RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 PTPN23Q9H3S7 1636 aa18.24■□□□□ 0.51
RNF13-208ENST00000467996 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
RNF13-208ENST00000467996 RRBP1Q9P2E9 1410 aaKnown RBP18.23■□□□□ 0.51
RNF13-208ENST00000467996 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
RNF13-208ENST00000467996 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
RNF13-208ENST00000467996 PPRC1Q5VV67 1664 aaKnown RBP18.2■□□□□ 0.5
RNF13-208ENST00000467996 PLCH2O75038 1416 aa18.2■□□□□ 0.5
RNF13-208ENST00000467996 SAMD9LQ8IVG5 1584 aa18.2■□□□□ 0.5
RNF13-208ENST00000467996 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
RNF13-208ENST00000467996 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
RNF13-208ENST00000467996 CFAP74Q9C0B2 1584 aa18.19■□□□□ 0.5
RNF13-208ENST00000467996 CD109Q6YHK3 1445 aa18.18■□□□□ 0.5
RNF13-208ENST00000467996 CAMSAP2Q08AD1 1489 aa18.18■□□□□ 0.5
RNF13-208ENST00000467996 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
RNF13-208ENST00000467996 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
RNF13-208ENST00000467996 FANCAO15360 1455 aa18.14■□□□□ 0.49
RNF13-208ENST00000467996 ABCC1P33527 1531 aa18.13■□□□□ 0.49
RNF13-208ENST00000467996 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
RNF13-208ENST00000467996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.49
RNF13-208ENST00000467996 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
RNF13-208ENST00000467996 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
RNF13-208ENST00000467996 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
RNF13-208ENST00000467996 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
RNF13-208ENST00000467996 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
RNF13-208ENST00000467996 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
RNF13-208ENST00000467996 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
RNF13-208ENST00000467996 ARHGEF5Q12774 1597 aa18.08■□□□□ 0.49
RNF13-208ENST00000467996 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.49
RNF13-208ENST00000467996 NEO1Q92859 1461 aa18.08■□□□□ 0.49
RNF13-208ENST00000467996 EFCAB2Q5VUJ9 269 aa18.08■□□□□ 0.48
RNF13-208ENST00000467996 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
RNF13-208ENST00000467996 ARHGEF12Q9NZN5 1544 aa18.06■□□□□ 0.48
RNF13-208ENST00000467996 ADGRL1O94910 1474 aa18.06■□□□□ 0.48
RNF13-208ENST00000467996 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
RNF13-208ENST00000467996 MBD5Q9P267 1494 aa18.05■□□□□ 0.48
RNF13-208ENST00000467996 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
RNF13-208ENST00000467996 DAPK1P53355 1430 aa18.04■□□□□ 0.48
RNF13-208ENST00000467996 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
RNF13-208ENST00000467996 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
RNF13-208ENST00000467996 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
RNF13-208ENST00000467996 ABCC5O15440 1437 aa18.01■□□□□ 0.47
RNF13-208ENST00000467996 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
RNF13-208ENST00000467996 MAST1Q9Y2H9 1570 aa18■□□□□ 0.47
RNF13-208ENST00000467996 SCAPERQ9BY12 1400 aa17.99■□□□□ 0.47
RNF13-208ENST00000467996 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.478e-7■■■■□ 23.3
RNF13-208ENST00000467996 FRMPD1Q5SYB0 1578 aa17.99■□□□□ 0.47
RNF13-208ENST00000467996 PTPRKQ15262 1439 aa17.98■□□□□ 0.47
RNF13-208ENST00000467996 TRAPPC8Q9Y2L5 1435 aa17.98■□□□□ 0.47
RNF13-208ENST00000467996 POGZQ7Z3K3 1410 aa17.98■□□□□ 0.47
RNF13-208ENST00000467996 KDM5CP41229 1560 aa17.97■□□□□ 0.47
RNF13-208ENST00000467996 ITGAEP38570 1179 aa17.97■□□□□ 0.47
RNF13-208ENST00000467996 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
RNF13-208ENST00000467996 ZNF518AQ6AHZ1 1483 aa17.96■□□□□ 0.47
RNF13-208ENST00000467996 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
RNF13-208ENST00000467996 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
RNF13-208ENST00000467996 GCC2Q8IWJ2 1684 aa17.95■□□□□ 0.46
RNF13-208ENST00000467996 ZFYVE16Q7Z3T8 1539 aa17.94■□□□□ 0.46
RNF13-208ENST00000467996 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
RNF13-208ENST00000467996 PLXNC1O60486 1568 aa17.93■□□□□ 0.46
RNF13-208ENST00000467996 HECW2Q9P2P5 1572 aa17.93■□□□□ 0.46
RNF13-208ENST00000467996 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
RNF13-208ENST00000467996 ADGRL2O95490 1459 aa17.93■□□□□ 0.46
RNF13-208ENST00000467996 ATP7AQ04656 1500 aa17.92■□□□□ 0.46
RNF13-208ENST00000467996 KIDINS220Q9ULH0 1771 aa17.91■□□□□ 0.46
RNF13-208ENST00000467996 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
RNF13-208ENST00000467996 KDM6BO15054 1643 aa17.9■□□□□ 0.46
RNF13-208ENST00000467996 COL17A1Q9UMD9 1497 aaPredicted RBP17.89■□□□□ 0.45
RNF13-208ENST00000467996 AFAP1Q8N556 730 aa17.89■□□□□ 0.45
RNF13-208ENST00000467996 ROCK1Q13464 1354 aa17.89■□□□□ 0.45
RNF13-208ENST00000467996 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
RNF13-208ENST00000467996 ABCA6Q8N139 1617 aa17.87■□□□□ 0.45
RNF13-208ENST00000467996 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
RNF13-208ENST00000467996 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
RNF13-208ENST00000467996 RTEL1-TNFRSF6BF6WH68 1400 aa17.87■□□□□ 0.45
RNF13-208ENST00000467996 MLH3Q9UHC1 1453 aa17.87■□□□□ 0.45
RNF13-208ENST00000467996 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
RNF13-208ENST00000467996 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
RNF13-208ENST00000467996 HFM1A2PYH4 1435 aa17.86■□□□□ 0.45
RNF13-208ENST00000467996 NCOA1Q15788 1441 aa17.85■□□□□ 0.45
RNF13-208ENST00000467996 ANKRD30AQ9BXX3 1397 aa17.85■□□□□ 0.45
RNF13-208ENST00000467996 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.45
RNF13-208ENST00000467996 NAIPQ13075 1403 aa17.83■□□□□ 0.45
RNF13-208ENST00000467996 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
RNF13-208ENST00000467996 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
RNF13-208ENST00000467996 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
RNF13-208ENST00000467996 DUOX2Q9NRD8 1548 aa17.81■□□□□ 0.44
RNF13-208ENST00000467996 MAGI2Q86UL8 1455 aa17.81■□□□□ 0.44
RNF13-208ENST00000467996 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
RNF13-208ENST00000467996 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
RNF13-208ENST00000467996 YEATS2Q9ULM3 1422 aa17.78■□□□□ 0.44
RNF13-208ENST00000467996 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
RNF13-208ENST00000467996 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.44
RNF13-208ENST00000467996 RAB3GAP2Q9H2M9 1393 aa17.76■□□□□ 0.43
RNF13-208ENST00000467996 ERBINQ96RT1 1412 aa17.75■□□□□ 0.43
RNF13-208ENST00000467996 ANKRD50Q9ULJ7 1429 aa17.75■□□□□ 0.43
RNF13-208ENST00000467996 ADRA2BP18089 450 aa17.75■□□□□ 0.43
RNF13-208ENST00000467996 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
RNF13-208ENST00000467996 A2MP01023 1474 aa17.75■□□□□ 0.43
RNF13-208ENST00000467996 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
RNF13-208ENST00000467996 SIGLEC1Q9BZZ2 1709 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms