RNA–Protein interactions for RNA: ENST00000469271.1

NOM1-203, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 1 (best)

Gene NOM1, Length 1,209 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-203ENST00000469271 RAPGEF3O95398 923 aa32.27■■■□□ 2.76
NOM1-203ENST00000469271 APLP2Q06481 763 aa32.27■■■□□ 2.76
NOM1-203ENST00000469271 CCNB3Q8WWL7 1395 aa32.26■■■□□ 2.75
NOM1-203ENST00000469271 CDC42BPBQ9Y5S2 1711 aa32.26■■■□□ 2.75
NOM1-203ENST00000469271 CDC42BPAQ5VT25 1732 aa32.25■■■□□ 2.75
NOM1-203ENST00000469271 LRRC9Q6ZRR7 1453 aa32.24■■■□□ 2.75
NOM1-203ENST00000469271 GPATCH8Q9UKJ3 1502 aaKnown RBP32.24■■■□□ 2.75
NOM1-203ENST00000469271 SCAPERQ9BY12 1400 aa32.24■■■□□ 2.75
NOM1-203ENST00000469271 SUPT6HQ7KZ85 1726 aaKnown RBP32.21■■■□□ 2.75
NOM1-203ENST00000469271 FRMPD1Q5SYB0 1578 aa32.21■■■□□ 2.75
NOM1-203ENST00000469271 RICTORQ6R327 1708 aa32.2■■■□□ 2.74
NOM1-203ENST00000469271 POGZQ7Z3K3 1410 aa32.19■■■□□ 2.74
NOM1-203ENST00000469271 NCOA2Q15596 1464 aa32.17■■■□□ 2.74
NOM1-203ENST00000469271 CFDP1Q9UEE9 299 aaPredicted RBP32.17■■■□□ 2.74
NOM1-203ENST00000469271 ZMYM4Q5VZL5 1548 aa32.15■■■□□ 2.74
NOM1-203ENST00000469271 ITSN2Q9NZM3 1697 aa32.15■■■□□ 2.74
NOM1-203ENST00000469271 ZNF518AQ6AHZ1 1483 aa32.14■■■□□ 2.74
NOM1-203ENST00000469271 ABCC1P33527 1531 aa32.12■■■□□ 2.73
NOM1-203ENST00000469271 MAGI2Q86UL8 1455 aa32.12■■■□□ 2.73
NOM1-203ENST00000469271 KANK4Q5T7N3 995 aaPredicted RBP32.11■■■□□ 2.73
NOM1-203ENST00000469271 PLEKHH2Q8IVE3 1493 aa32.1■■■□□ 2.73
NOM1-203ENST00000469271 ZNF777Q9ULD5 760 aaPredicted RBP32.1■■■□□ 2.73
NOM1-203ENST00000469271 SAMD9LQ8IVG5 1584 aa32.07■■■□□ 2.72
NOM1-203ENST00000469271 KIAA1107Q9UPP5 1409 aa32.06■■■□□ 2.72
NOM1-203ENST00000469271 ARHGEF40Q8TER5 1519 aa32.05■■■□□ 2.72
NOM1-203ENST00000469271 KDM5CP41229 1560 aa32.03■■■□□ 2.72
NOM1-203ENST00000469271 ZFYVE16Q7Z3T8 1539 aa32.03■■■□□ 2.72
NOM1-203ENST00000469271 ARHGEF12Q9NZN5 1544 aa32.02■■■□□ 2.72
NOM1-203ENST00000469271 AFAP1Q8N556 730 aa32.02■■■□□ 2.72
NOM1-203ENST00000469271 SYCP2Q9BX26 1530 aa32■■■□□ 2.71
NOM1-203ENST00000469271 TRAPPC8Q9Y2L5 1435 aa31.99■■■□□ 2.71
NOM1-203ENST00000469271 HECW2Q9P2P5 1572 aa31.95■■■□□ 2.71
NOM1-203ENST00000469271 YEATS2Q9ULM3 1422 aa31.95■■■□□ 2.71
NOM1-203ENST00000469271 MLH3Q9UHC1 1453 aa31.95■■■□□ 2.7
NOM1-203ENST00000469271 HNRNPMP52272 730 aaKnown RBP eCLIP31.94■■■□□ 2.7
NOM1-203ENST00000469271 MYOM3Q5VTT5 1437 aa31.93■■■□□ 2.7
NOM1-203ENST00000469271 MYT1LQ9UL68 1186 aa31.93■■■□□ 2.7
NOM1-203ENST00000469271 ZNF644Q9H582 1327 aaPredicted RBP31.92■■■□□ 2.7
NOM1-203ENST00000469271 MIA2Q96PC5 1412 aa31.92■■■□□ 2.7
NOM1-203ENST00000469271 KDM4FA0A1W2PPD8 638 aa31.9■■■□□ 2.7
NOM1-203ENST00000469271 ATP10AO60312 1499 aa31.9■■■□□ 2.7
NOM1-203ENST00000469271 CAMSAP2Q08AD1 1489 aa31.9■■■□□ 2.7
NOM1-203ENST00000469271 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
NOM1-203ENST00000469271 MBD5Q9P267 1494 aa31.87■■■□□ 2.69
NOM1-203ENST00000469271 C9orf84Q5VXU9 1444 aa31.87■■■□□ 2.69
NOM1-203ENST00000469271 ARID4BQ4LE39 1312 aaPredicted RBP31.87■■■□□ 2.69
NOM1-203ENST00000469271 RSPH4AQ5TD94 716 aa31.87■■■□□ 2.69
NOM1-203ENST00000469271 SPAG9O60271 1321 aaKnown RBP31.86■■■□□ 2.69
NOM1-203ENST00000469271 DIP2CQ9Y2E4 1556 aa31.81■■■□□ 2.68
NOM1-203ENST00000469271 CCDC141Q6ZP82 1450 aa31.8■■■□□ 2.68
NOM1-203ENST00000469271 KIDINS220Q9ULH0 1771 aa31.79■■■□□ 2.68
NOM1-203ENST00000469271 ARHGEF5Q12774 1597 aa31.78■■■□□ 2.68
NOM1-203ENST00000469271 REREQ9P2R6 1566 aa31.78■■■□□ 2.68
NOM1-203ENST00000469271 ATP7AQ04656 1500 aa31.78■■■□□ 2.68
NOM1-203ENST00000469271 ABCA6Q8N139 1617 aa31.78■■■□□ 2.68
NOM1-203ENST00000469271 INO80Q9ULG1 1556 aaPredicted RBP31.77■■■□□ 2.68
NOM1-203ENST00000469271 RTEL1-TNFRSF6BF6WH68 1400 aa31.75■■■□□ 2.67
NOM1-203ENST00000469271 FGD6Q6ZV73 1430 aa31.75■■■□□ 2.67
NOM1-203ENST00000469271 BCORL1Q5H9F3 1711 aa31.74■■■□□ 2.67
NOM1-203ENST00000469271 TSPY4P0CV99 314 aa31.71■■■□□ 2.67
NOM1-203ENST00000469271 TSPY10P0CW01 314 aa31.71■■■□□ 2.67
NOM1-203ENST00000469271 PTPN23Q9H3S7 1636 aa31.71■■■□□ 2.67
NOM1-203ENST00000469271 ADAMTSL3P82987 1691 aa31.7■■■□□ 2.66
NOM1-203ENST00000469271 SIGLEC1Q9BZZ2 1709 aa31.69■■■□□ 2.66
NOM1-203ENST00000469271 TCOF1Q13428 1488 aaKnown RBP31.67■■■□□ 2.66
NOM1-203ENST00000469271 AGLP35573 1532 aa31.67■■■□□ 2.66
NOM1-203ENST00000469271 A2MP01023 1474 aa31.63■■■□□ 2.65
NOM1-203ENST00000469271 ADGBQ8N7X0 1667 aa31.62■■■□□ 2.65
NOM1-203ENST00000469271 MLECQ14165 292 aa31.6■■■□□ 2.65
NOM1-203ENST00000469271 MADDQ8WXG6 1647 aa31.6■■■□□ 2.65
NOM1-203ENST00000469271 MAST1Q9Y2H9 1570 aa31.6■■■□□ 2.65
NOM1-203ENST00000469271 PLXNC1O60486 1568 aa31.59■■■□□ 2.65
NOM1-203ENST00000469271 SHANK2Q9UPX8 1470 aa31.57■■■□□ 2.64
NOM1-203ENST00000469271 DHX29Q7Z478 1369 aaKnown RBP31.55■■■□□ 2.64
NOM1-203ENST00000469271 PTPRMP28827 1452 aa31.54■■■□□ 2.64
NOM1-203ENST00000469271 PPARGC1BQ86YN6 1023 aaKnown RBP31.54■■■□□ 2.64
NOM1-203ENST00000469271 ABCC5O15440 1437 aa31.54■■■□□ 2.64
NOM1-203ENST00000469271 DNMT1P26358 1616 aaKnown RBP31.53■■■□□ 2.64
NOM1-203ENST00000469271 DAPK1P53355 1430 aa31.53■■■□□ 2.64
NOM1-203ENST00000469271 FAM50AQ14320 339 aaKnown RBP31.52■■■□□ 2.64
NOM1-203ENST00000469271 CROCC2H7BZ55 1655 aa31.51■■■□□ 2.63
NOM1-203ENST00000469271 FER1L4A9Z1Z3 1794 aa31.51■■■□□ 2.63
NOM1-203ENST00000469271 RIMS1Q86UR5 1692 aaKnown RBP31.49■■■□□ 2.63
NOM1-203ENST00000469271 ESF1Q9H501 851 aaKnown RBP31.47■■■□□ 2.63
NOM1-203ENST00000469271 CNTLNQ9NXG0 1405 aa31.43■■■□□ 2.62
NOM1-203ENST00000469271 PPP6R1Q9UPN7 881 aa31.43■■■□□ 2.62
NOM1-203ENST00000469271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.42■■■□□ 2.62
NOM1-203ENST00000469271 ANKRD30AQ9BXX3 1397 aa31.4■■■□□ 2.62
NOM1-203ENST00000469271 DUOX2Q9NRD8 1548 aa31.39■■■□□ 2.62
NOM1-203ENST00000469271 KIF15Q9NS87 1388 aa31.39■■■□□ 2.62
NOM1-203ENST00000469271 KIF3BO15066 747 aa31.38■■■□□ 2.61
NOM1-203ENST00000469271 GGT6Q6P531 493 aa31.38■■■□□ 2.61
NOM1-203ENST00000469271 EIF2AK4Q9P2K8 1649 aaKnown RBP31.34■■■□□ 2.61
NOM1-203ENST00000469271 ADGRL2O95490 1459 aa31.33■■■□□ 2.61
NOM1-203ENST00000469271 RRBP1Q9P2E9 1410 aaKnown RBP31.33■■■□□ 2.61
NOM1-203ENST00000469271 RRP7BPQ9NSQ0 103 aa31.33■■■□□ 2.61
NOM1-203ENST00000469271 CHIC2Q9UKJ5 165 aa31.33■■■□□ 2.61
NOM1-203ENST00000469271 NCOA1Q15788 1441 aa31.32■■■□□ 2.61
NOM1-203ENST00000469271 ERBINQ96RT1 1412 aa31.32■■■□□ 2.61
NOM1-203ENST00000469271 FAM135AQ9P2D6 1515 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms