RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 PHF8Q9UPP1 1060 aa10.59□□□□□ -0.71
SSR3-204ENST00000467733 NLRP6P59044 892 aa10.56□□□□□ -0.72
SSR3-204ENST00000467733 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
SSR3-204ENST00000467733 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
SSR3-204ENST00000467733 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.73
SSR3-204ENST00000467733 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
SSR3-204ENST00000467733 GPR153Q6NV75 609 aa10.49□□□□□ -0.73
SSR3-204ENST00000467733 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
SSR3-204ENST00000467733 STK25O00506 426 aa10.47□□□□□ -0.73
SSR3-204ENST00000467733 ECM2O94769 699 aaPredicted RBP10.46□□□□□ -0.73
SSR3-204ENST00000467733 ZNF687Q8N1G0 1237 aa10.46□□□□□ -0.73
SSR3-204ENST00000467733 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
SSR3-204ENST00000467733 PTGER2P43116 358 aa10.41□□□□□ -0.74
SSR3-204ENST00000467733 ARSIQ5FYB1 569 aa10.41□□□□□ -0.74
SSR3-204ENST00000467733 RNF166Q96A37 237 aaPredicted RBP10.41□□□□□ -0.74
SSR3-204ENST00000467733 ZNF316A6NFI3 1004 aaPredicted RBP10.38□□□□□ -0.75
SSR3-204ENST00000467733 KIF3CO14782 793 aa10.38□□□□□ -0.75
SSR3-204ENST00000467733 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
SSR3-204ENST00000467733 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
SSR3-204ENST00000467733 PKD2Q13563 968 aa10.34□□□□□ -0.75
SSR3-204ENST00000467733 RGL2O15211 777 aa10.33□□□□□ -0.76
SSR3-204ENST00000467733 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
SSR3-204ENST00000467733 SLC34A2O95436 690 aa10.32□□□□□ -0.76
SSR3-204ENST00000467733 KHSRPQ92945 711 aaKnown RBP eCLIP10.32□□□□□ -0.766e-7■■■□□ 16.4
SSR3-204ENST00000467733 PBX2P40425 430 aa10.3□□□□□ -0.76
SSR3-204ENST00000467733 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.76
SSR3-204ENST00000467733 ANKRD13DQ6ZTN6 518 aa10.29□□□□□ -0.76
SSR3-204ENST00000467733 NUDT7P0C024 238 aa10.28□□□□□ -0.76
SSR3-204ENST00000467733 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
SSR3-204ENST00000467733 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
SSR3-204ENST00000467733 PSDA5PKW4 1024 aaPredicted RBP10.23□□□□□ -0.77
SSR3-204ENST00000467733 PPP1R37O75864 691 aa10.2□□□□□ -0.78
SSR3-204ENST00000467733 HS6ST3Q8IZP7 471 aa10.19□□□□□ -0.78
SSR3-204ENST00000467733 FOXK1P85037 733 aa10.17□□□□□ -0.78
SSR3-204ENST00000467733 PTCD2Q8WV60 388 aaKnown RBP10.17□□□□□ -0.78
SSR3-204ENST00000467733 POTEEQ6S8J3 1075 aa10.15□□□□□ -0.78
SSR3-204ENST00000467733 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
SSR3-204ENST00000467733 ARHGAP33O14559 1287 aa10.14□□□□□ -0.79
SSR3-204ENST00000467733 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
SSR3-204ENST00000467733 PLPP6Q8IY26 295 aa10.13□□□□□ -0.79
SSR3-204ENST00000467733 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
SSR3-204ENST00000467733 TBC1D12O60347 775 aa10.12□□□□□ -0.79
SSR3-204ENST00000467733 ADGRD1Q6QNK2 874 aa10.12□□□□□ -0.79
SSR3-204ENST00000467733 RYDENQ9NUL5 291 aaKnown RBP10.11□□□□□ -0.79
SSR3-204ENST00000467733 PPP4R3BQ5MIZ7 849 aa10.1□□□□□ -0.79
SSR3-204ENST00000467733 TK2O00142 265 aa10.09□□□□□ -0.79
SSR3-204ENST00000467733 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
SSR3-204ENST00000467733 CHGAP10645 457 aaKnown RBP10.08□□□□□ -0.8
SSR3-204ENST00000467733 DSG2Q14126 1118 aa10.08□□□□□ -0.8
SSR3-204ENST00000467733 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
SSR3-204ENST00000467733 DNAJC5Q9H3Z4 198 aa10.07□□□□□ -0.8
SSR3-204ENST00000467733 HRO43593 1189 aa10.02□□□□□ -0.81
SSR3-204ENST00000467733 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
SSR3-204ENST00000467733 ABCC9O60706 1549 aa10.02□□□□□ -0.81
SSR3-204ENST00000467733 PSEN2P49810 448 aa10.01□□□□□ -0.81
SSR3-204ENST00000467733 DMRTA1Q5VZB9 504 aa10.01□□□□□ -0.81
SSR3-204ENST00000467733 STAC3Q96MF2 364 aa10□□□□□ -0.81
SSR3-204ENST00000467733 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
SSR3-204ENST00000467733 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
SSR3-204ENST00000467733 CRISPLD2Q9H0B8 497 aa9.98□□□□□ -0.81
SSR3-204ENST00000467733 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
SSR3-204ENST00000467733 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
SSR3-204ENST00000467733 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
SSR3-204ENST00000467733 ZNF454Q8N9F8 522 aa9.94□□□□□ -0.82
SSR3-204ENST00000467733 PDE4AP27815 886 aa9.93□□□□□ -0.82
SSR3-204ENST00000467733 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
SSR3-204ENST00000467733 BCL2L12Q9HB09 334 aa9.93□□□□□ -0.82
SSR3-204ENST00000467733 SLC4A5Q9BY07 1137 aa9.92□□□□□ -0.82
SSR3-204ENST00000467733 VPS9D1Q9Y2B5 631 aa9.91□□□□□ -0.82
SSR3-204ENST00000467733 FOSBP53539 338 aa9.9□□□□□ -0.82
SSR3-204ENST00000467733 PTPREP23469 700 aa9.89□□□□□ -0.83
SSR3-204ENST00000467733 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
SSR3-204ENST00000467733 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
SSR3-204ENST00000467733 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
SSR3-204ENST00000467733 DDX27Q96GQ7 796 aaKnown RBP9.85□□□□□ -0.83
SSR3-204ENST00000467733 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
SSR3-204ENST00000467733 EVI5O60447 810 aa9.84□□□□□ -0.83
SSR3-204ENST00000467733 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
SSR3-204ENST00000467733 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
SSR3-204ENST00000467733 LARP6Q9BRS8 491 aaKnown RBP9.83□□□□□ -0.84
SSR3-204ENST00000467733 ZBED2Q9BTP6 218 aa9.83□□□□□ -0.84
SSR3-204ENST00000467733 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
SSR3-204ENST00000467733 BHMG1C9JSJ3 638 aaPredicted RBP9.82□□□□□ -0.84
SSR3-204ENST00000467733 MFSD10Q14728 455 aa9.82□□□□□ -0.84
SSR3-204ENST00000467733 NBPF3Q9H094 633 aa9.82□□□□□ -0.84
SSR3-204ENST00000467733 PTPN5P54829 565 aa9.81□□□□□ -0.84
SSR3-204ENST00000467733 MRPL50Q8N5N7 158 aaKnown RBP9.81□□□□□ -0.84
SSR3-204ENST00000467733 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
SSR3-204ENST00000467733 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
SSR3-204ENST00000467733 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
SSR3-204ENST00000467733 WNT2BQ93097 391 aa9.78□□□□□ -0.84
SSR3-204ENST00000467733 ADAM33Q9BZ11 813 aa9.78□□□□□ -0.84
SSR3-204ENST00000467733 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
SSR3-204ENST00000467733 RGS20O76081 388 aa9.76□□□□□ -0.85
SSR3-204ENST00000467733 FBXW7Q969H0 707 aa9.74□□□□□ -0.85
SSR3-204ENST00000467733 DCAF8L2P0C7V8 631 aa9.73□□□□□ -0.85
SSR3-204ENST00000467733 EMILIN3Q9NT22 766 aa9.73□□□□□ -0.85
SSR3-204ENST00000467733 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
SSR3-204ENST00000467733 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
SSR3-204ENST00000467733 PHF14O94880 888 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms