RNA–Protein interactions for RNA: ENST00000468311.1

PFDN2-202, Transcript of prefoldin subunit 2, humanhuman

TSL 2

Gene PFDN2, Length 408 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-202ENST00000468311 ZMYM4Q5VZL5 1548 aa36.8■■■■□ 3.48
PFDN2-202ENST00000468311 POGZQ7Z3K3 1410 aa36.78■■■■□ 3.48
PFDN2-202ENST00000468311 MAGI2Q86UL8 1455 aa36.76■■■■□ 3.48
PFDN2-202ENST00000468311 PREX2Q70Z35 1606 aa36.76■■■■□ 3.48
PFDN2-202ENST00000468311 MTUS2Q5JR59 1369 aa36.75■■■■□ 3.47
PFDN2-202ENST00000468311 VPS8Q8N3P4 1428 aa36.74■■■■□ 3.47
PFDN2-202ENST00000468311 ARHGEF40Q8TER5 1519 aa36.72■■■■□ 3.47
PFDN2-202ENST00000468311 CDC42BPBQ9Y5S2 1711 aa36.71■■■■□ 3.47
PFDN2-202ENST00000468311 EHBP1L1Q8N3D4 1523 aa36.68■■■■□ 3.46
PFDN2-202ENST00000468311 ZNF518AQ6AHZ1 1483 aa36.68■■■■□ 3.46
PFDN2-202ENST00000468311 ZFYVE16Q7Z3T8 1539 aa36.64■■■■□ 3.46
PFDN2-202ENST00000468311 GPATCH8Q9UKJ3 1502 aaKnown RBP36.64■■■■□ 3.46
PFDN2-202ENST00000468311 CDC42BPAQ5VT25 1732 aa36.64■■■■□ 3.46
PFDN2-202ENST00000468311 ABCC1P33527 1531 aa36.6■■■■□ 3.45
PFDN2-202ENST00000468311 KDM5CP41229 1560 aa36.6■■■■□ 3.45
PFDN2-202ENST00000468311 CCNB3Q8WWL7 1395 aa36.59■■■■□ 3.45
PFDN2-202ENST00000468311 YEATS2Q9ULM3 1422 aa36.58■■■■□ 3.45
PFDN2-202ENST00000468311 TIAM1Q13009 1591 aa36.57■■■■□ 3.44
PFDN2-202ENST00000468311 MAP3K1Q13233 1512 aa36.53■■■■□ 3.44
PFDN2-202ENST00000468311 AFAP1Q8N556 730 aa36.52■■■■□ 3.44
PFDN2-202ENST00000468311 CFDP1Q9UEE9 299 aaPredicted RBP36.52■■■■□ 3.44
PFDN2-202ENST00000468311 ARHGEF12Q9NZN5 1544 aa36.51■■■■□ 3.44
PFDN2-202ENST00000468311 PLEKHH2Q8IVE3 1493 aa36.5■■■■□ 3.43
PFDN2-202ENST00000468311 ARID4BQ4LE39 1312 aaPredicted RBP36.5■■■■□ 3.43
PFDN2-202ENST00000468311 KIAA1107Q9UPP5 1409 aa36.49■■■■□ 3.43
PFDN2-202ENST00000468311 ATP10AO60312 1499 aa36.49■■■■□ 3.43
PFDN2-202ENST00000468311 MLH3Q9UHC1 1453 aa36.49■■■■□ 3.43
PFDN2-202ENST00000468311 ITSN2Q9NZM3 1697 aa36.48■■■■□ 3.43
PFDN2-202ENST00000468311 TRAPPC8Q9Y2L5 1435 aa36.48■■■■□ 3.43
PFDN2-202ENST00000468311 SAMD9LQ8IVG5 1584 aa36.48■■■■□ 3.43
PFDN2-202ENST00000468311 HECW2Q9P2P5 1572 aa36.47■■■■□ 3.43
PFDN2-202ENST00000468311 ADAMTSL3P82987 1691 aa36.47■■■■□ 3.43
PFDN2-202ENST00000468311 BCORL1Q5H9F3 1711 aa36.46■■■■□ 3.43
PFDN2-202ENST00000468311 C9orf84Q5VXU9 1444 aa36.45■■■■□ 3.43
PFDN2-202ENST00000468311 LRRC9Q6ZRR7 1453 aa36.44■■■■□ 3.42
PFDN2-202ENST00000468311 ZNF777Q9ULD5 760 aaPredicted RBP36.44■■■■□ 3.42
PFDN2-202ENST00000468311 SUPT6HQ7KZ85 1726 aaKnown RBP36.43■■■■□ 3.42
PFDN2-202ENST00000468311 NCOA2Q15596 1464 aa36.42■■■■□ 3.42
PFDN2-202ENST00000468311 SYCP2Q9BX26 1530 aa36.4■■■■□ 3.42
PFDN2-202ENST00000468311 REREQ9P2R6 1566 aa36.36■■■■□ 3.41
PFDN2-202ENST00000468311 DIP2CQ9Y2E4 1556 aa36.35■■■■□ 3.41
PFDN2-202ENST00000468311 MYT1LQ9UL68 1186 aa36.34■■■■□ 3.41
PFDN2-202ENST00000468311 SIGLEC1Q9BZZ2 1709 aa36.33■■■■□ 3.41
PFDN2-202ENST00000468311 PTPRMP28827 1452 aa36.32■■■■□ 3.41
PFDN2-202ENST00000468311 HNRNPMP52272 730 aaKnown RBP eCLIP36.32■■■■□ 3.4
PFDN2-202ENST00000468311 MADDQ8WXG6 1647 aa36.3■■■■□ 3.4
PFDN2-202ENST00000468311 ABCA6Q8N139 1617 aa36.28■■■■□ 3.4
PFDN2-202ENST00000468311 APLP2Q06481 763 aa36.28■■■■□ 3.4
PFDN2-202ENST00000468311 SPAG9O60271 1321 aaKnown RBP36.28■■■■□ 3.4
PFDN2-202ENST00000468311 KIDINS220Q9ULH0 1771 aa36.27■■■■□ 3.4
PFDN2-202ENST00000468311 KANK4Q5T7N3 995 aaPredicted RBP36.26■■■■□ 3.4
PFDN2-202ENST00000468311 MBD5Q9P267 1494 aa36.25■■■■□ 3.39
PFDN2-202ENST00000468311 ZNF644Q9H582 1327 aaPredicted RBP36.24■■■■□ 3.39
PFDN2-202ENST00000468311 AGLP35573 1532 aa36.24■■■■□ 3.39
PFDN2-202ENST00000468311 ATP7AQ04656 1500 aa36.2■■■■□ 3.39
PFDN2-202ENST00000468311 RSPH4AQ5TD94 716 aa36.2■■■■□ 3.39
PFDN2-202ENST00000468311 INO80Q9ULG1 1556 aaPredicted RBP36.19■■■■□ 3.38
PFDN2-202ENST00000468311 CAMSAP2Q08AD1 1489 aa36.18■■■■□ 3.38
PFDN2-202ENST00000468311 MLECQ14165 292 aa36.16■■■■□ 3.38
PFDN2-202ENST00000468311 RTEL1-TNFRSF6BF6WH68 1400 aa36.16■■■■□ 3.38
PFDN2-202ENST00000468311 RIMS1Q86UR5 1692 aaKnown RBP36.15■■■■□ 3.38
PFDN2-202ENST00000468311 MIA2Q96PC5 1412 aa36.15■■■■□ 3.38
PFDN2-202ENST00000468311 MYOM3Q5VTT5 1437 aa36.13■■■■□ 3.37
PFDN2-202ENST00000468311 CCDC141Q6ZP82 1450 aa36.12■■■■□ 3.37
PFDN2-202ENST00000468311 FER1L4A9Z1Z3 1794 aa36.1■■■■□ 3.37
PFDN2-202ENST00000468311 ARHGEF5Q12774 1597 aa36.08■■■■□ 3.37
PFDN2-202ENST00000468311 PLXNC1O60486 1568 aa36.06■■■■□ 3.36
PFDN2-202ENST00000468311 A2MP01023 1474 aa36.05■■■■□ 3.36
PFDN2-202ENST00000468311 ADGBQ8N7X0 1667 aa36■■■■□ 3.35
PFDN2-202ENST00000468311 TSPY4P0CV99 314 aa35.97■■■■□ 3.35
PFDN2-202ENST00000468311 TSPY10P0CW01 314 aa35.97■■■■□ 3.35
PFDN2-202ENST00000468311 CNTLNQ9NXG0 1405 aa35.96■■■■□ 3.35
PFDN2-202ENST00000468311 ESF1Q9H501 851 aaKnown RBP35.94■■■■□ 3.34
PFDN2-202ENST00000468311 DHX29Q7Z478 1369 aaKnown RBP35.93■■■■□ 3.34
PFDN2-202ENST00000468311 MAST1Q9Y2H9 1570 aa35.89■■■■□ 3.34
PFDN2-202ENST00000468311 PPP6R1Q9UPN7 881 aa35.89■■■■□ 3.34
PFDN2-202ENST00000468311 LMTK3Q96Q04 1460 aa35.88■■■■□ 3.33
PFDN2-202ENST00000468311 FGD6Q6ZV73 1430 aa35.88■■■■□ 3.33
PFDN2-202ENST00000468311 PTPN23Q9H3S7 1636 aa35.84■■■■□ 3.33
PFDN2-202ENST00000468311 TCOF1Q13428 1488 aaKnown RBP35.84■■■■□ 3.33
PFDN2-202ENST00000468311 PLPPR3Q6T4P5 718 aa35.83■■■■□ 3.33
PFDN2-202ENST00000468311 CEBPAP49715 358 aaPredicted RBP35.81■■■■□ 3.32
PFDN2-202ENST00000468311 SHANK2Q9UPX8 1470 aa35.8■■■■□ 3.32
PFDN2-202ENST00000468311 MROH2AA6NES4 1674 aa35.79■■■■□ 3.32
PFDN2-202ENST00000468311 GGT6Q6P531 493 aa35.77■■■■□ 3.32
PFDN2-202ENST00000468311 C3P01024 1663 aa35.76■■■■□ 3.32
PFDN2-202ENST00000468311 FAM135AQ9P2D6 1515 aa35.75■■■■□ 3.31
PFDN2-202ENST00000468311 ZMYM3Q14202 1370 aa35.74■■■■□ 3.31
PFDN2-202ENST00000468311 ABCC5O15440 1437 aa35.74■■■■□ 3.31
PFDN2-202ENST00000468311 PREX1Q8TCU6 1659 aa35.72■■■■□ 3.31
PFDN2-202ENST00000468311 KIF3BO15066 747 aa35.72■■■■□ 3.31
PFDN2-202ENST00000468311 DAPK1P53355 1430 aa35.71■■■■□ 3.31
PFDN2-202ENST00000468311 NPATQ14207 1427 aa35.71■■■■□ 3.31
PFDN2-202ENST00000468311 DNMT1P26358 1616 aaKnown RBP35.7■■■■□ 3.31
PFDN2-202ENST00000468311 UHRF1BP1Q6BDS2 1440 aa35.69■■■■□ 3.3
PFDN2-202ENST00000468311 CROCC2H7BZ55 1655 aa35.68■■■■□ 3.3
PFDN2-202ENST00000468311 SETD1BQ9UPS6 1966 aaKnown RBP35.67■■■■□ 3.3
PFDN2-202ENST00000468311 CLTCQ00610 1675 aaKnown RBP35.65■■■■□ 3.3
PFDN2-202ENST00000468311 DUOX2Q9NRD8 1548 aa35.65■■■■□ 3.3
PFDN2-202ENST00000468311 EIF2AK4Q9P2K8 1649 aaKnown RBP35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms