RNA–Protein interactions for RNA: ENST00000469417.1

PEX1-205, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-205ENST00000469417 HS3ST6Q96QI5 342 aa13.12□□□□□ -0.31
PEX1-205ENST00000469417 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
PEX1-205ENST00000469417 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
PEX1-205ENST00000469417 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
PEX1-205ENST00000469417 SPNS2Q8IVW8 549 aa13.07□□□□□ -0.32
PEX1-205ENST00000469417 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
PEX1-205ENST00000469417 KRTAP3-3Q9BYR6 98 aa13.05□□□□□ -0.32
PEX1-205ENST00000469417 KRTAP3-2Q9BYR7 98 aa13.05□□□□□ -0.32
PEX1-205ENST00000469417 KIF3CO14782 793 aa13.02□□□□□ -0.33
PEX1-205ENST00000469417 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
PEX1-205ENST00000469417 MMRN1Q13201 1228 aa13□□□□□ -0.33
PEX1-205ENST00000469417 ERBB3P21860 1342 aa12.97□□□□□ -0.33
PEX1-205ENST00000469417 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
PEX1-205ENST00000469417 C2orf72A6NCS6 295 aa12.93□□□□□ -0.34
PEX1-205ENST00000469417 PPP1R37O75864 691 aa12.91□□□□□ -0.34
PEX1-205ENST00000469417 VARS2Q5ST30 1063 aaKnown RBP12.9□□□□□ -0.34
PEX1-205ENST00000469417 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
PEX1-205ENST00000469417 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
PEX1-205ENST00000469417 SLC34A2O95436 690 aa12.88□□□□□ -0.35
PEX1-205ENST00000469417 ZNF687Q8N1G0 1237 aa12.87□□□□□ -0.35
PEX1-205ENST00000469417 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
PEX1-205ENST00000469417 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.36
PEX1-205ENST00000469417 ZNF316A6NFI3 1004 aaPredicted RBP12.81□□□□□ -0.36
PEX1-205ENST00000469417 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
PEX1-205ENST00000469417 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
PEX1-205ENST00000469417 PCDHGA4Q9Y5G9 962 aa12.77□□□□□ -0.37
PEX1-205ENST00000469417 FOXK1P85037 733 aa12.74□□□□□ -0.37
PEX1-205ENST00000469417 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
PEX1-205ENST00000469417 KDM4FA0A1W2PPD8 638 aa12.73□□□□□ -0.37
PEX1-205ENST00000469417 NUDT7P0C024 238 aa12.73□□□□□ -0.37
PEX1-205ENST00000469417 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
PEX1-205ENST00000469417 RYDENQ9NUL5 291 aaKnown RBP12.71□□□□□ -0.37
PEX1-205ENST00000469417 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
PEX1-205ENST00000469417 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
PEX1-205ENST00000469417 PBX2P40425 430 aa12.66□□□□□ -0.38
PEX1-205ENST00000469417 PTGER2P43116 358 aa12.66□□□□□ -0.38
PEX1-205ENST00000469417 DSG2Q14126 1118 aa12.65□□□□□ -0.38
PEX1-205ENST00000469417 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
PEX1-205ENST00000469417 LSM11P83369 360 aaKnown RBP eCLIP12.63□□□□□ -0.39
PEX1-205ENST00000469417 RNF166Q96A37 237 aaPredicted RBP12.63□□□□□ -0.39
PEX1-205ENST00000469417 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
PEX1-205ENST00000469417 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
PEX1-205ENST00000469417 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
PEX1-205ENST00000469417 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
PEX1-205ENST00000469417 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
PEX1-205ENST00000469417 TBC1D12O60347 775 aa12.55□□□□□ -0.4
PEX1-205ENST00000469417 OXER1Q8TDS5 423 aa12.55□□□□□ -0.4
PEX1-205ENST00000469417 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
PEX1-205ENST00000469417 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
PEX1-205ENST00000469417 ARHGAP33O14559 1287 aa12.52□□□□□ -0.41
PEX1-205ENST00000469417 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
PEX1-205ENST00000469417 PDE4AP27815 886 aa12.49□□□□□ -0.41
PEX1-205ENST00000469417 TK2O00142 265 aa12.46□□□□□ -0.41
PEX1-205ENST00000469417 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
PEX1-205ENST00000469417 ADGRD1Q6QNK2 874 aa12.45□□□□□ -0.42
PEX1-205ENST00000469417 MFSD10Q14728 455 aa12.44□□□□□ -0.42
PEX1-205ENST00000469417 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
PEX1-205ENST00000469417 HRO43593 1189 aa12.41□□□□□ -0.42
PEX1-205ENST00000469417 PSEN2P49810 448 aa12.41□□□□□ -0.42
PEX1-205ENST00000469417 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
PEX1-205ENST00000469417 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
PEX1-205ENST00000469417 DDX27Q96GQ7 796 aaKnown RBP12.39□□□□□ -0.43
PEX1-205ENST00000469417 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
PEX1-205ENST00000469417 DCAF8L2P0C7V8 631 aa12.37□□□□□ -0.43
PEX1-205ENST00000469417 FOSBP53539 338 aa12.36□□□□□ -0.43
PEX1-205ENST00000469417 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
PEX1-205ENST00000469417 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
PEX1-205ENST00000469417 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
PEX1-205ENST00000469417 EVI5O60447 810 aa12.32□□□□□ -0.44
PEX1-205ENST00000469417 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
PEX1-205ENST00000469417 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
PEX1-205ENST00000469417 SLC4A5Q9BY07 1137 aa12.32□□□□□ -0.44
PEX1-205ENST00000469417 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
PEX1-205ENST00000469417 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
PEX1-205ENST00000469417 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
PEX1-205ENST00000469417 VPS9D1Q9Y2B5 631 aa12.29□□□□□ -0.44
PEX1-205ENST00000469417 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.45
PEX1-205ENST00000469417 MAP3K9P80192 1104 aa12.26□□□□□ -0.45
PEX1-205ENST00000469417 CAMK2BQ13554 666 aa12.26□□□□□ -0.45
PEX1-205ENST00000469417 PTPREP23469 700 aa12.25□□□□□ -0.45
PEX1-205ENST00000469417 ZDHHC16Q969W1 377 aa12.25□□□□□ -0.45
PEX1-205ENST00000469417 BHMG1C9JSJ3 638 aaPredicted RBP12.23□□□□□ -0.45
PEX1-205ENST00000469417 ADAM33Q9BZ11 813 aa12.23□□□□□ -0.45
PEX1-205ENST00000469417 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
PEX1-205ENST00000469417 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
PEX1-205ENST00000469417 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
PEX1-205ENST00000469417 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
PEX1-205ENST00000469417 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
PEX1-205ENST00000469417 PHF14O94880 888 aa12.15□□□□□ -0.46
PEX1-205ENST00000469417 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
PEX1-205ENST00000469417 FBXW7Q969H0 707 aa12.15□□□□□ -0.46
PEX1-205ENST00000469417 PPP1R3GB7ZBB8 358 aa12.13□□□□□ -0.47
PEX1-205ENST00000469417 TYW1BQ6NUM6 668 aa12.12□□□□□ -0.47
PEX1-205ENST00000469417 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
PEX1-205ENST00000469417 DPYSL4O14531 572 aa12.09□□□□□ -0.47
PEX1-205ENST00000469417 EPAS1Q99814 870 aa12.09□□□□□ -0.47
PEX1-205ENST00000469417 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
PEX1-205ENST00000469417 MRPL50Q8N5N7 158 aaKnown RBP12.08□□□□□ -0.48
PEX1-205ENST00000469417 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
PEX1-205ENST00000469417 COL9A1P20849 921 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms