RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 GPATCH8Q9UKJ3 1502 aaKnown RBP17.41■□□□□ 0.38
SNU13-206ENST00000469028 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
SNU13-206ENST00000469028 RAPGEF3O95398 923 aa17.4■□□□□ 0.38
SNU13-206ENST00000469028 DENND4BO75064 1496 aaPredicted RBP17.39■□□□□ 0.37
SNU13-206ENST00000469028 ADGRL1O94910 1474 aa17.39■□□□□ 0.37
SNU13-206ENST00000469028 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
SNU13-206ENST00000469028 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
SNU13-206ENST00000469028 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
SNU13-206ENST00000469028 SCAPERQ9BY12 1400 aa17.37■□□□□ 0.37
SNU13-206ENST00000469028 NCOA2Q15596 1464 aa17.37■□□□□ 0.37
SNU13-206ENST00000469028 SUPT6HQ7KZ85 1726 aaKnown RBP17.36■□□□□ 0.37
SNU13-206ENST00000469028 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
SNU13-206ENST00000469028 POGZQ7Z3K3 1410 aa17.35■□□□□ 0.37
SNU13-206ENST00000469028 ABCC1P33527 1531 aa17.34■□□□□ 0.37
SNU13-206ENST00000469028 SAMD9LQ8IVG5 1584 aa17.34■□□□□ 0.37
SNU13-206ENST00000469028 ARHGEF12Q9NZN5 1544 aa17.33■□□□□ 0.37
SNU13-206ENST00000469028 ZMYM4Q5VZL5 1548 aa17.32■□□□□ 0.36
SNU13-206ENST00000469028 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
SNU13-206ENST00000469028 CFDP1Q9UEE9 299 aaPredicted RBP17.29■□□□□ 0.36
SNU13-206ENST00000469028 ZNF777Q9ULD5 760 aaPredicted RBP17.29■□□□□ 0.36
SNU13-206ENST00000469028 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
SNU13-206ENST00000469028 KDM5CP41229 1560 aa17.28■□□□□ 0.36
SNU13-206ENST00000469028 ARHGEF40Q8TER5 1519 aa17.28■□□□□ 0.36
SNU13-206ENST00000469028 SYCP2Q9BX26 1530 aa17.28■□□□□ 0.36
SNU13-206ENST00000469028 APLP2Q06481 763 aa17.28■□□□□ 0.36
SNU13-206ENST00000469028 ZNF518AQ6AHZ1 1483 aa17.28■□□□□ 0.36
SNU13-206ENST00000469028 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
SNU13-206ENST00000469028 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
SNU13-206ENST00000469028 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
SNU13-206ENST00000469028 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
SNU13-206ENST00000469028 MAGI2Q86UL8 1455 aa17.24■□□□□ 0.35
SNU13-206ENST00000469028 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
SNU13-206ENST00000469028 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
SNU13-206ENST00000469028 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
SNU13-206ENST00000469028 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNU13-206ENST00000469028 CAMSAP2Q08AD1 1489 aa17.22■□□□□ 0.35
SNU13-206ENST00000469028 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
SNU13-206ENST00000469028 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
SNU13-206ENST00000469028 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.35
SNU13-206ENST00000469028 KDM4FA0A1W2PPD8 638 aa17.21■□□□□ 0.35
SNU13-206ENST00000469028 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
SNU13-206ENST00000469028 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
SNU13-206ENST00000469028 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
SNU13-206ENST00000469028 MIA2Q96PC5 1412 aa17.18■□□□□ 0.34
SNU13-206ENST00000469028 KIDINS220Q9ULH0 1771 aa17.17■□□□□ 0.34
SNU13-206ENST00000469028 INO80Q9ULG1 1556 aaPredicted RBP17.16■□□□□ 0.34
SNU13-206ENST00000469028 ATP10AO60312 1499 aa17.16■□□□□ 0.34
SNU13-206ENST00000469028 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
SNU13-206ENST00000469028 ATP7AQ04656 1500 aa17.14■□□□□ 0.33
SNU13-206ENST00000469028 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
SNU13-206ENST00000469028 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
SNU13-206ENST00000469028 ARHGEF5Q12774 1597 aa17.13■□□□□ 0.33
SNU13-206ENST00000469028 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
SNU13-206ENST00000469028 BCORL1Q5H9F3 1711 aa17.13■□□□□ 0.33
SNU13-206ENST00000469028 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
SNU13-206ENST00000469028 REREQ9P2R6 1566 aa17.12■□□□□ 0.33
SNU13-206ENST00000469028 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
SNU13-206ENST00000469028 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
SNU13-206ENST00000469028 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
SNU13-206ENST00000469028 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
SNU13-206ENST00000469028 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
SNU13-206ENST00000469028 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.32
SNU13-206ENST00000469028 RSPH4AQ5TD94 716 aa17.07■□□□□ 0.32
SNU13-206ENST00000469028 MADDQ8WXG6 1647 aa17.07■□□□□ 0.32
SNU13-206ENST00000469028 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
SNU13-206ENST00000469028 AGLP35573 1532 aa17.06■□□□□ 0.32
SNU13-206ENST00000469028 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
SNU13-206ENST00000469028 MAST1Q9Y2H9 1570 aa17.05■□□□□ 0.32
SNU13-206ENST00000469028 A2MP01023 1474 aa17.04■□□□□ 0.32
SNU13-206ENST00000469028 ABCC5O15440 1437 aa17.04■□□□□ 0.32
SNU13-206ENST00000469028 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
SNU13-206ENST00000469028 MLECQ14165 292 aa17.03■□□□□ 0.32
SNU13-206ENST00000469028 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
SNU13-206ENST00000469028 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
SNU13-206ENST00000469028 DAPK1P53355 1430 aa17.02■□□□□ 0.31
SNU13-206ENST00000469028 TSPY4P0CV99 314 aa17.01■□□□□ 0.31
SNU13-206ENST00000469028 TSPY10P0CW01 314 aa17.01■□□□□ 0.31
SNU13-206ENST00000469028 RIMS1Q86UR5 1692 aaKnown RBP17.01■□□□□ 0.31
SNU13-206ENST00000469028 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
SNU13-206ENST00000469028 PTPRMP28827 1452 aa16.99■□□□□ 0.31
SNU13-206ENST00000469028 FER1L4A9Z1Z3 1794 aa16.99■□□□□ 0.31
SNU13-206ENST00000469028 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
SNU13-206ENST00000469028 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
SNU13-206ENST00000469028 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
SNU13-206ENST00000469028 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
SNU13-206ENST00000469028 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
SNU13-206ENST00000469028 ADGRL2O95490 1459 aa16.91■□□□□ 0.3
SNU13-206ENST00000469028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNU13-206ENST00000469028 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
SNU13-206ENST00000469028 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
SNU13-206ENST00000469028 GGT6Q6P531 493 aa16.89■□□□□ 0.29
SNU13-206ENST00000469028 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
SNU13-206ENST00000469028 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
SNU13-206ENST00000469028 KIF3BO15066 747 aa16.88■□□□□ 0.29
SNU13-206ENST00000469028 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
SNU13-206ENST00000469028 ANKRD30AQ9BXX3 1397 aa16.88■□□□□ 0.29
SNU13-206ENST00000469028 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
SNU13-206ENST00000469028 RNF17Q9BXT8 1623 aaKnown RBP16.87■□□□□ 0.29
SNU13-206ENST00000469028 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
SNU13-206ENST00000469028 C3P01024 1663 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms