RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
SSB-208ENST00000468600 KHSRPQ92945 711 aaKnown RBP eCLIP12.37□□□□□ -0.43
SSB-208ENST00000468600 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
SSB-208ENST00000468600 SOX12O15370 315 aa12.3□□□□□ -0.44
SSB-208ENST00000468600 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
SSB-208ENST00000468600 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
SSB-208ENST00000468600 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
SSB-208ENST00000468600 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
SSB-208ENST00000468600 PBX2P40425 430 aa12.23□□□□□ -0.45
SSB-208ENST00000468600 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
SSB-208ENST00000468600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
SSB-208ENST00000468600 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
SSB-208ENST00000468600 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
SSB-208ENST00000468600 NUDT7P0C024 238 aa12.19□□□□□ -0.46
SSB-208ENST00000468600 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
SSB-208ENST00000468600 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
SSB-208ENST00000468600 KIF3CO14782 793 aa12.16□□□□□ -0.46
SSB-208ENST00000468600 FBXO22Q8NEZ5 403 aa12.16□□□□□ -0.46
SSB-208ENST00000468600 LHX6Q9UPM6 363 aa12.15□□□□□ -0.46
SSB-208ENST00000468600 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
SSB-208ENST00000468600 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
SSB-208ENST00000468600 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
SSB-208ENST00000468600 NLRP6P59044 892 aa12.09□□□□□ -0.47
SSB-208ENST00000468600 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
SSB-208ENST00000468600 SLC34A2O95436 690 aa12.07□□□□□ -0.48
SSB-208ENST00000468600 ARHGAP33O14559 1287 aa12.03□□□□□ -0.48
SSB-208ENST00000468600 MFRPQ9BY79 579 aa12.03□□□□□ -0.48
SSB-208ENST00000468600 HRO43593 1189 aa12.02□□□□□ -0.49
SSB-208ENST00000468600 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
SSB-208ENST00000468600 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
SSB-208ENST00000468600 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
SSB-208ENST00000468600 TK2O00142 265 aa11.98□□□□□ -0.49
SSB-208ENST00000468600 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
SSB-208ENST00000468600 PSEN2P49810 448 aa11.94□□□□□ -0.5
SSB-208ENST00000468600 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
SSB-208ENST00000468600 KCTD12Q96CX2 325 aaKnown RBP11.93□□□□□ -0.5
SSB-208ENST00000468600 STK24Q9Y6E0 443 aa11.91□□□□□ -0.5
SSB-208ENST00000468600 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
SSB-208ENST00000468600 PTCD2Q8WV60 388 aaKnown RBP11.84□□□□□ -0.51
SSB-208ENST00000468600 STK25O00506 426 aa11.83□□□□□ -0.52
SSB-208ENST00000468600 RGS20O76081 388 aa11.83□□□□□ -0.52
SSB-208ENST00000468600 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
SSB-208ENST00000468600 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
SSB-208ENST00000468600 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
SSB-208ENST00000468600 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
SSB-208ENST00000468600 PPP1R37O75864 691 aa11.78□□□□□ -0.52
SSB-208ENST00000468600 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
SSB-208ENST00000468600 PTPN5P54829 565 aa11.77□□□□□ -0.53
SSB-208ENST00000468600 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
SSB-208ENST00000468600 A0A0G2JS52 829 aa11.76□□□□□ -0.53
SSB-208ENST00000468600 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
SSB-208ENST00000468600 FOXK1P85037 733 aa11.71□□□□□ -0.53
SSB-208ENST00000468600 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.53
SSB-208ENST00000468600 PLPP6Q8IY26 295 aa11.7□□□□□ -0.54
SSB-208ENST00000468600 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
SSB-208ENST00000468600 RGL2O15211 777 aa11.66□□□□□ -0.54
SSB-208ENST00000468600 KCNH8Q96L42 1107 aa11.66□□□□□ -0.54
SSB-208ENST00000468600 SLC4A5Q9BY07 1137 aa11.66□□□□□ -0.54
SSB-208ENST00000468600 DSG2Q14126 1118 aa11.65□□□□□ -0.54
SSB-208ENST00000468600 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
SSB-208ENST00000468600 PKD2Q13563 968 aa11.63□□□□□ -0.55
SSB-208ENST00000468600 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
SSB-208ENST00000468600 TBC1D12O60347 775 aa11.61□□□□□ -0.55
SSB-208ENST00000468600 ZNF454Q8N9F8 522 aa11.59□□□□□ -0.55
SSB-208ENST00000468600 WNT2BQ93097 391 aa11.59□□□□□ -0.55
SSB-208ENST00000468600 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
SSB-208ENST00000468600 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
SSB-208ENST00000468600 FOSBP53539 338 aa11.54□□□□□ -0.56
SSB-208ENST00000468600 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
SSB-208ENST00000468600 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
SSB-208ENST00000468600 Q6ZNB5 142 aa11.52□□□□□ -0.57
SSB-208ENST00000468600 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
SSB-208ENST00000468600 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
SSB-208ENST00000468600 PTPREP23469 700 aa11.51□□□□□ -0.57
SSB-208ENST00000468600 LCE2BO14633 110 aa11.47□□□□□ -0.57
SSB-208ENST00000468600 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
SSB-208ENST00000468600 NBPF3Q9H094 633 aa11.46□□□□□ -0.57
SSB-208ENST00000468600 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
SSB-208ENST00000468600 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
SSB-208ENST00000468600 ANO8Q9HCE9 1232 aaPredicted RBP11.42□□□□□ -0.58
SSB-208ENST00000468600 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.58
SSB-208ENST00000468600 BCAMP50895 628 aa11.39□□□□□ -0.59
SSB-208ENST00000468600 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
SSB-208ENST00000468600 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
SSB-208ENST00000468600 ANKK1Q8NFD2 765 aa11.38□□□□□ -0.59
SSB-208ENST00000468600 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
SSB-208ENST00000468600 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
SSB-208ENST00000468600 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
SSB-208ENST00000468600 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
SSB-208ENST00000468600 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
SSB-208ENST00000468600 EVI5O60447 810 aa11.34□□□□□ -0.59
SSB-208ENST00000468600 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
SSB-208ENST00000468600 COL9A1P20849 921 aa11.31□□□□□ -0.6
SSB-208ENST00000468600 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
SSB-208ENST00000468600 KCNC4Q03721 635 aa11.3□□□□□ -0.6
SSB-208ENST00000468600 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
SSB-208ENST00000468600 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
SSB-208ENST00000468600 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
SSB-208ENST00000468600 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
SSB-208ENST00000468600 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms