.96□□□□□ -0.98
TPR-204ENST00000469463 GTPBP6O43824 516 aaPredicted RBP8.92□□□□□ -0.98
TPR-204ENST00000469463 NCKAP5LQ9HCH0 1330 aa8.91□□□□□ -0.98
TPR-204ENST00000469463 UPF1Q92900 1129 aaKnown RBP eCLIP8.91□□□□□ -0.98
TPR-204ENST00000469463 HCSTQ9UBK5 93 aa8.91□□□□□ -0.98
TPR-204ENST00000469463 PSEN2P49810 448 aa8.9□□□□□ -0.98
TPR-204ENST00000469463 HRO43593 1189 aa8.89□□□□□ -0.99
TPR-204ENST00000469463 DCAF8L2P0C7V8 631 aa8.89□□□□□ -0.99
TPR-204ENST00000469463 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
TPR-204ENST00000469463 DDX27Q96GQ7 796 aaKnown RBP8.89□□□□□ -0.99
TPR-204ENST00000469463 ZNF454Q8N9F8 522 aa8.88□□□□□ -0.99
TPR-204ENST00000469463 STAC3Q96MF2 364 aa8.88□□□□□ -0.99
TPR-204ENST00000469463 KCNK17Q96T54 332 aa8.88□□□□□ -0.99
TPR-204ENST00000469463 BCL2L12Q9HB09 334 aa8.87□□□□□ -0.99
TPR-204ENST00000469463 MFSD10Q14728 455 aa8.86□□□□□ -0.99
TPR-204ENST00000469463 JPH4Q96JJ6 628 aa8.86□□□□□ -0.99
TPR-204ENST00000469463 LARP6Q9BRS8 491 aaKnown RBP8.86□□□□□ -0.99
TPR-204ENST00000469463 SLC4A5Q9BY07 1137 aa8.86□□□□□ -0.99
TPR-204ENST00000469463 ANO8Q9HCE9 1232 aaPredicted RBP8.86□□□□□ -0.99
TPR-204ENST00000469463 FOSBP53539 338 aa8.85□□□□□ -0.99
TPR-204ENST00000469463 EVI5O60447 810 aa8.84□□□□□ -0.99
TPR-204ENST00000469463 PTPREP23469 700 aa8.84□□□□□ -0.99
TPR-204ENST00000469463 MAP3K9P80192 1104 aa8.82□□□□□ -1
TPR-204ENST00000469463 VPS9D1Q9Y2B5 631 aa8.82□□□□□ -1
TPR-204ENST00000469463 ZDHHC16Q969W1 377 aa8.81□□□□□ -1
TPR-204ENST00000469463 PLA2G2EQ9NZK7 142 aa8.81□□□□□ -1
TPR-204ENST00000469463 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
TPR-204ENST00000469463 KCTD12Q96CX2 325 aaKnown RBP8.8□□□□□ -1
TPR-204ENST00000469463 ZBED2Q9BTP6 218 aa8.77□□□□□ -1.01
TPR-204ENST00000469463 RTN4Q9NQC3 1192 aaKnown RBP8.77□□□□□ -1.01
TPR-204ENST00000469463 NBPF3Q9H094 633 aa8.76□□□□□ -1.01
TPR-204ENST00000469463 EMILIN3Q9NT22 766 aa8.76□□□□□ -1.01
TPR-204ENST00000469463 BHMG1C9JSJ3 638 aaPredicted RBP8.75□□□□□ -1.01
TPR-204ENST00000469463 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
TPR-204ENST00000469463 ADAM33Q9BZ11 813 aa8.75□□□□□ -1.01
TPR-204ENST00000469463 GOLGA8CPA6NN73 597 aa8.74□□□□□ -1.01
TPR-204ENST00000469463 MRPL50Q8N5N7 158 aaKnown RBP8.74□□□□□ -1.01
TPR-204ENST00000469463 PPP1R3GB7ZBB8 358 aa8.73□□□□□ -1.01
TPR-204ENST00000469463 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
TPR-204ENST00000469463 PHF14O94880 888 aa8.72□□□□□ -1.01
TPR-204ENST00000469463 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
TPR-204ENST00000469463 CADPS2Q86UW7 1296 aa8.72□□□□□ -1.01
TPR-204ENST00000469463 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
TPR-204ENST00000469463 TYW1BQ6NUM6 668 aa8.71□□□□□ -1.02
TPR-204ENST00000469463 THSD4Q6ZMP0 1018 aa8.7□□□□□ -1.02
TPR-204ENST00000469463 PTPN5P54829 565 aa8.69□□□□□ -1.02
TPR-204ENST00000469463 WNT2BQ93097 391 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms