RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 CDC42BPBQ9Y5S2 1711 aa26.03■■□□□ 1.76
CDK11A-212ENST00000468397 EFCAB2Q5VUJ9 269 aa26.03■■□□□ 1.76
CDK11A-212ENST00000468397 LRRC9Q6ZRR7 1453 aa26.03■■□□□ 1.76
CDK11A-212ENST00000468397 CCNB3Q8WWL7 1395 aa25.99■■□□□ 1.75
CDK11A-212ENST00000468397 ADGRL1O94910 1474 aa25.98■■□□□ 1.75
CDK11A-212ENST00000468397 ITSN2Q9NZM3 1697 aa25.97■■□□□ 1.75
CDK11A-212ENST00000468397 GPATCH8Q9UKJ3 1502 aaKnown RBP25.97■■□□□ 1.75
CDK11A-212ENST00000468397 DENND4BO75064 1496 aaPredicted RBP25.97■■□□□ 1.75
CDK11A-212ENST00000468397 NCOA2Q15596 1464 aa25.96■■□□□ 1.75
CDK11A-212ENST00000468397 FRMPD1Q5SYB0 1578 aa25.93■■□□□ 1.74
CDK11A-212ENST00000468397 RICTORQ6R327 1708 aa25.93■■□□□ 1.74
CDK11A-212ENST00000468397 SCAPERQ9BY12 1400 aa25.92■■□□□ 1.74
CDK11A-212ENST00000468397 KANK4Q5T7N3 995 aaPredicted RBP25.92■■□□□ 1.74
CDK11A-212ENST00000468397 RAPGEF3O95398 923 aa25.91■■□□□ 1.74
CDK11A-212ENST00000468397 CFDP1Q9UEE9 299 aaPredicted RBP25.9■■□□□ 1.74
CDK11A-212ENST00000468397 ABCC1P33527 1531 aa25.89■■□□□ 1.74
CDK11A-212ENST00000468397 POGZQ7Z3K3 1410 aa25.88■■□□□ 1.73
CDK11A-212ENST00000468397 SAMD9LQ8IVG5 1584 aa25.86■■□□□ 1.73
CDK11A-212ENST00000468397 ZMYM4Q5VZL5 1548 aa25.85■■□□□ 1.73
CDK11A-212ENST00000468397 ZNF777Q9ULD5 760 aaPredicted RBP25.85■■□□□ 1.73
CDK11A-212ENST00000468397 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
CDK11A-212ENST00000468397 ZNF518AQ6AHZ1 1483 aa25.84■■□□□ 1.73
CDK11A-212ENST00000468397 SYCP2Q9BX26 1530 aa25.8■■□□□ 1.72
CDK11A-212ENST00000468397 KIAA1107Q9UPP5 1409 aa25.79■■□□□ 1.72
CDK11A-212ENST00000468397 MAGI2Q86UL8 1455 aa25.79■■□□□ 1.72
CDK11A-212ENST00000468397 ARHGEF40Q8TER5 1519 aa25.78■■□□□ 1.72
CDK11A-212ENST00000468397 ARHGEF12Q9NZN5 1544 aa25.78■■□□□ 1.72
CDK11A-212ENST00000468397 KDM5CP41229 1560 aa25.78■■□□□ 1.72
CDK11A-212ENST00000468397 MYOM3Q5VTT5 1437 aa25.77■■□□□ 1.72
CDK11A-212ENST00000468397 ZFYVE16Q7Z3T8 1539 aa25.77■■□□□ 1.72
CDK11A-212ENST00000468397 TRAPPC8Q9Y2L5 1435 aa25.75■■□□□ 1.71
CDK11A-212ENST00000468397 HECW2Q9P2P5 1572 aa25.73■■□□□ 1.71
CDK11A-212ENST00000468397 CAMSAP2Q08AD1 1489 aa25.73■■□□□ 1.71
CDK11A-212ENST00000468397 MIA2Q96PC5 1412 aa25.73■■□□□ 1.71
CDK11A-212ENST00000468397 AFAP1Q8N556 730 aa25.73■■□□□ 1.71
CDK11A-212ENST00000468397 ZNF644Q9H582 1327 aaPredicted RBP25.71■■□□□ 1.71
CDK11A-212ENST00000468397 HNRNPMP52272 730 aaKnown RBP eCLIP25.71■■□□□ 1.71
CDK11A-212ENST00000468397 MLH3Q9UHC1 1453 aa25.69■■□□□ 1.7
CDK11A-212ENST00000468397 YEATS2Q9ULM3 1422 aa25.69■■□□□ 1.7
CDK11A-212ENST00000468397 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
CDK11A-212ENST00000468397 MBD5Q9P267 1494 aa25.66■■□□□ 1.7
CDK11A-212ENST00000468397 CCDC141Q6ZP82 1450 aa25.64■■□□□ 1.69
CDK11A-212ENST00000468397 SPAG9O60271 1321 aaKnown RBP25.63■■□□□ 1.69
CDK11A-212ENST00000468397 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
CDK11A-212ENST00000468397 ARHGEF5Q12774 1597 aa25.63■■□□□ 1.69
CDK11A-212ENST00000468397 KIDINS220Q9ULH0 1771 aa25.63■■□□□ 1.69
CDK11A-212ENST00000468397 PTPN23Q9H3S7 1636 aa25.63■■□□□ 1.69
CDK11A-212ENST00000468397 DIP2CQ9Y2E4 1556 aa25.62■■□□□ 1.69
CDK11A-212ENST00000468397 ATP10AO60312 1499 aa25.62■■□□□ 1.69
CDK11A-212ENST00000468397 ABCA6Q8N139 1617 aa25.62■■□□□ 1.69
CDK11A-212ENST00000468397 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
CDK11A-212ENST00000468397 RSPH4AQ5TD94 716 aa25.61■■□□□ 1.69
CDK11A-212ENST00000468397 ATP7AQ04656 1500 aa25.61■■□□□ 1.69
CDK11A-212ENST00000468397 C9orf84Q5VXU9 1444 aa25.61■■□□□ 1.69
CDK11A-212ENST00000468397 AEBP2Q6ZN18 517 aaPredicted RBP25.57■■□□□ 1.68
CDK11A-212ENST00000468397 ARID4BQ4LE39 1312 aaPredicted RBP25.57■■□□□ 1.68
CDK11A-212ENST00000468397 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
CDK11A-212ENST00000468397 TCOF1Q13428 1488 aaKnown RBP25.56■■□□□ 1.68
CDK11A-212ENST00000468397 PPARGC1BQ86YN6 1023 aaKnown RBP25.55■■□□□ 1.68
CDK11A-212ENST00000468397 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
CDK11A-212ENST00000468397 BCORL1Q5H9F3 1711 aa25.52■■□□□ 1.68
CDK11A-212ENST00000468397 SIGLEC1Q9BZZ2 1709 aa25.52■■□□□ 1.68
CDK11A-212ENST00000468397 TSPY4P0CV99 314 aa25.52■■□□□ 1.68
CDK11A-212ENST00000468397 TSPY10P0CW01 314 aa25.52■■□□□ 1.68
CDK11A-212ENST00000468397 KDM4FA0A1W2PPD8 638 aa25.5■■□□□ 1.67
CDK11A-212ENST00000468397 ADGBQ8N7X0 1667 aa25.5■■□□□ 1.67
CDK11A-212ENST00000468397 MAST1Q9Y2H9 1570 aa25.49■■□□□ 1.67
CDK11A-212ENST00000468397 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
CDK11A-212ENST00000468397 DNMT1P26358 1616 aaKnown RBP25.48■■□□□ 1.67
CDK11A-212ENST00000468397 ADAMTSL3P82987 1691 aa25.46■■□□□ 1.67
CDK11A-212ENST00000468397 AGLP35573 1532 aa25.46■■□□□ 1.67
CDK11A-212ENST00000468397 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
CDK11A-212ENST00000468397 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.66
CDK11A-212ENST00000468397 A2MP01023 1474 aa25.45■■□□□ 1.66
CDK11A-212ENST00000468397 DAPK1P53355 1430 aa25.45■■□□□ 1.66
CDK11A-212ENST00000468397 PLXNC1O60486 1568 aa25.44■■□□□ 1.66
CDK11A-212ENST00000468397 ABCC5O15440 1437 aa25.43■■□□□ 1.66
CDK11A-212ENST00000468397 MADDQ8WXG6 1647 aa25.4■■□□□ 1.66
CDK11A-212ENST00000468397 MLECQ14165 292 aa25.39■■□□□ 1.66
CDK11A-212ENST00000468397 FER1L4A9Z1Z3 1794 aa25.38■■□□□ 1.65
CDK11A-212ENST00000468397 DHX29Q7Z478 1369 aaKnown RBP25.37■■□□□ 1.65
CDK11A-212ENST00000468397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.35■■□□□ 1.65
CDK11A-212ENST00000468397 RIMS1Q86UR5 1692 aaKnown RBP25.34■■□□□ 1.65
CDK11A-212ENST00000468397 RRBP1Q9P2E9 1410 aaKnown RBP25.33■■□□□ 1.65
CDK11A-212ENST00000468397 DUOX2Q9NRD8 1548 aa25.31■■□□□ 1.64
CDK11A-212ENST00000468397 ANKRD30AQ9BXX3 1397 aa25.31■■□□□ 1.64
CDK11A-212ENST00000468397 KIF15Q9NS87 1388 aa25.3■■□□□ 1.64
CDK11A-212ENST00000468397 PTPRMP28827 1452 aa25.29■■□□□ 1.64
CDK11A-212ENST00000468397 ADGRL2O95490 1459 aa25.28■■□□□ 1.64
CDK11A-212ENST00000468397 EIF2AK4Q9P2K8 1649 aaKnown RBP25.28■■□□□ 1.64
CDK11A-212ENST00000468397 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
CDK11A-212ENST00000468397 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
CDK11A-212ENST00000468397 RRP7BPQ9NSQ0 103 aa25.25■■□□□ 1.63
CDK11A-212ENST00000468397 NCOA1Q15788 1441 aa25.25■■□□□ 1.63
CDK11A-212ENST00000468397 KIF3BO15066 747 aa25.24■■□□□ 1.63
CDK11A-212ENST00000468397 ERBINQ96RT1 1412 aa25.23■■□□□ 1.63
CDK11A-212ENST00000468397 CNTLNQ9NXG0 1405 aa25.23■■□□□ 1.63
CDK11A-212ENST00000468397 GGT6Q6P531 493 aa25.23■■□□□ 1.63
CDK11A-212ENST00000468397 PTPRKQ15262 1439 aa25.21■■□□□ 1.63
CDK11A-212ENST00000468397 RNF17Q9BXT8 1623 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms