RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
SNRPD3-205ENST00000468770 AFAP1Q8N556 730 aa11.5□□□□□ -0.57
SNRPD3-205ENST00000468770 POGZQ7Z3K3 1410 aa11.5□□□□□ -0.57
SNRPD3-205ENST00000468770 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
SNRPD3-205ENST00000468770 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
SNRPD3-205ENST00000468770 YEATS2Q9ULM3 1422 aa11.48□□□□□ -0.57
SNRPD3-205ENST00000468770 ZMYM4Q5VZL5 1548 aa11.48□□□□□ -0.57
SNRPD3-205ENST00000468770 ZFYVE16Q7Z3T8 1539 aa11.48□□□□□ -0.57
SNRPD3-205ENST00000468770 ARHGEF40Q8TER5 1519 aa11.48□□□□□ -0.57
SNRPD3-205ENST00000468770 MLECQ14165 292 aa11.47□□□□□ -0.57
SNRPD3-205ENST00000468770 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
SNRPD3-205ENST00000468770 PTPRMP28827 1452 aa11.46□□□□□ -0.57
SNRPD3-205ENST00000468770 ZNF518AQ6AHZ1 1483 aa11.46□□□□□ -0.57
SNRPD3-205ENST00000468770 MTUS2Q5JR59 1369 aa11.46□□□□□ -0.57
SNRPD3-205ENST00000468770 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.58
SNRPD3-205ENST00000468770 ATP10AO60312 1499 aa11.45□□□□□ -0.58
SNRPD3-205ENST00000468770 BCORL1Q5H9F3 1711 aa11.45□□□□□ -0.58
SNRPD3-205ENST00000468770 CDC42BPBQ9Y5S2 1711 aa11.44□□□□□ -0.58
SNRPD3-205ENST00000468770 CFDP1Q9UEE9 299 aaPredicted RBP11.44□□□□□ -0.58
SNRPD3-205ENST00000468770 CCNB3Q8WWL7 1395 aa11.43□□□□□ -0.58
SNRPD3-205ENST00000468770 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
SNRPD3-205ENST00000468770 PREX2Q70Z35 1606 aa11.42□□□□□ -0.58
SNRPD3-205ENST00000468770 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
SNRPD3-205ENST00000468770 GPATCH8Q9UKJ3 1502 aaKnown RBP11.42□□□□□ -0.58
SNRPD3-205ENST00000468770 C9orf84Q5VXU9 1444 aa11.42□□□□□ -0.58
SNRPD3-205ENST00000468770 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
SNRPD3-205ENST00000468770 MADDQ8WXG6 1647 aa11.42□□□□□ -0.58
SNRPD3-205ENST00000468770 HNRNPMP52272 730 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNRPD3-205ENST00000468770 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
SNRPD3-205ENST00000468770 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.58
SNRPD3-205ENST00000468770 KDM5CP41229 1560 aa11.4□□□□□ -0.58
SNRPD3-205ENST00000468770 ABCC1P33527 1531 aa11.4□□□□□ -0.59
SNRPD3-205ENST00000468770 MLH3Q9UHC1 1453 aa11.39□□□□□ -0.59
SNRPD3-205ENST00000468770 SIGLEC1Q9BZZ2 1709 aa11.38□□□□□ -0.59
SNRPD3-205ENST00000468770 RIMS1Q86UR5 1692 aaKnown RBP11.38□□□□□ -0.59
SNRPD3-205ENST00000468770 SPAG9O60271 1321 aaKnown RBP11.37□□□□□ -0.59
SNRPD3-205ENST00000468770 ESF1Q9H501 851 aaKnown RBP11.37□□□□□ -0.59
SNRPD3-205ENST00000468770 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
SNRPD3-205ENST00000468770 ITSN2Q9NZM3 1697 aa11.36□□□□□ -0.59
SNRPD3-205ENST00000468770 KIAA1107Q9UPP5 1409 aa11.36□□□□□ -0.59
SNRPD3-205ENST00000468770 EHBP1L1Q8N3D4 1523 aa11.36□□□□□ -0.59
SNRPD3-205ENST00000468770 SAMD9LQ8IVG5 1584 aa11.36□□□□□ -0.59
SNRPD3-205ENST00000468770 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
SNRPD3-205ENST00000468770 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
SNRPD3-205ENST00000468770 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
SNRPD3-205ENST00000468770 DIP2CQ9Y2E4 1556 aa11.35□□□□□ -0.59
SNRPD3-205ENST00000468770 SYCP2Q9BX26 1530 aa11.35□□□□□ -0.59
SNRPD3-205ENST00000468770 FER1L4A9Z1Z3 1794 aa11.33□□□□□ -0.59
SNRPD3-205ENST00000468770 ABCA6Q8N139 1617 aa11.33□□□□□ -0.6
SNRPD3-205ENST00000468770 REREQ9P2R6 1566 aa11.33□□□□□ -0.6
SNRPD3-205ENST00000468770 KIDINS220Q9ULH0 1771 aa11.32□□□□□ -0.6
SNRPD3-205ENST00000468770 APLP2Q06481 763 aa11.32□□□□□ -0.6
SNRPD3-205ENST00000468770 TIAM1Q13009 1591 aa11.32□□□□□ -0.6
SNRPD3-205ENST00000468770 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
SNRPD3-205ENST00000468770 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
SNRPD3-205ENST00000468770 AGLP35573 1532 aa11.31□□□□□ -0.6
SNRPD3-205ENST00000468770 HSPA2P54652 639 aa11.31□□□□□ -0.6
SNRPD3-205ENST00000468770 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
SNRPD3-205ENST00000468770 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
SNRPD3-205ENST00000468770 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
SNRPD3-205ENST00000468770 LRRC9Q6ZRR7 1453 aa11.3□□□□□ -0.6
SNRPD3-205ENST00000468770 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
SNRPD3-205ENST00000468770 ATP7AQ04656 1500 aa11.29□□□□□ -0.6
SNRPD3-205ENST00000468770 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
SNRPD3-205ENST00000468770 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
SNRPD3-205ENST00000468770 GGT6Q6P531 493 aa11.28□□□□□ -0.6
SNRPD3-205ENST00000468770 A2MP01023 1474 aa11.27□□□□□ -0.6
SNRPD3-205ENST00000468770 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.61
SNRPD3-205ENST00000468770 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
SNRPD3-205ENST00000468770 CNTLNQ9NXG0 1405 aa11.26□□□□□ -0.61
SNRPD3-205ENST00000468770 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
SNRPD3-205ENST00000468770 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
SNRPD3-205ENST00000468770 INO80Q9ULG1 1556 aaPredicted RBP11.25□□□□□ -0.61
SNRPD3-205ENST00000468770 PPP6R1Q9UPN7 881 aa11.25□□□□□ -0.61
SNRPD3-205ENST00000468770 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
SNRPD3-205ENST00000468770 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
SNRPD3-205ENST00000468770 SETD1BQ9UPS6 1966 aaKnown RBP11.25□□□□□ -0.61
SNRPD3-205ENST00000468770 DHX29Q7Z478 1369 aaKnown RBP11.24□□□□□ -0.61
SNRPD3-205ENST00000468770 UHRF1BP1Q6BDS2 1440 aa11.24□□□□□ -0.61
SNRPD3-205ENST00000468770 KIF3BO15066 747 aa11.23□□□□□ -0.61
SNRPD3-205ENST00000468770 PLXNC1O60486 1568 aa11.22□□□□□ -0.61
SNRPD3-205ENST00000468770 ADGBQ8N7X0 1667 aa11.22□□□□□ -0.61
SNRPD3-205ENST00000468770 PREX1Q8TCU6 1659 aa11.22□□□□□ -0.61
SNRPD3-205ENST00000468770 C3P01024 1663 aa11.21□□□□□ -0.61
SNRPD3-205ENST00000468770 MYOM3Q5VTT5 1437 aa11.21□□□□□ -0.61
SNRPD3-205ENST00000468770 MIA2Q96PC5 1412 aa11.21□□□□□ -0.61
SNRPD3-205ENST00000468770 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
SNRPD3-205ENST00000468770 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
SNRPD3-205ENST00000468770 NPATQ14207 1427 aa11.18□□□□□ -0.62
SNRPD3-205ENST00000468770 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
SNRPD3-205ENST00000468770 MROH2AA6NES4 1674 aa11.17□□□□□ -0.62
SNRPD3-205ENST00000468770 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
SNRPD3-205ENST00000468770 FBXO41Q8TF61 875 aa11.17□□□□□ -0.62
SNRPD3-205ENST00000468770 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
SNRPD3-205ENST00000468770 FBXO31Q5XUX0 539 aaPredicted RBP11.14□□□□□ -0.63
SNRPD3-205ENST00000468770 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
SNRPD3-205ENST00000468770 RRP7BPQ9NSQ0 103 aa11.13□□□□□ -0.63
SNRPD3-205ENST00000468770 MAST1Q9Y2H9 1570 aa11.12□□□□□ -0.63
SNRPD3-205ENST00000468770 FGD6Q6ZV73 1430 aa11.12□□□□□ -0.63
SNRPD3-205ENST00000468770 STRCQ7RTU9 1775 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms