RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 PHF8Q9UPP1 1060 aa8.33□□□□□ -1.08
RIF1-209ENST00000467762 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
RIF1-209ENST00000467762 L3MBTL3Q96JM7 780 aaPredicted RBP8.32□□□□□ -1.08
RIF1-209ENST00000467762 MS4A4AQ96JQ5 239 aa8.32□□□□□ -1.08
RIF1-209ENST00000467762 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.31□□□□□ -1.08
RIF1-209ENST00000467762 SOX12O15370 315 aa8.3□□□□□ -1.08
RIF1-209ENST00000467762 TRIM26Q12899 539 aaPredicted RBP8.3□□□□□ -1.08
RIF1-209ENST00000467762 C3orf67Q6ZVT6 689 aa8.3□□□□□ -1.08
RIF1-209ENST00000467762 BAZ1AQ9NRL2 1556 aaPredicted RBP8.3□□□□□ -1.08
RIF1-209ENST00000467762 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
RIF1-209ENST00000467762 FAM163AQ96GL9 167 aaPredicted RBP8.28□□□□□ -1.08
RIF1-209ENST00000467762 PCGF6Q9BYE7 350 aa8.28□□□□□ -1.08
RIF1-209ENST00000467762 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
RIF1-209ENST00000467762 FBXO22Q8NEZ5 403 aa8.27□□□□□ -1.09
RIF1-209ENST00000467762 MFRPQ9BY79 579 aa8.27□□□□□ -1.09
RIF1-209ENST00000467762 RANGAP1P46060 587 aaPredicted RBP8.26□□□□□ -1.09
RIF1-209ENST00000467762 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
RIF1-209ENST00000467762 MROH2BQ7Z745 1585 aa8.26□□□□□ -1.09
RIF1-209ENST00000467762 LOC105371045A0A1W2PR82 267 aa8.25□□□□□ -1.09
RIF1-209ENST00000467762 G3V3G9 751 aa8.25□□□□□ -1.09
RIF1-209ENST00000467762 TMEM121BQ9BXQ6 578 aaPredicted RBP8.25□□□□□ -1.09
RIF1-209ENST00000467762 POTEMA6NI47 508 aa8.24□□□□□ -1.09
RIF1-209ENST00000467762 MICALL2Q8IY33 904 aa8.24□□□□□ -1.09
RIF1-209ENST00000467762 NLRP6P59044 892 aa8.23□□□□□ -1.09
RIF1-209ENST00000467762 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
RIF1-209ENST00000467762 CECR2Q9BXF3 1484 aa8.23□□□□□ -1.09
RIF1-209ENST00000467762 HS6ST3Q8IZP7 471 aa8.22□□□□□ -1.09
RIF1-209ENST00000467762 WIZO95785 1651 aa8.21□□□□□ -1.09
RIF1-209ENST00000467762 ST18O60284 1047 aa8.2□□□□□ -1.1
RIF1-209ENST00000467762 TMEM92Q6UXU6 159 aa8.2□□□□□ -1.1
RIF1-209ENST00000467762 TOP2AP11388 1531 aaKnown RBP8.19□□□□□ -1.1
RIF1-209ENST00000467762 CHGAP10645 457 aaKnown RBP8.19□□□□□ -1.1
RIF1-209ENST00000467762 SMARCA4P51532 1647 aa8.18□□□□□ -1.1
RIF1-209ENST00000467762 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.1
RIF1-209ENST00000467762 EIF4G1Q04637 1599 aaKnown RBP8.15□□□□□ -1.1
RIF1-209ENST00000467762 SNPHO15079 494 aa8.15□□□□□ -1.1
RIF1-209ENST00000467762 PPP1R37O75864 691 aa8.15□□□□□ -1.1
RIF1-209ENST00000467762 NKX1-1Q15270 411 aaPredicted RBP8.15□□□□□ -1.1
RIF1-209ENST00000467762 EEA1Q15075 1411 aa8.14□□□□□ -1.11
RIF1-209ENST00000467762 HOXB3P14651 431 aaPredicted RBP8.13□□□□□ -1.11
RIF1-209ENST00000467762 KDM2AQ9Y2K7 1162 aa8.13□□□□□ -1.11
RIF1-209ENST00000467762 PEG3Q9GZU2 1588 aa8.11□□□□□ -1.11
RIF1-209ENST00000467762 MARVELD3Q96A59 401 aa8.11□□□□□ -1.11
RIF1-209ENST00000467762 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.11□□□□□ -1.11
RIF1-209ENST00000467762 DNAJC5Q9H3Z4 198 aa8.1□□□□□ -1.11
RIF1-209ENST00000467762 SMARCA2P51531 1590 aa8.1□□□□□ -1.11
RIF1-209ENST00000467762 CCDC88BA6NC98 1476 aa8.08□□□□□ -1.12
RIF1-209ENST00000467762 C14orf37Q86TY3 774 aa8.08□□□□□ -1.12
RIF1-209ENST00000467762 TMEM132AQ24JP5 1023 aa8.07□□□□□ -1.12
RIF1-209ENST00000467762 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
RIF1-209ENST00000467762 C2orf72A6NCS6 295 aa8.06□□□□□ -1.12
RIF1-209ENST00000467762 KIF3CO14782 793 aa8.06□□□□□ -1.12
RIF1-209ENST00000467762 DOK7Q18PE1 504 aa8.05□□□□□ -1.12
RIF1-209ENST00000467762 EMP3P54852 163 aa8.04□□□□□ -1.12
RIF1-209ENST00000467762 FAM9AQ8IZU1 332 aaPredicted RBP8.04□□□□□ -1.12
RIF1-209ENST00000467762 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
RIF1-209ENST00000467762 BICRAQ9NZM4 1560 aa8.03□□□□□ -1.12
RIF1-209ENST00000467762 NBR1Q14596 966 aa8.03□□□□□ -1.12
RIF1-209ENST00000467762 CDAN1Q8IWY9 1227 aa8.03□□□□□ -1.12
RIF1-209ENST00000467762 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
RIF1-209ENST00000467762 HOXB1P14653 301 aaPredicted RBP8.02□□□□□ -1.13
RIF1-209ENST00000467762 PODXL2Q9NZ53 605 aa8.02□□□□□ -1.13
RIF1-209ENST00000467762 POTEB3A0JP26 581 aa8.01□□□□□ -1.13
RIF1-209ENST00000467762 GTPBP6O43824 516 aaPredicted RBP8.01□□□□□ -1.13
RIF1-209ENST00000467762 POTEBQ6S5H4 581 aa8.01□□□□□ -1.13
RIF1-209ENST00000467762 PAXIP1Q6ZW49 1069 aaPredicted RBP8.01□□□□□ -1.13
RIF1-209ENST00000467762 BBXQ8WY36 941 aaPredicted RBP8.01□□□□□ -1.13
RIF1-209ENST00000467762 CFAP44Q96MT7 982 aa8.01□□□□□ -1.13
RIF1-209ENST00000467762 PCDH10Q9P2E7 1040 aa8.01□□□□□ -1.13
RIF1-209ENST00000467762 FAM205CA6NFA0 338 aa8□□□□□ -1.13
RIF1-209ENST00000467762 TMC2Q8TDI7 906 aa8□□□□□ -1.13
RIF1-209ENST00000467762 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
RIF1-209ENST00000467762 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
RIF1-209ENST00000467762 GPR153Q6NV75 609 aa7.98□□□□□ -1.13
RIF1-209ENST00000467762 PPARGC1BQ86YN6 1023 aaKnown RBP7.98□□□□□ -1.13
RIF1-209ENST00000467762 RYDENQ9NUL5 291 aaKnown RBP7.98□□□□□ -1.13
RIF1-209ENST00000467762 KHSRPQ92945 711 aaKnown RBP eCLIP7.97□□□□□ -1.13
RIF1-209ENST00000467762 ZSWIM6Q9HCJ5 1215 aa7.97□□□□□ -1.13
RIF1-209ENST00000467762 GOLGA3Q08378 1498 aa7.96□□□□□ -1.13
RIF1-209ENST00000467762 ARSIQ5FYB1 569 aa7.96□□□□□ -1.14
RIF1-209ENST00000467762 ABCC8Q09428 1581 aa7.96□□□□□ -1.14
RIF1-209ENST00000467762 KIF21BO75037 1637 aa7.95□□□□□ -1.14
RIF1-209ENST00000467762 CEP162Q5TB80 1403 aa7.95□□□□□ -1.14
RIF1-209ENST00000467762 ATAD2BQ9ULI0 1458 aa7.94□□□□□ -1.14
RIF1-209ENST00000467762 GPHNQ9NQX3 736 aaPredicted RBP7.94□□□□□ -1.14
RIF1-209ENST00000467762 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
RIF1-209ENST00000467762 CEP164Q9UPV0 1460 aa7.94□□□□□ -1.14
RIF1-209ENST00000467762 DSG2Q14126 1118 aa7.93□□□□□ -1.14
RIF1-209ENST00000467762 ERBB3P21860 1342 aa7.93□□□□□ -1.14
RIF1-209ENST00000467762 FOXK1P85037 733 aa7.92□□□□□ -1.14
RIF1-209ENST00000467762 VARS2Q5ST30 1063 aaKnown RBP7.92□□□□□ -1.14
RIF1-209ENST00000467762 PLPP6Q8IY26 295 aa7.92□□□□□ -1.14
RIF1-209ENST00000467762 CRISPLD2Q9H0B8 497 aa7.92□□□□□ -1.14
RIF1-209ENST00000467762 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
RIF1-209ENST00000467762 SLC34A2O95436 690 aa7.91□□□□□ -1.14
RIF1-209ENST00000467762 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
RIF1-209ENST00000467762 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
RIF1-209ENST00000467762 PCDHGA4Q9Y5G9 962 aa7.91□□□□□ -1.14
RIF1-209ENST00000467762 SOGA1O94964 1423 aa7.9□□□□□ -1.14
RIF1-209ENST00000467762 NUDT7P0C024 238 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms