RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 SOX12O15370 315 aa8.3□□□□□ -1.08
SMG5-202ENST00000468993 CRISPLD2Q9H0B8 497 aa8.3□□□□□ -1.08
SMG5-202ENST00000468993 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
SMG5-202ENST00000468993 NISCHQ9Y2I1 1504 aa8.29□□□□□ -1.08
SMG5-202ENST00000468993 PCDHB8Q9UN66 801 aa8.28□□□□□ -1.08
SMG5-202ENST00000468993 PCDHB13Q9Y5F0 798 aa8.28□□□□□ -1.08
SMG5-202ENST00000468993 ZNF579Q8NAF0 562 aaKnown RBP8.26□□□□□ -1.09
SMG5-202ENST00000468993 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
SMG5-202ENST00000468993 PHF8Q9UPP1 1060 aa8.26□□□□□ -1.09
SMG5-202ENST00000468993 CLEC11AQ9Y240 323 aa8.26□□□□□ -1.09
SMG5-202ENST00000468993 RAD21O60216 631 aa8.25□□□□□ -1.09
SMG5-202ENST00000468993 EFCAB3Q8N7B9 438 aa8.25□□□□□ -1.09
SMG5-202ENST00000468993 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
SMG5-202ENST00000468993 AMHR2Q16671 573 aa8.24□□□□□ -1.09
SMG5-202ENST00000468993 GPR37O15354 613 aa8.23□□□□□ -1.09
SMG5-202ENST00000468993 PARP9Q8IXQ6 854 aa8.22□□□□□ -1.09
SMG5-202ENST00000468993 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
SMG5-202ENST00000468993 MAP2K5Q13163 448 aa8.21□□□□□ -1.1
SMG5-202ENST00000468993 RGS22Q8NE09 1264 aa8.21□□□□□ -1.1
SMG5-202ENST00000468993 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
SMG5-202ENST00000468993 MCM6Q14566 821 aa8.2□□□□□ -1.1
SMG5-202ENST00000468993 TMCO4Q5TGY1 634 aa8.2□□□□□ -1.1
SMG5-202ENST00000468993 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
SMG5-202ENST00000468993 AKT1S1Q96B36 256 aa8.2□□□□□ -1.1
SMG5-202ENST00000468993 CCDC97Q96F63 343 aaPredicted RBP8.2□□□□□ -1.1
SMG5-202ENST00000468993 TSPYL2Q9H2G4 693 aaPredicted RBP8.2□□□□□ -1.1
SMG5-202ENST00000468993 CABP2Q9NPB3 220 aa8.2□□□□□ -1.1
SMG5-202ENST00000468993 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
SMG5-202ENST00000468993 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
SMG5-202ENST00000468993 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
SMG5-202ENST00000468993 IRF6O14896 467 aa8.17□□□□□ -1.1
SMG5-202ENST00000468993 PDIA6Q15084 440 aa8.17□□□□□ -1.1
SMG5-202ENST00000468993 ZNF777Q9ULD5 760 aaPredicted RBP8.16□□□□□ -1.1
SMG5-202ENST00000468993 LOC105371045A0A1W2PR82 267 aa8.15□□□□□ -1.1
SMG5-202ENST00000468993 MFAP1P55081 439 aaKnown RBP8.14□□□□□ -1.11
SMG5-202ENST00000468993 FNBP4Q8N3X1 1017 aaPredicted RBP8.14□□□□□ -1.11
SMG5-202ENST00000468993 MTMR7Q9Y216 660 aa8.14□□□□□ -1.11
SMG5-202ENST00000468993 DPYSL4O14531 572 aa8.13□□□□□ -1.11
SMG5-202ENST00000468993 PPP1R15BQ5SWA1 713 aa8.13□□□□□ -1.11
SMG5-202ENST00000468993 MS4A4AQ96JQ5 239 aa8.13□□□□□ -1.11
SMG5-202ENST00000468993 CCDC61Q9Y6R9 512 aa8.13□□□□□ -1.11
SMG5-202ENST00000468993 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
SMG5-202ENST00000468993 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
SMG5-202ENST00000468993 SH3D19Q5HYK7 790 aa8.11□□□□□ -1.11
SMG5-202ENST00000468993 RBM42Q9BTD8 480 aaKnown RBP8.11□□□□□ -1.11
SMG5-202ENST00000468993 GNPATO15228 680 aa8.1□□□□□ -1.11
SMG5-202ENST00000468993 IFNL1Q8IU54 200 aa8.1□□□□□ -1.11
SMG5-202ENST00000468993 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
SMG5-202ENST00000468993 SHROOM4Q9ULL8 1493 aa8.09□□□□□ -1.11
SMG5-202ENST00000468993 IGSF3O75054 1194 aa8.09□□□□□ -1.11
SMG5-202ENST00000468993 REM2Q8IYK8 340 aaPredicted RBP8.09□□□□□ -1.11
SMG5-202ENST00000468993 NUTM2FA1L443 756 aa8.08□□□□□ -1.12
SMG5-202ENST00000468993 HIC1Q14526 733 aa8.08□□□□□ -1.12
SMG5-202ENST00000468993 GPHNQ9NQX3 736 aaPredicted RBP8.08□□□□□ -1.12
SMG5-202ENST00000468993 PLSCR2Q9NRY7 297 aa8.08□□□□□ -1.12
SMG5-202ENST00000468993 EMILIN3Q9NT22 766 aa8.08□□□□□ -1.12
SMG5-202ENST00000468993 RBM25P49756 843 aaKnown RBP8.07□□□□□ -1.12
SMG5-202ENST00000468993 PDE4CQ08493 712 aa8.07□□□□□ -1.12
SMG5-202ENST00000468993 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
SMG5-202ENST00000468993 POM121Q96HA1 1249 aa8.07□□□□□ -1.12
SMG5-202ENST00000468993 PATL2C9JE40 543 aaKnown RBP8.06□□□□□ -1.12
SMG5-202ENST00000468993 MS4A1P11836 297 aa8.06□□□□□ -1.12
SMG5-202ENST00000468993 IRF5Q13568 498 aa8.06□□□□□ -1.12
SMG5-202ENST00000468993 PPP1R15AO75807 674 aaPredicted RBP8.05□□□□□ -1.12
SMG5-202ENST00000468993 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
SMG5-202ENST00000468993 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
SMG5-202ENST00000468993 FCHSD2O94868 740 aa8.04□□□□□ -1.12
SMG5-202ENST00000468993 FBXW7Q969H0 707 aa8.04□□□□□ -1.12
SMG5-202ENST00000468993 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
SMG5-202ENST00000468993 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
SMG5-202ENST00000468993 E9PSI1 815 aa8.02□□□□□ -1.13
SMG5-202ENST00000468993 SKIV2LQ15477 1246 aaKnown RBP8.02□□□□□ -1.13
SMG5-202ENST00000468993 COG6Q9Y2V7 657 aa8.01□□□□□ -1.13
SMG5-202ENST00000468993 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
SMG5-202ENST00000468993 GRXCR2A6NFK2 248 aa8□□□□□ -1.13
SMG5-202ENST00000468993 MAP3K13O43283 966 aa8□□□□□ -1.13
SMG5-202ENST00000468993 FECHP22830 423 aa8□□□□□ -1.13
SMG5-202ENST00000468993 ZNF428Q96B54 188 aa8□□□□□ -1.13
SMG5-202ENST00000468993 PITPNM1O00562 1244 aa7.99□□□□□ -1.13
SMG5-202ENST00000468993 KIF12Q96FN5 646 aa7.99□□□□□ -1.13
SMG5-202ENST00000468993 ZNF330Q9Y3S2 320 aaPredicted RBP7.99□□□□□ -1.13
SMG5-202ENST00000468993 HMGB1P09429 215 aaKnown RBP7.98□□□□□ -1.13
SMG5-202ENST00000468993 OSBPP22059 807 aa7.98□□□□□ -1.13
SMG5-202ENST00000468993 GOLGA2Q08379 1002 aa7.98□□□□□ -1.13
SMG5-202ENST00000468993 DSG2Q14126 1118 aa7.98□□□□□ -1.13
SMG5-202ENST00000468993 ACIN1Q9UKV3 1341 aaKnown RBP7.98□□□□□ -1.13
SMG5-202ENST00000468993 CLCN1P35523 988 aa7.97□□□□□ -1.13
SMG5-202ENST00000468993 KCNA1Q09470 495 aa7.97□□□□□ -1.13
SMG5-202ENST00000468993 REPIN1Q9BWE0 567 aaKnown RBP7.97□□□□□ -1.13
SMG5-202ENST00000468993 PAK3O75914 559 aaPredicted RBP7.96□□□□□ -1.14
SMG5-202ENST00000468993 CHADLQ6NUI6 762 aa7.96□□□□□ -1.14
SMG5-202ENST00000468993 BANK1Q8NDB2 785 aa7.96□□□□□ -1.14
SMG5-202ENST00000468993 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
SMG5-202ENST00000468993 AMOTL2Q9Y2J4 779 aa7.96□□□□□ -1.14
SMG5-202ENST00000468993 BRD1O95696 1058 aa7.94□□□□□ -1.14
SMG5-202ENST00000468993 FOXK1P85037 733 aa7.94□□□□□ -1.14
SMG5-202ENST00000468993 GPCPD1Q9NPB8 672 aa7.94□□□□□ -1.14
SMG5-202ENST00000468993 PTGDRQ13258 359 aa7.93□□□□□ -1.14
SMG5-202ENST00000468993 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
SMG5-202ENST00000468993 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms