RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 ITSN2Q9NZM3 1697 aa13.43□□□□□ -0.26
SSBP1-208ENST00000469123 ARHGAP5Q13017 1502 aa13.43□□□□□ -0.26
SSBP1-208ENST00000469123 CCNB3Q8WWL7 1395 aa13.43□□□□□ -0.26
SSBP1-208ENST00000469123 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
SSBP1-208ENST00000469123 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
SSBP1-208ENST00000469123 DENND4BO75064 1496 aaPredicted RBP13.41□□□□□ -0.26
SSBP1-208ENST00000469123 ADGRL1O94910 1474 aa13.4□□□□□ -0.26
SSBP1-208ENST00000469123 COL17A1Q9UMD9 1497 aaPredicted RBP13.4□□□□□ -0.26
SSBP1-208ENST00000469123 GPATCH8Q9UKJ3 1502 aaKnown RBP13.39□□□□□ -0.27
SSBP1-208ENST00000469123 PLEKHH2Q8IVE3 1493 aa13.39□□□□□ -0.27
SSBP1-208ENST00000469123 NCOA2Q15596 1464 aa13.38□□□□□ -0.27
SSBP1-208ENST00000469123 RICTORQ6R327 1708 aa13.37□□□□□ -0.27
SSBP1-208ENST00000469123 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
SSBP1-208ENST00000469123 MAGI2Q86UL8 1455 aa13.36□□□□□ -0.27
SSBP1-208ENST00000469123 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
SSBP1-208ENST00000469123 CFDP1Q9UEE9 299 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-208ENST00000469123 POGZQ7Z3K3 1410 aa13.36□□□□□ -0.27
SSBP1-208ENST00000469123 SCAPERQ9BY12 1400 aa13.36□□□□□ -0.27
SSBP1-208ENST00000469123 ABCC1P33527 1531 aa13.35□□□□□ -0.27
SSBP1-208ENST00000469123 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
SSBP1-208ENST00000469123 FRMPD1Q5SYB0 1578 aa13.34□□□□□ -0.27
SSBP1-208ENST00000469123 MIA2Q96PC5 1412 aa13.32□□□□□ -0.28
SSBP1-208ENST00000469123 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
SSBP1-208ENST00000469123 KDM5CP41229 1560 aa13.32□□□□□ -0.28
SSBP1-208ENST00000469123 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
SSBP1-208ENST00000469123 ARHGEF40Q8TER5 1519 aa13.31□□□□□ -0.28
SSBP1-208ENST00000469123 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-208ENST00000469123 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
SSBP1-208ENST00000469123 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
SSBP1-208ENST00000469123 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
SSBP1-208ENST00000469123 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
SSBP1-208ENST00000469123 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
SSBP1-208ENST00000469123 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
SSBP1-208ENST00000469123 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
SSBP1-208ENST00000469123 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.29
SSBP1-208ENST00000469123 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
SSBP1-208ENST00000469123 ARHGEF5Q12774 1597 aa13.25□□□□□ -0.29
SSBP1-208ENST00000469123 TRAPPC8Q9Y2L5 1435 aa13.25□□□□□ -0.29
SSBP1-208ENST00000469123 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
SSBP1-208ENST00000469123 MBD5Q9P267 1494 aa13.24□□□□□ -0.29
SSBP1-208ENST00000469123 AFAP1Q8N556 730 aa13.24□□□□□ -0.29
SSBP1-208ENST00000469123 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
SSBP1-208ENST00000469123 ATP10AO60312 1499 aa13.23□□□□□ -0.29
SSBP1-208ENST00000469123 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
SSBP1-208ENST00000469123 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
SSBP1-208ENST00000469123 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
SSBP1-208ENST00000469123 SPAG9O60271 1321 aaKnown RBP13.22□□□□□ -0.29
SSBP1-208ENST00000469123 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
SSBP1-208ENST00000469123 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
SSBP1-208ENST00000469123 INO80Q9ULG1 1556 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-208ENST00000469123 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSBP1-208ENST00000469123 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
SSBP1-208ENST00000469123 ATP7AQ04656 1500 aa13.21□□□□□ -0.29
SSBP1-208ENST00000469123 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.29
SSBP1-208ENST00000469123 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
SSBP1-208ENST00000469123 DIP2CQ9Y2E4 1556 aa13.2□□□□□ -0.3
SSBP1-208ENST00000469123 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
SSBP1-208ENST00000469123 TSPY4P0CV99 314 aa13.19□□□□□ -0.3
SSBP1-208ENST00000469123 TSPY10P0CW01 314 aa13.19□□□□□ -0.3
SSBP1-208ENST00000469123 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
SSBP1-208ENST00000469123 MAST1Q9Y2H9 1570 aa13.18□□□□□ -0.3
SSBP1-208ENST00000469123 AGLP35573 1532 aa13.18□□□□□ -0.3
SSBP1-208ENST00000469123 ADGBQ8N7X0 1667 aa13.18□□□□□ -0.3
SSBP1-208ENST00000469123 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
SSBP1-208ENST00000469123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSBP1-208ENST00000469123 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
SSBP1-208ENST00000469123 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-208ENST00000469123 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
SSBP1-208ENST00000469123 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.31
SSBP1-208ENST00000469123 PLXNC1O60486 1568 aa13.14□□□□□ -0.31
SSBP1-208ENST00000469123 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
SSBP1-208ENST00000469123 A2MP01023 1474 aa13.13□□□□□ -0.31
SSBP1-208ENST00000469123 DAPK1P53355 1430 aa13.13□□□□□ -0.31
SSBP1-208ENST00000469123 ABCC5O15440 1437 aa13.11□□□□□ -0.31
SSBP1-208ENST00000469123 DHX29Q7Z478 1369 aaKnown RBP13.1□□□□□ -0.31
SSBP1-208ENST00000469123 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
SSBP1-208ENST00000469123 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
SSBP1-208ENST00000469123 FAM50AQ14320 339 aaKnown RBP13.09□□□□□ -0.31
SSBP1-208ENST00000469123 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
SSBP1-208ENST00000469123 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
SSBP1-208ENST00000469123 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
SSBP1-208ENST00000469123 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.31
SSBP1-208ENST00000469123 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.31
SSBP1-208ENST00000469123 FER1L4A9Z1Z3 1794 aa13.08□□□□□ -0.32
SSBP1-208ENST00000469123 EIF2AK4Q9P2K8 1649 aaKnown RBP13.08□□□□□ -0.32
SSBP1-208ENST00000469123 ADGRL2O95490 1459 aa13.08□□□□□ -0.32
SSBP1-208ENST00000469123 CNTLNQ9NXG0 1405 aa13.07□□□□□ -0.32
SSBP1-208ENST00000469123 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
SSBP1-208ENST00000469123 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
SSBP1-208ENST00000469123 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
SSBP1-208ENST00000469123 ESF1Q9H501 851 aaKnown RBP13.05□□□□□ -0.32
SSBP1-208ENST00000469123 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
SSBP1-208ENST00000469123 NCOA1Q15788 1441 aa13.04□□□□□ -0.32
SSBP1-208ENST00000469123 PTPRMP28827 1452 aa13.04□□□□□ -0.32
SSBP1-208ENST00000469123 RIMS1Q86UR5 1692 aaKnown RBP13.03□□□□□ -0.32
SSBP1-208ENST00000469123 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
SSBP1-208ENST00000469123 MROH2AA6NES4 1674 aa13.02□□□□□ -0.32
SSBP1-208ENST00000469123 MLECQ14165 292 aa13.02□□□□□ -0.33
SSBP1-208ENST00000469123 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.33
SSBP1-208ENST00000469123 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms