RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 NEO1Q92859 1461 aa17.49■□□□□ 0.39
MSH5-214ENST00000468602 PPRC1Q5VV67 1664 aaKnown RBP17.48■□□□□ 0.39
MSH5-214ENST00000468602 CDC42BPBQ9Y5S2 1711 aa17.48■□□□□ 0.39
MSH5-214ENST00000468602 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
MSH5-214ENST00000468602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.39
MSH5-214ENST00000468602 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
MSH5-214ENST00000468602 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
MSH5-214ENST00000468602 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
MSH5-214ENST00000468602 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
MSH5-214ENST00000468602 FGD6Q6ZV73 1430 aa17.43■□□□□ 0.38
MSH5-214ENST00000468602 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
MSH5-214ENST00000468602 FANCAO15360 1455 aa17.42■□□□□ 0.38
MSH5-214ENST00000468602 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
MSH5-214ENST00000468602 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
MSH5-214ENST00000468602 ARHGAP5Q13017 1502 aa17.39■□□□□ 0.37
MSH5-214ENST00000468602 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
MSH5-214ENST00000468602 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
MSH5-214ENST00000468602 RSPH4AQ5TD94 716 aa17.37■□□□□ 0.37
MSH5-214ENST00000468602 ABCC1P33527 1531 aa17.37■□□□□ 0.37
MSH5-214ENST00000468602 MBD5Q9P267 1494 aa17.36■□□□□ 0.37
MSH5-214ENST00000468602 ARHGEF5Q12774 1597 aa17.36■□□□□ 0.37
MSH5-214ENST00000468602 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
MSH5-214ENST00000468602 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
MSH5-214ENST00000468602 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
MSH5-214ENST00000468602 ADGRL1O94910 1474 aa17.32■□□□□ 0.36
MSH5-214ENST00000468602 ARHGEF12Q9NZN5 1544 aa17.31■□□□□ 0.36
MSH5-214ENST00000468602 KDM5CP41229 1560 aa17.3■□□□□ 0.36
MSH5-214ENST00000468602 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
MSH5-214ENST00000468602 DENND4BO75064 1496 aaPredicted RBP17.29■□□□□ 0.36
MSH5-214ENST00000468602 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
MSH5-214ENST00000468602 POGZQ7Z3K3 1410 aa17.29■□□□□ 0.36
MSH5-214ENST00000468602 RICTORQ6R327 1708 aa17.28■□□□□ 0.36
MSH5-214ENST00000468602 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
MSH5-214ENST00000468602 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
MSH5-214ENST00000468602 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
MSH5-214ENST00000468602 ZMYM4Q5VZL5 1548 aa17.27■□□□□ 0.36
MSH5-214ENST00000468602 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
MSH5-214ENST00000468602 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.36
MSH5-214ENST00000468602 COL17A1Q9UMD9 1497 aaPredicted RBP17.27■□□□□ 0.36
MSH5-214ENST00000468602 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
MSH5-214ENST00000468602 MAST1Q9Y2H9 1570 aa17.27■□□□□ 0.35
MSH5-214ENST00000468602 CCDC141Q6ZP82 1450 aa17.26■□□□□ 0.35
MSH5-214ENST00000468602 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
MSH5-214ENST00000468602 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
MSH5-214ENST00000468602 FRMPD1Q5SYB0 1578 aa17.25■□□□□ 0.35
MSH5-214ENST00000468602 ABCC5O15440 1437 aa17.24■□□□□ 0.35
MSH5-214ENST00000468602 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
MSH5-214ENST00000468602 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
MSH5-214ENST00000468602 DAPK1P53355 1430 aa17.23■□□□□ 0.35
MSH5-214ENST00000468602 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
MSH5-214ENST00000468602 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
MSH5-214ENST00000468602 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
MSH5-214ENST00000468602 HNRNPMP52272 730 aaKnown RBP eCLIP17.21■□□□□ 0.35
MSH5-214ENST00000468602 KDM6BO15054 1643 aa17.21■□□□□ 0.35
MSH5-214ENST00000468602 INO80Q9ULG1 1556 aaPredicted RBP17.2■□□□□ 0.34
MSH5-214ENST00000468602 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
MSH5-214ENST00000468602 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
MSH5-214ENST00000468602 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
MSH5-214ENST00000468602 PLXNC1O60486 1568 aa17.17■□□□□ 0.34
MSH5-214ENST00000468602 PTPRKQ15262 1439 aa17.17■□□□□ 0.34
MSH5-214ENST00000468602 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
MSH5-214ENST00000468602 C9orf84Q5VXU9 1444 aa17.16■□□□□ 0.34
MSH5-214ENST00000468602 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
MSH5-214ENST00000468602 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
MSH5-214ENST00000468602 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
MSH5-214ENST00000468602 REREQ9P2R6 1566 aa17.15■□□□□ 0.34
MSH5-214ENST00000468602 RAPGEF3O95398 923 aa17.15■□□□□ 0.34
MSH5-214ENST00000468602 FAM50AQ14320 339 aaKnown RBP17.15■□□□□ 0.34
MSH5-214ENST00000468602 ATP7AQ04656 1500 aa17.15■□□□□ 0.34
MSH5-214ENST00000468602 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
MSH5-214ENST00000468602 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
MSH5-214ENST00000468602 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
MSH5-214ENST00000468602 ADGBQ8N7X0 1667 aa17.12■□□□□ 0.33
MSH5-214ENST00000468602 ANKRD30AQ9BXX3 1397 aa17.11■□□□□ 0.33
MSH5-214ENST00000468602 ARHGEF40Q8TER5 1519 aa17.11■□□□□ 0.33
MSH5-214ENST00000468602 HFM1A2PYH4 1435 aa17.09■□□□□ 0.33
MSH5-214ENST00000468602 DIP2CQ9Y2E4 1556 aa17.09■□□□□ 0.33
MSH5-214ENST00000468602 BCORL1Q5H9F3 1711 aa17.09■□□□□ 0.33
MSH5-214ENST00000468602 ATP10AO60312 1499 aa17.08■□□□□ 0.32
MSH5-214ENST00000468602 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
MSH5-214ENST00000468602 AGLP35573 1532 aa17.07■□□□□ 0.32
MSH5-214ENST00000468602 DUOX2Q9NRD8 1548 aa17.07■□□□□ 0.32
MSH5-214ENST00000468602 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
MSH5-214ENST00000468602 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
MSH5-214ENST00000468602 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
MSH5-214ENST00000468602 ERBINQ96RT1 1412 aa17.05■□□□□ 0.32
MSH5-214ENST00000468602 KIF15Q9NS87 1388 aa17.04■□□□□ 0.32
MSH5-214ENST00000468602 EIF2AK4Q9P2K8 1649 aaKnown RBP17.04■□□□□ 0.32
MSH5-214ENST00000468602 HRCP23327 699 aa17.04■□□□□ 0.32
MSH5-214ENST00000468602 FBXO41Q8TF61 875 aa17.04■□□□□ 0.32
MSH5-214ENST00000468602 A2MP01023 1474 aa17.04■□□□□ 0.32
MSH5-214ENST00000468602 NAIPQ13075 1403 aa17.04■□□□□ 0.32
MSH5-214ENST00000468602 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
MSH5-214ENST00000468602 ANKRD50Q9ULJ7 1429 aa17■□□□□ 0.31
MSH5-214ENST00000468602 FAM135AQ9P2D6 1515 aa16.99■□□□□ 0.31
MSH5-214ENST00000468602 CHIC2Q9UKJ5 165 aa16.98■□□□□ 0.31
MSH5-214ENST00000468602 RNF17Q9BXT8 1623 aaKnown RBP16.97■□□□□ 0.31
MSH5-214ENST00000468602 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
MSH5-214ENST00000468602 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.31
MSH5-214ENST00000468602 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms