RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 EPRSP07814 1512 aaKnown RBP16.64■□□□□ 0.25
VARS2-205ENST00000469358 KIF7Q2M1P5 1343 aa16.63■□□□□ 0.25
VARS2-205ENST00000469358 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
VARS2-205ENST00000469358 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
VARS2-205ENST00000469358 NCOA1Q15788 1441 aa16.6■□□□□ 0.25
VARS2-205ENST00000469358 PPP4R2Q9NY27 417 aa16.6■□□□□ 0.25
VARS2-205ENST00000469358 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
VARS2-205ENST00000469358 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
VARS2-205ENST00000469358 HECW1Q76N89 1606 aa16.58■□□□□ 0.24
VARS2-205ENST00000469358 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
VARS2-205ENST00000469358 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
VARS2-205ENST00000469358 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
VARS2-205ENST00000469358 ABCC5O15440 1437 aa16.55■□□□□ 0.24
VARS2-205ENST00000469358 DAPK1P53355 1430 aa16.54■□□□□ 0.24
VARS2-205ENST00000469358 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
VARS2-205ENST00000469358 FANCIQ9NVI1 1328 aa16.54■□□□□ 0.24
VARS2-205ENST00000469358 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
VARS2-205ENST00000469358 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
VARS2-205ENST00000469358 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.24
VARS2-205ENST00000469358 IQGAP2Q13576 1575 aa16.52■□□□□ 0.24
VARS2-205ENST00000469358 MIA2Q96PC5 1412 aa16.52■□□□□ 0.24
VARS2-205ENST00000469358 TEX14Q8IWB6 1497 aa16.52■□□□□ 0.24
VARS2-205ENST00000469358 TARBP1Q13395 1621 aaKnown RBP16.51■□□□□ 0.23
VARS2-205ENST00000469358 WDR62O43379 1518 aa16.5■□□□□ 0.23
VARS2-205ENST00000469358 SPATA31E1Q6ZUB1 1445 aa16.5■□□□□ 0.23
VARS2-205ENST00000469358 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
VARS2-205ENST00000469358 PKD2Q13563 968 aa16.48■□□□□ 0.23
VARS2-205ENST00000469358 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
VARS2-205ENST00000469358 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
VARS2-205ENST00000469358 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
VARS2-205ENST00000469358 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
VARS2-205ENST00000469358 DHX29Q7Z478 1369 aaKnown RBP16.44■□□□□ 0.22
VARS2-205ENST00000469358 USP47Q96K76 1375 aa16.44■□□□□ 0.22
VARS2-205ENST00000469358 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
VARS2-205ENST00000469358 FBLN2P98095 1184 aa16.44■□□□□ 0.22
VARS2-205ENST00000469358 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
VARS2-205ENST00000469358 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
VARS2-205ENST00000469358 PZPP20742 1482 aa16.43■□□□□ 0.22
VARS2-205ENST00000469358 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
VARS2-205ENST00000469358 PAK3O75914 559 aaPredicted RBP16.42■□□□□ 0.22
VARS2-205ENST00000469358 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
VARS2-205ENST00000469358 NBR1Q14596 966 aa16.41■□□□□ 0.22
VARS2-205ENST00000469358 DISP1Q96F81 1524 aa16.41■□□□□ 0.22
VARS2-205ENST00000469358 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.22
VARS2-205ENST00000469358 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
VARS2-205ENST00000469358 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
VARS2-205ENST00000469358 TMC1Q8TDI8 760 aa16.38■□□□□ 0.21
VARS2-205ENST00000469358 NUDCQ9Y266 331 aa16.38■□□□□ 0.21
VARS2-205ENST00000469358 CARD11Q9BXL7 1154 aa16.38■□□□□ 0.21
VARS2-205ENST00000469358 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
VARS2-205ENST00000469358 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
VARS2-205ENST00000469358 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
VARS2-205ENST00000469358 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
VARS2-205ENST00000469358 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
VARS2-205ENST00000469358 KIAA1107Q9UPP5 1409 aa16.34■□□□□ 0.21
VARS2-205ENST00000469358 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
VARS2-205ENST00000469358 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.21
VARS2-205ENST00000469358 NUP155O75694 1391 aa16.33■□□□□ 0.2
VARS2-205ENST00000469358 GPATCH8Q9UKJ3 1502 aaKnown RBP16.32■□□□□ 0.2
VARS2-205ENST00000469358 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
VARS2-205ENST00000469358 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
VARS2-205ENST00000469358 KIF14Q15058 1648 aa16.31■□□□□ 0.2
VARS2-205ENST00000469358 MBD5Q9P267 1494 aa16.31■□□□□ 0.2
VARS2-205ENST00000469358 TROQ12816 1431 aaPredicted RBP16.31■□□□□ 0.2
VARS2-205ENST00000469358 CHMP7Q8WUX9 453 aaPredicted RBP16.31■□□□□ 0.2
VARS2-205ENST00000469358 RAPGEF6Q8TEU7 1601 aa16.3■□□□□ 0.2
VARS2-205ENST00000469358 ANKRD50Q9ULJ7 1429 aa16.3■□□□□ 0.2
VARS2-205ENST00000469358 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
VARS2-205ENST00000469358 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
VARS2-205ENST00000469358 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
VARS2-205ENST00000469358 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
VARS2-205ENST00000469358 ANKRD30AQ9BXX3 1397 aa16.28■□□□□ 0.2
VARS2-205ENST00000469358 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.19
VARS2-205ENST00000469358 EXOC6Q8TAG9 804 aa16.27■□□□□ 0.19
VARS2-205ENST00000469358 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
VARS2-205ENST00000469358 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
VARS2-205ENST00000469358 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
VARS2-205ENST00000469358 KDM5CP41229 1560 aa16.25■□□□□ 0.19
VARS2-205ENST00000469358 CDCA7LQ96GN5 454 aa16.24■□□□□ 0.19
VARS2-205ENST00000469358 NBPF1Q3BBV0 1214 aa16.24■□□□□ 0.19
VARS2-205ENST00000469358 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
VARS2-205ENST00000469358 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
VARS2-205ENST00000469358 PLEKHD1A6NEE1 506 aa16.23■□□□□ 0.19
VARS2-205ENST00000469358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.195e-7■□□□□ 9.5
VARS2-205ENST00000469358 PLIN1O60240 522 aa16.22■□□□□ 0.19
VARS2-205ENST00000469358 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
VARS2-205ENST00000469358 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
VARS2-205ENST00000469358 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
VARS2-205ENST00000469358 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
VARS2-205ENST00000469358 IFT140Q96RY7 1462 aa16.21■□□□□ 0.18
VARS2-205ENST00000469358 ROCK2O75116 1388 aaKnown RBP16.2■□□□□ 0.18
VARS2-205ENST00000469358 ANP32AP39687 249 aaKnown RBP16.2■□□□□ 0.18
VARS2-205ENST00000469358 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
VARS2-205ENST00000469358 C9orf84Q5VXU9 1444 aa16.2■□□□□ 0.18
VARS2-205ENST00000469358 RRP1P56182 461 aaKnown RBP16.19■□□□□ 0.18
VARS2-205ENST00000469358 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
VARS2-205ENST00000469358 RALGAPBQ86X10 1494 aa16.18■□□□□ 0.18
VARS2-205ENST00000469358 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
VARS2-205ENST00000469358 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
VARS2-205ENST00000469358 LRPPRCP42704 1394 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms