RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 ARHGEF40Q8TER5 1519 aa29.4■■■□□ 2.3
PHGDH-204ENST00000469443 PREX2Q70Z35 1606 aa29.39■■■□□ 2.3
PHGDH-204ENST00000469443 SCAPERQ9BY12 1400 aa29.37■■■□□ 2.29
PHGDH-204ENST00000469443 CDC42BPAQ5VT25 1732 aa29.37■■■□□ 2.29
PHGDH-204ENST00000469443 POGZQ7Z3K3 1410 aa29.35■■■□□ 2.29
PHGDH-204ENST00000469443 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
PHGDH-204ENST00000469443 ZFYVE16Q7Z3T8 1539 aa29.31■■■□□ 2.28
PHGDH-204ENST00000469443 MAGI2Q86UL8 1455 aa29.31■■■□□ 2.28
PHGDH-204ENST00000469443 BCORL1Q5H9F3 1711 aa29.28■■■□□ 2.28
PHGDH-204ENST00000469443 ADAMTSL3P82987 1691 aa29.28■■■□□ 2.28
PHGDH-204ENST00000469443 YEATS2Q9ULM3 1422 aa29.25■■■□□ 2.27
PHGDH-204ENST00000469443 ZNF518AQ6AHZ1 1483 aa29.24■■■□□ 2.27
PHGDH-204ENST00000469443 ITSN2Q9NZM3 1697 aa29.23■■■□□ 2.27
PHGDH-204ENST00000469443 ABCC1P33527 1531 aa29.23■■■□□ 2.27
PHGDH-204ENST00000469443 MTUS2Q5JR59 1369 aa29.23■■■□□ 2.27
PHGDH-204ENST00000469443 KDM5CP41229 1560 aa29.22■■■□□ 2.27
PHGDH-204ENST00000469443 ARID4BQ4LE39 1312 aaPredicted RBP29.21■■■□□ 2.27
PHGDH-204ENST00000469443 EHBP1L1Q8N3D4 1523 aa29.2■■■□□ 2.27
PHGDH-204ENST00000469443 SIGLEC1Q9BZZ2 1709 aa29.2■■■□□ 2.26
PHGDH-204ENST00000469443 GPATCH8Q9UKJ3 1502 aaKnown RBP29.19■■■□□ 2.26
PHGDH-204ENST00000469443 HECW2Q9P2P5 1572 aa29.17■■■□□ 2.26
PHGDH-204ENST00000469443 MADDQ8WXG6 1647 aa29.16■■■□□ 2.26
PHGDH-204ENST00000469443 ARHGEF12Q9NZN5 1544 aa29.15■■■□□ 2.26
PHGDH-204ENST00000469443 SAMD9LQ8IVG5 1584 aa29.15■■■□□ 2.26
PHGDH-204ENST00000469443 VPS8Q8N3P4 1428 aa29.15■■■□□ 2.26
PHGDH-204ENST00000469443 AFAP1Q8N556 730 aa29.15■■■□□ 2.26
PHGDH-204ENST00000469443 ATP10AO60312 1499 aa29.13■■■□□ 2.25
PHGDH-204ENST00000469443 CCNB3Q8WWL7 1395 aa29.13■■■□□ 2.25
PHGDH-204ENST00000469443 TRAPPC8Q9Y2L5 1435 aa29.11■■■□□ 2.25
PHGDH-204ENST00000469443 TIAM1Q13009 1591 aa29.11■■■□□ 2.25
PHGDH-204ENST00000469443 C9orf84Q5VXU9 1444 aa29.11■■■□□ 2.25
PHGDH-204ENST00000469443 PTPRMP28827 1452 aa29.1■■■□□ 2.25
PHGDH-204ENST00000469443 MLH3Q9UHC1 1453 aa29.09■■■□□ 2.25
PHGDH-204ENST00000469443 RIMS1Q86UR5 1692 aaKnown RBP29.09■■■□□ 2.25
PHGDH-204ENST00000469443 ZNF777Q9ULD5 760 aaPredicted RBP29.08■■■□□ 2.25
PHGDH-204ENST00000469443 DIP2CQ9Y2E4 1556 aa29.08■■■□□ 2.25
PHGDH-204ENST00000469443 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
PHGDH-204ENST00000469443 ABCA6Q8N139 1617 aa29.07■■■□□ 2.24
PHGDH-204ENST00000469443 SYCP2Q9BX26 1530 aa29.07■■■□□ 2.24
PHGDH-204ENST00000469443 CFDP1Q9UEE9 299 aaPredicted RBP29.06■■■□□ 2.24
PHGDH-204ENST00000469443 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
PHGDH-204ENST00000469443 MYT1LQ9UL68 1186 aa29.05■■■□□ 2.24
PHGDH-204ENST00000469443 PLEKHH2Q8IVE3 1493 aa29.04■■■□□ 2.24
PHGDH-204ENST00000469443 FER1L4A9Z1Z3 1794 aa29.04■■■□□ 2.24
PHGDH-204ENST00000469443 REREQ9P2R6 1566 aa29.04■■■□□ 2.24
PHGDH-204ENST00000469443 KIAA1107Q9UPP5 1409 aa29.02■■■□□ 2.24
PHGDH-204ENST00000469443 NCOA2Q15596 1464 aa28.99■■■□□ 2.23
PHGDH-204ENST00000469443 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
PHGDH-204ENST00000469443 HNRNPMP52272 730 aaKnown RBP eCLIP28.97■■■□□ 2.23
PHGDH-204ENST00000469443 MLECQ14165 292 aa28.97■■■□□ 2.23
PHGDH-204ENST00000469443 LRRC9Q6ZRR7 1453 aa28.96■■■□□ 2.23
PHGDH-204ENST00000469443 AGLP35573 1532 aa28.92■■■□□ 2.22
PHGDH-204ENST00000469443 INO80Q9ULG1 1556 aaPredicted RBP28.92■■■□□ 2.22
PHGDH-204ENST00000469443 SPAG9O60271 1321 aaKnown RBP28.92■■■□□ 2.22
PHGDH-204ENST00000469443 ATP7AQ04656 1500 aa28.91■■■□□ 2.22
PHGDH-204ENST00000469443 ZNF644Q9H582 1327 aaPredicted RBP28.9■■■□□ 2.22
PHGDH-204ENST00000469443 MBD5Q9P267 1494 aa28.86■■■□□ 2.21
PHGDH-204ENST00000469443 CAMSAP2Q08AD1 1489 aa28.84■■■□□ 2.21
PHGDH-204ENST00000469443 KANK4Q5T7N3 995 aaPredicted RBP28.82■■■□□ 2.2
PHGDH-204ENST00000469443 ADGBQ8N7X0 1667 aa28.82■■■□□ 2.2
PHGDH-204ENST00000469443 PLPPR3Q6T4P5 718 aa28.79■■■□□ 2.2
PHGDH-204ENST00000469443 PLXNC1O60486 1568 aa28.79■■■□□ 2.2
PHGDH-204ENST00000469443 A2MP01023 1474 aa28.77■■■□□ 2.2
PHGDH-204ENST00000469443 CCDC141Q6ZP82 1450 aa28.77■■■□□ 2.2
PHGDH-204ENST00000469443 APLP2Q06481 763 aa28.76■■■□□ 2.19
PHGDH-204ENST00000469443 LMTK3Q96Q04 1460 aa28.76■■■□□ 2.19
PHGDH-204ENST00000469443 RTEL1-TNFRSF6BF6WH68 1400 aa28.76■■■□□ 2.19
PHGDH-204ENST00000469443 ARHGEF5Q12774 1597 aa28.75■■■□□ 2.19
PHGDH-204ENST00000469443 C3P01024 1663 aa28.74■■■□□ 2.19
PHGDH-204ENST00000469443 RSPH4AQ5TD94 716 aa28.73■■■□□ 2.19
PHGDH-204ENST00000469443 MYOM3Q5VTT5 1437 aa28.72■■■□□ 2.19
PHGDH-204ENST00000469443 SETD1BQ9UPS6 1966 aaKnown RBP28.71■■■□□ 2.19
PHGDH-204ENST00000469443 PREX1Q8TCU6 1659 aa28.7■■■□□ 2.19
PHGDH-204ENST00000469443 MIA2Q96PC5 1412 aa28.69■■■□□ 2.18
PHGDH-204ENST00000469443 ESF1Q9H501 851 aaKnown RBP28.69■■■□□ 2.18
PHGDH-204ENST00000469443 MROH2AA6NES4 1674 aa28.68■■■□□ 2.18
PHGDH-204ENST00000469443 CEBPAP49715 358 aaPredicted RBP28.68■■■□□ 2.18
PHGDH-204ENST00000469443 CNTLNQ9NXG0 1405 aa28.68■■■□□ 2.18
PHGDH-204ENST00000469443 CLTCQ00610 1675 aaKnown RBP28.63■■■□□ 2.17
PHGDH-204ENST00000469443 MAST1Q9Y2H9 1570 aa28.62■■■□□ 2.17
PHGDH-204ENST00000469443 DHX29Q7Z478 1369 aaKnown RBP28.62■■■□□ 2.17
PHGDH-204ENST00000469443 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
PHGDH-204ENST00000469443 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
PHGDH-204ENST00000469443 PTPN23Q9H3S7 1636 aa28.58■■■□□ 2.17
PHGDH-204ENST00000469443 HSPA2P54652 639 aa28.57■■■□□ 2.16
PHGDH-204ENST00000469443 GGT6Q6P531 493 aa28.56■■■□□ 2.16
PHGDH-204ENST00000469443 UHRF1BP1Q6BDS2 1440 aa28.54■■■□□ 2.16
PHGDH-204ENST00000469443 CROCC2H7BZ55 1655 aa28.54■■■□□ 2.16
PHGDH-204ENST00000469443 PPP6R1Q9UPN7 881 aa28.53■■■□□ 2.16
PHGDH-204ENST00000469443 ZMYM3Q14202 1370 aa28.52■■■□□ 2.16
PHGDH-204ENST00000469443 FGD6Q6ZV73 1430 aa28.51■■■□□ 2.15
PHGDH-204ENST00000469443 KIF3BO15066 747 aa28.49■■■□□ 2.15
PHGDH-204ENST00000469443 TCOF1Q13428 1488 aaKnown RBP28.48■■■□□ 2.15
PHGDH-204ENST00000469443 NPATQ14207 1427 aa28.48■■■□□ 2.15
PHGDH-204ENST00000469443 DNMT1P26358 1616 aaKnown RBP28.47■■■□□ 2.15
PHGDH-204ENST00000469443 FAM135AQ9P2D6 1515 aa28.46■■■□□ 2.15
PHGDH-204ENST00000469443 EIF2AK4Q9P2K8 1649 aaKnown RBP28.45■■■□□ 2.14
PHGDH-204ENST00000469443 SHANK2Q9UPX8 1470 aa28.45■■■□□ 2.14
PHGDH-204ENST00000469443 RNF17Q9BXT8 1623 aaKnown RBP28.43■■■□□ 2.14
PHGDH-204ENST00000469443 ABCC5O15440 1437 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms