RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
SSR3-205ENST00000467789 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
SSR3-205ENST00000467789 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
SSR3-205ENST00000467789 PLCH2O75038 1416 aa16.81■□□□□ 0.28
SSR3-205ENST00000467789 CLIP1P30622 1438 aa16.81■□□□□ 0.28
SSR3-205ENST00000467789 TROQ12816 1431 aaPredicted RBP16.81■□□□□ 0.28
SSR3-205ENST00000467789 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
SSR3-205ENST00000467789 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
SSR3-205ENST00000467789 KIF14Q15058 1648 aa16.81■□□□□ 0.28
SSR3-205ENST00000467789 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
SSR3-205ENST00000467789 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
SSR3-205ENST00000467789 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
SSR3-205ENST00000467789 MYO5CQ9NQX4 1742 aa16.79■□□□□ 0.28
SSR3-205ENST00000467789 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
SSR3-205ENST00000467789 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
SSR3-205ENST00000467789 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
SSR3-205ENST00000467789 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
SSR3-205ENST00000467789 EFCAB2Q5VUJ9 269 aa16.75■□□□□ 0.27
SSR3-205ENST00000467789 ARHGEF40Q8TER5 1519 aa16.74■□□□□ 0.27
SSR3-205ENST00000467789 SCAPERQ9BY12 1400 aa16.71■□□□□ 0.27
SSR3-205ENST00000467789 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
SSR3-205ENST00000467789 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
SSR3-205ENST00000467789 ADAMTSL3P82987 1691 aa16.69■□□□□ 0.26
SSR3-205ENST00000467789 ZFYVE16Q7Z3T8 1539 aa16.69■□□□□ 0.26
SSR3-205ENST00000467789 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
SSR3-205ENST00000467789 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
SSR3-205ENST00000467789 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
SSR3-205ENST00000467789 CDC42BPBQ9Y5S2 1711 aa16.67■□□□□ 0.26
SSR3-205ENST00000467789 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
SSR3-205ENST00000467789 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
SSR3-205ENST00000467789 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
SSR3-205ENST00000467789 KDM5CP41229 1560 aa16.63■□□□□ 0.25
SSR3-205ENST00000467789 YEATS2Q9ULM3 1422 aa16.62■□□□□ 0.25
SSR3-205ENST00000467789 CDC42BPAQ5VT25 1732 aa16.62■□□□□ 0.25
SSR3-205ENST00000467789 PTPRMP28827 1452 aa16.62■□□□□ 0.25
SSR3-205ENST00000467789 ATP10AO60312 1499 aa16.61■□□□□ 0.25
SSR3-205ENST00000467789 MADDQ8WXG6 1647 aa16.6■□□□□ 0.25
SSR3-205ENST00000467789 ABCC1P33527 1531 aa16.6■□□□□ 0.25
SSR3-205ENST00000467789 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
SSR3-205ENST00000467789 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
SSR3-205ENST00000467789 C9orf84Q5VXU9 1444 aa16.59■□□□□ 0.25
SSR3-205ENST00000467789 MLH3Q9UHC1 1453 aa16.58■□□□□ 0.24
SSR3-205ENST00000467789 ITSN2Q9NZM3 1697 aa16.57■□□□□ 0.24
SSR3-205ENST00000467789 GPATCH8Q9UKJ3 1502 aaKnown RBP16.56■□□□□ 0.24
SSR3-205ENST00000467789 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
SSR3-205ENST00000467789 REREQ9P2R6 1566 aa16.55■□□□□ 0.24
SSR3-205ENST00000467789 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
SSR3-205ENST00000467789 SIGLEC1Q9BZZ2 1709 aa16.55■□□□□ 0.24
SSR3-205ENST00000467789 CCNB3Q8WWL7 1395 aa16.54■□□□□ 0.24
SSR3-205ENST00000467789 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
SSR3-205ENST00000467789 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
SSR3-205ENST00000467789 DIP2CQ9Y2E4 1556 aa16.53■□□□□ 0.24
SSR3-205ENST00000467789 ARHGEF12Q9NZN5 1544 aa16.53■□□□□ 0.24
SSR3-205ENST00000467789 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
SSR3-205ENST00000467789 SAMD9LQ8IVG5 1584 aa16.52■□□□□ 0.24
SSR3-205ENST00000467789 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.24
SSR3-205ENST00000467789 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.23
SSR3-205ENST00000467789 FER1L4A9Z1Z3 1794 aa16.51■□□□□ 0.23
SSR3-205ENST00000467789 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
SSR3-205ENST00000467789 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
SSR3-205ENST00000467789 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
SSR3-205ENST00000467789 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
SSR3-205ENST00000467789 AGLP35573 1532 aa16.49■□□□□ 0.23
SSR3-205ENST00000467789 SYCP2Q9BX26 1530 aa16.49■□□□□ 0.23
SSR3-205ENST00000467789 KIDINS220Q9ULH0 1771 aa16.49■□□□□ 0.23
SSR3-205ENST00000467789 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
SSR3-205ENST00000467789 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
SSR3-205ENST00000467789 MLECQ14165 292 aa16.47■□□□□ 0.23
SSR3-205ENST00000467789 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
SSR3-205ENST00000467789 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
SSR3-205ENST00000467789 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
SSR3-205ENST00000467789 LMTK3Q96Q04 1460 aa16.43■□□□□ 0.22
SSR3-205ENST00000467789 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.222e-9■■□□□ 12.7
SSR3-205ENST00000467789 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
SSR3-205ENST00000467789 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
SSR3-205ENST00000467789 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
SSR3-205ENST00000467789 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
SSR3-205ENST00000467789 ESF1Q9H501 851 aaKnown RBP16.39■□□□□ 0.21
SSR3-205ENST00000467789 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
SSR3-205ENST00000467789 MBD5Q9P267 1494 aa16.39■□□□□ 0.21
SSR3-205ENST00000467789 SETD1BQ9UPS6 1966 aaKnown RBP16.38■□□□□ 0.21
SSR3-205ENST00000467789 RTEL1-TNFRSF6BF6WH68 1400 aa16.38■□□□□ 0.21
SSR3-205ENST00000467789 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
SSR3-205ENST00000467789 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
SSR3-205ENST00000467789 PREX1Q8TCU6 1659 aa16.37■□□□□ 0.21
SSR3-205ENST00000467789 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
SSR3-205ENST00000467789 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
SSR3-205ENST00000467789 A2MP01023 1474 aa16.35■□□□□ 0.21
SSR3-205ENST00000467789 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
SSR3-205ENST00000467789 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
SSR3-205ENST00000467789 CCDC141Q6ZP82 1450 aa16.34■□□□□ 0.21
SSR3-205ENST00000467789 C3P01024 1663 aa16.34■□□□□ 0.21
SSR3-205ENST00000467789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.27e-7■■□□□ 13.2
SSR3-205ENST00000467789 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
SSR3-205ENST00000467789 ARHGEF5Q12774 1597 aa16.32■□□□□ 0.2
SSR3-205ENST00000467789 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
SSR3-205ENST00000467789 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
SSR3-205ENST00000467789 APLP2Q06481 763 aa16.3■□□□□ 0.2
SSR3-205ENST00000467789 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
SSR3-205ENST00000467789 DHX29Q7Z478 1369 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms