RNA–Protein interactions for RNA: ENST00000467915.1

SGSM3-206, Transcript of small G protein signaling modulator 3, humanhuman

TSL 3

Gene SGSM3, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-206ENST00000467915 POGZQ7Z3K3 1410 aa25.85■■□□□ 1.73
SGSM3-206ENST00000467915 ZFYVE16Q7Z3T8 1539 aa25.83■■□□□ 1.73
SGSM3-206ENST00000467915 SIGLEC1Q9BZZ2 1709 aa25.83■■□□□ 1.73
SGSM3-206ENST00000467915 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.72
SGSM3-206ENST00000467915 MAGI2Q86UL8 1455 aa25.8■■□□□ 1.72
SGSM3-206ENST00000467915 MLECQ14165 292 aa25.8■■□□□ 1.72
SGSM3-206ENST00000467915 PLPPR3Q6T4P5 718 aa25.78■■□□□ 1.72
SGSM3-206ENST00000467915 CASKIN1Q8WXD9 1431 aa25.78■■□□□ 1.72
SGSM3-206ENST00000467915 MYO5CQ9NQX4 1742 aa25.77■■□□□ 1.72
SGSM3-206ENST00000467915 AFAP1Q8N556 730 aa25.77■■□□□ 1.72
SGSM3-206ENST00000467915 CLIP1P30622 1438 aa25.77■■□□□ 1.72
SGSM3-206ENST00000467915 PCF11O94913 1555 aaKnown RBP25.76■■□□□ 1.71
SGSM3-206ENST00000467915 RIMS1Q86UR5 1692 aaKnown RBP25.76■■□□□ 1.71
SGSM3-206ENST00000467915 ARHGAP5Q13017 1502 aa25.74■■□□□ 1.71
SGSM3-206ENST00000467915 ATP10AO60312 1499 aa25.72■■□□□ 1.71
SGSM3-206ENST00000467915 LMTK3Q96Q04 1460 aa25.72■■□□□ 1.71
SGSM3-206ENST00000467915 CCDC18Q5T9S5 1454 aa25.67■■□□□ 1.7
SGSM3-206ENST00000467915 ZNF518AQ6AHZ1 1483 aa25.67■■□□□ 1.7
SGSM3-206ENST00000467915 C9orf84Q5VXU9 1444 aa25.67■■□□□ 1.7
SGSM3-206ENST00000467915 HSPA2P54652 639 aa25.66■■□□□ 1.7
SGSM3-206ENST00000467915 ARHGEF12Q9NZN5 1544 aa25.65■■□□□ 1.7
SGSM3-206ENST00000467915 CDC42BPBQ9Y5S2 1711 aa25.65■■□□□ 1.7
SGSM3-206ENST00000467915 MYT1LQ9UL68 1186 aa25.64■■□□□ 1.7
SGSM3-206ENST00000467915 KDM5CP41229 1560 aa25.64■■□□□ 1.69
SGSM3-206ENST00000467915 TRAPPC8Q9Y2L5 1435 aa25.63■■□□□ 1.69
SGSM3-206ENST00000467915 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
SGSM3-206ENST00000467915 CEBPAP49715 358 aaPredicted RBP25.6■■□□□ 1.69
SGSM3-206ENST00000467915 PREX2Q70Z35 1606 aa25.59■■□□□ 1.69
SGSM3-206ENST00000467915 ABCC1P33527 1531 aa25.58■■□□□ 1.68
SGSM3-206ENST00000467915 FER1L4A9Z1Z3 1794 aa25.57■■□□□ 1.68
SGSM3-206ENST00000467915 DIP2CQ9Y2E4 1556 aa25.56■■□□□ 1.68
SGSM3-206ENST00000467915 MLH3Q9UHC1 1453 aa25.56■■□□□ 1.68
SGSM3-206ENST00000467915 ZNF777Q9ULD5 760 aaPredicted RBP25.56■■□□□ 1.68
SGSM3-206ENST00000467915 GPATCH8Q9UKJ3 1502 aaKnown RBP25.53■■□□□ 1.68
SGSM3-206ENST00000467915 ABCA6Q8N139 1617 aa25.52■■□□□ 1.68
SGSM3-206ENST00000467915 CDC42BPAQ5VT25 1732 aa25.52■■□□□ 1.68
SGSM3-206ENST00000467915 ITSN2Q9NZM3 1697 aa25.49■■□□□ 1.67
SGSM3-206ENST00000467915 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
SGSM3-206ENST00000467915 FBXO41Q8TF61 875 aa25.48■■□□□ 1.67
SGSM3-206ENST00000467915 SAMD9LQ8IVG5 1584 aa25.47■■□□□ 1.67
SGSM3-206ENST00000467915 REREQ9P2R6 1566 aa25.47■■□□□ 1.67
SGSM3-206ENST00000467915 KIDINS220Q9ULH0 1771 aa25.44■■□□□ 1.66
SGSM3-206ENST00000467915 CFDP1Q9UEE9 299 aaPredicted RBP25.44■■□□□ 1.66
SGSM3-206ENST00000467915 SYCP2Q9BX26 1530 aa25.43■■□□□ 1.66
SGSM3-206ENST00000467915 MTUS2Q5JR59 1369 aa25.43■■□□□ 1.66
SGSM3-206ENST00000467915 AGLP35573 1532 aa25.42■■□□□ 1.66
SGSM3-206ENST00000467915 CCNB3Q8WWL7 1395 aa25.42■■□□□ 1.66
SGSM3-206ENST00000467915 SPAG9O60271 1321 aaKnown RBP25.4■■□□□ 1.66
SGSM3-206ENST00000467915 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
SGSM3-206ENST00000467915 ZNF644Q9H582 1327 aaPredicted RBP25.39■■□□□ 1.66
SGSM3-206ENST00000467915 KIAA1107Q9UPP5 1409 aa25.37■■□□□ 1.65
SGSM3-206ENST00000467915 ESF1Q9H501 851 aaKnown RBP25.35■■□□□ 1.65
SGSM3-206ENST00000467915 PREX1Q8TCU6 1659 aa25.35■■□□□ 1.65
SGSM3-206ENST00000467915 UHRF1BP1Q6BDS2 1440 aa25.33■■□□□ 1.65
SGSM3-206ENST00000467915 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
SGSM3-206ENST00000467915 C3P01024 1663 aa25.32■■□□□ 1.64
SGSM3-206ENST00000467915 PLEKHH2Q8IVE3 1493 aa25.31■■□□□ 1.64
SGSM3-206ENST00000467915 ATP7AQ04656 1500 aa25.3■■□□□ 1.64
SGSM3-206ENST00000467915 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
SGSM3-206ENST00000467915 CERKQ8TCT0 537 aa25.28■■□□□ 1.64
SGSM3-206ENST00000467915 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
SGSM3-206ENST00000467915 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
SGSM3-206ENST00000467915 CNTLNQ9NXG0 1405 aa25.26■■□□□ 1.63
SGSM3-206ENST00000467915 A2MP01023 1474 aa25.26■■□□□ 1.63
SGSM3-206ENST00000467915 MBD5Q9P267 1494 aa25.26■■□□□ 1.63
SGSM3-206ENST00000467915 SETD1BQ9UPS6 1966 aaKnown RBP25.25■■□□□ 1.63
SGSM3-206ENST00000467915 STRCQ7RTU9 1775 aa25.25■■□□□ 1.63
SGSM3-206ENST00000467915 SUPT6HQ7KZ85 1726 aaKnown RBP25.24■■□□□ 1.63
SGSM3-206ENST00000467915 ZMYM3Q14202 1370 aa25.24■■□□□ 1.63
SGSM3-206ENST00000467915 PLXNC1O60486 1568 aa25.22■■□□□ 1.63
SGSM3-206ENST00000467915 GGT6Q6P531 493 aa25.22■■□□□ 1.63
SGSM3-206ENST00000467915 DMRT2Q9Y5R5 561 aa25.19■■□□□ 1.62
SGSM3-206ENST00000467915 NCOA2Q15596 1464 aa25.19■■□□□ 1.62
SGSM3-206ENST00000467915 NPATQ14207 1427 aa25.15■■□□□ 1.62
SGSM3-206ENST00000467915 MROH2AA6NES4 1674 aa25.13■■□□□ 1.61
SGSM3-206ENST00000467915 CLTCQ00610 1675 aaKnown RBP25.13■■□□□ 1.61
SGSM3-206ENST00000467915 RTEL1-TNFRSF6BF6WH68 1400 aa25.12■■□□□ 1.61
SGSM3-206ENST00000467915 CAMSAP2Q08AD1 1489 aa25.12■■□□□ 1.61
SGSM3-206ENST00000467915 PTPRTO14522 1441 aa25.12■■□□□ 1.61
SGSM3-206ENST00000467915 PTPRKQ15262 1439 aa25.12■■□□□ 1.61
SGSM3-206ENST00000467915 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
SGSM3-206ENST00000467915 DHX29Q7Z478 1369 aaKnown RBP25.11■■□□□ 1.61
SGSM3-206ENST00000467915 VPS8Q8N3P4 1428 aa25.11■■□□□ 1.61
SGSM3-206ENST00000467915 KANK4Q5T7N3 995 aaPredicted RBP25.1■■□□□ 1.61
SGSM3-206ENST00000467915 ADGBQ8N7X0 1667 aa25.09■■□□□ 1.61
SGSM3-206ENST00000467915 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
SGSM3-206ENST00000467915 KIF3BO15066 747 aa25.07■■□□□ 1.6
SGSM3-206ENST00000467915 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
SGSM3-206ENST00000467915 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
SGSM3-206ENST00000467915 NCKAP5LQ9HCH0 1330 aa25.07■■□□□ 1.6
SGSM3-206ENST00000467915 CAMSAP1Q5T5Y3 1602 aa25.06■■□□□ 1.6
SGSM3-206ENST00000467915 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
SGSM3-206ENST00000467915 FBXO31Q5XUX0 539 aaPredicted RBP25.02■■□□□ 1.6
SGSM3-206ENST00000467915 LTBP4Q8N2S1 1624 aa25■■□□□ 1.59
SGSM3-206ENST00000467915 MYO3AQ8NEV4 1616 aa25■■□□□ 1.59
SGSM3-206ENST00000467915 TSPY4P0CV99 314 aa24.98■■□□□ 1.59
SGSM3-206ENST00000467915 TSPY10P0CW01 314 aa24.98■■□□□ 1.59
SGSM3-206ENST00000467915 ARHGEF5Q12774 1597 aa24.97■■□□□ 1.59
SGSM3-206ENST00000467915 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
SGSM3-206ENST00000467915 WASHC2CQ9Y4E1 1318 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms