RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P25-201ENST00000468402 ZFP91Q96JP5 570 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P25-201ENST00000468402 WDR70Q9NW82 654 aa7.37□□□□□ -1.23
HMGB1P25-201ENST00000468402 IRX5P78411 483 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P25-201ENST00000468402 SPNS2Q8IVW8 549 aa7.36□□□□□ -1.23
HMGB1P25-201ENST00000468402 L3MBTL3Q96JM7 780 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P25-201ENST00000468402 FAM205CA6NFA0 338 aa7.34□□□□□ -1.23
HMGB1P25-201ENST00000468402 CHRM1P11229 460 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P25-201ENST00000468402 ERICH6Q7L0X2 663 aa7.34□□□□□ -1.23
HMGB1P25-201ENST00000468402 P3H3Q8IVL6 736 aa7.34□□□□□ -1.23
HMGB1P25-201ENST00000468402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGB1P25-201ENST00000468402 ZNF467Q7Z7K2 595 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P25-201ENST00000468402 ZNF710Q8N1W2 664 aa7.32□□□□□ -1.24
HMGB1P25-201ENST00000468402 TMEM132AQ24JP5 1023 aa7.3□□□□□ -1.24
HMGB1P25-201ENST00000468402 HS3ST6Q96QI5 342 aa7.28□□□□□ -1.24
HMGB1P25-201ENST00000468402 LMOD2Q6P5Q4 547 aa7.26□□□□□ -1.25
HMGB1P25-201ENST00000468402 C14orf37Q86TY3 774 aa7.26□□□□□ -1.25
HMGB1P25-201ENST00000468402 PSEN1P49768 467 aa7.25□□□□□ -1.25
HMGB1P25-201ENST00000468402 ERBB3P21860 1342 aa7.24□□□□□ -1.25
HMGB1P25-201ENST00000468402 KCNV2Q8TDN2 545 aa7.23□□□□□ -1.25
HMGB1P25-201ENST00000468402 CABP2Q9NPB3 220 aa7.23□□□□□ -1.25
HMGB1P25-201ENST00000468402 RIMBP2O15034 1052 aa7.22□□□□□ -1.25
HMGB1P25-201ENST00000468402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGB1P25-201ENST00000468402 CADPS2Q86UW7 1296 aa7.22□□□□□ -1.25
HMGB1P25-201ENST00000468402 PDAP1Q13442 181 aaKnown RBP7.2□□□□□ -1.26
HMGB1P25-201ENST00000468402 PDCD7Q8N8D1 485 aaKnown RBP7.2□□□□□ -1.26
HMGB1P25-201ENST00000468402 ARXQ96QS3 562 aa7.2□□□□□ -1.26
HMGB1P25-201ENST00000468402 BOLA1Q9Y3E2 137 aa7.19□□□□□ -1.26
HMGB1P25-201ENST00000468402 DOK7Q18PE1 504 aa7.18□□□□□ -1.26
HMGB1P25-201ENST00000468402 RNF166Q96A37 237 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P25-201ENST00000468402 NEUROD2Q15784 382 aa7.15□□□□□ -1.26
HMGB1P25-201ENST00000468402 DPY19L2Q6NUT2 758 aa7.14□□□□□ -1.27
HMGB1P25-201ENST00000468402 ARHGEF1Q92888 912 aaKnown RBP7.14□□□□□ -1.27
HMGB1P25-201ENST00000468402 BRPF1P55201 1214 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P25-201ENST00000468402 E2F4Q16254 413 aa7.13□□□□□ -1.27
HMGB1P25-201ENST00000468402 VARS2Q5ST30 1063 aaKnown RBP7.13□□□□□ -1.27
HMGB1P25-201ENST00000468402 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
HMGB1P25-201ENST00000468402 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
HMGB1P25-201ENST00000468402 MFRPQ9BY79 579 aa7.12□□□□□ -1.27
HMGB1P25-201ENST00000468402 HOMEZQ8IX15 550 aa7.11□□□□□ -1.27
HMGB1P25-201ENST00000468402 ZC3H15Q8WU90 426 aaKnown RBP7.11□□□□□ -1.27
HMGB1P25-201ENST00000468402 MYT1LQ9UL68 1186 aa7.11□□□□□ -1.27
HMGB1P25-201ENST00000468402 POTEB3A0JP26 581 aa7.1□□□□□ -1.27
HMGB1P25-201ENST00000468402 SEMA3EO15041 775 aa7.1□□□□□ -1.27
HMGB1P25-201ENST00000468402 NLRP6P59044 892 aa7.1□□□□□ -1.27
HMGB1P25-201ENST00000468402 POTEBQ6S5H4 581 aa7.1□□□□□ -1.27
HMGB1P25-201ENST00000468402 SLC24A3Q9HC58 644 aa7.1□□□□□ -1.27
HMGB1P25-201ENST00000468402 PPP1R37O75864 691 aa7.09□□□□□ -1.27
HMGB1P25-201ENST00000468402 SMYD5Q6GMV2 418 aa7.09□□□□□ -1.27
HMGB1P25-201ENST00000468402 ANKRD13DQ6ZTN6 518 aa7.09□□□□□ -1.27
HMGB1P25-201ENST00000468402 HOXB1P14653 301 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P25-201ENST00000468402 EFCAB3Q8N7B9 438 aa7.08□□□□□ -1.28
HMGB1P25-201ENST00000468402 LARP6Q9BRS8 491 aaKnown RBP7.06□□□□□ -1.28
HMGB1P25-201ENST00000468402 PHF8Q9UPP1 1060 aa7.06□□□□□ -1.28
HMGB1P25-201ENST00000468402 TESPA1A2RU30 521 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P25-201ENST00000468402 SUPT5HO00267 1087 aaKnown RBP7.05□□□□□ -1.28
HMGB1P25-201ENST00000468402 SOX12O15370 315 aa7.05□□□□□ -1.28
HMGB1P25-201ENST00000468402 DAXXQ9UER7 740 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P25-201ENST00000468402 PDE4AP27815 886 aa7.04□□□□□ -1.28
HMGB1P25-201ENST00000468402 HOXB3P14651 431 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P25-201ENST00000468402 KRI1Q8N9T8 703 aaKnown RBP7.02□□□□□ -1.29
HMGB1P25-201ENST00000468402 FBXO22Q8NEZ5 403 aa7.01□□□□□ -1.29
HMGB1P25-201ENST00000468402 PTGER2P43116 358 aa7□□□□□ -1.29
HMGB1P25-201ENST00000468402 ZMYND10O75800 440 aa6.99□□□□□ -1.29
HMGB1P25-201ENST00000468402 DDX27Q96GQ7 796 aaKnown RBP6.99□□□□□ -1.29
HMGB1P25-201ENST00000468402 MICALL2Q8IY33 904 aa6.98□□□□□ -1.29
HMGB1P25-201ENST00000468402 ZNF687Q8N1G0 1237 aa6.98□□□□□ -1.29
HMGB1P25-201ENST00000468402 ZSWIM6Q9HCJ5 1215 aa6.98□□□□□ -1.29
HMGB1P25-201ENST00000468402 NCKAP5LQ9HCH0 1330 aa6.98□□□□□ -1.29
HMGB1P25-201ENST00000468402 ARSIQ5FYB1 569 aa6.97□□□□□ -1.29
HMGB1P25-201ENST00000468402 BARGINQ6ZT62 677 aa6.95□□□□□ -1.3
HMGB1P25-201ENST00000468402 IL27Q8NEV9 243 aa6.95□□□□□ -1.3
HMGB1P25-201ENST00000468402 AK7Q96M32 723 aa6.95□□□□□ -1.3
HMGB1P25-201ENST00000468402 STAC3Q96MF2 364 aa6.95□□□□□ -1.3
HMGB1P25-201ENST00000468402 RBM26Q5T8P6 1007 aaKnown RBP6.94□□□□□ -1.3
HMGB1P25-201ENST00000468402 GPIHBP1Q8IV16 184 aa6.94□□□□□ -1.3
HMGB1P25-201ENST00000468402 ILDR1Q86SU0 546 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P25-201ENST00000468402 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P25-201ENST00000468402 MFSD10Q14728 455 aa6.92□□□□□ -1.3
HMGB1P25-201ENST00000468402 ZNF316A6NFI3 1004 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P25-201ENST00000468402 CRISPLD2Q9H0B8 497 aa6.91□□□□□ -1.3
HMGB1P25-201ENST00000468402 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
HMGB1P25-201ENST00000468402 MLLT3P42568 568 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P25-201ENST00000468402 LSM11P83369 360 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P25-201ENST00000468402 KHSRPQ92945 711 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P25-201ENST00000468402 MS4A4AQ96JQ5 239 aa6.9□□□□□ -1.3
HMGB1P25-201ENST00000468402 GPR153Q6NV75 609 aa6.89□□□□□ -1.31
HMGB1P25-201ENST00000468402 ARIH1Q9Y4X5 557 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P25-201ENST00000468402 NUDT7P0C024 238 aa6.88□□□□□ -1.31
HMGB1P25-201ENST00000468402 KDM4CQ9H3R0 1056 aa6.88□□□□□ -1.31
HMGB1P25-201ENST00000468402 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
HMGB1P25-201ENST00000468402 PPP1R15BQ5SWA1 713 aa6.87□□□□□ -1.31
HMGB1P25-201ENST00000468402 TMEM92Q6UXU6 159 aa6.87□□□□□ -1.31
HMGB1P25-201ENST00000468402 AXIN2Q9Y2T1 843 aa6.87□□□□□ -1.31
HMGB1P25-201ENST00000468402 ZMYND15Q9H091 742 aa6.86□□□□□ -1.31
HMGB1P25-201ENST00000468402 HCSTQ9UBK5 93 aa6.86□□□□□ -1.31
HMGB1P25-201ENST00000468402 DPYSL4O14531 572 aa6.85□□□□□ -1.31
HMGB1P25-201ENST00000468402 TRIM66O15016 1216 aa6.85□□□□□ -1.31
HMGB1P25-201ENST00000468402 PDE4DQ08499 809 aa6.85□□□□□ -1.31
HMGB1P25-201ENST00000468402 TMC2Q8TDI7 906 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms