RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PLCH2O75038 1416 aa10.5□□□□□ -0.73
SCAF4-204ENST00000467731 CD109Q6YHK3 1445 aa10.5□□□□□ -0.73
SCAF4-204ENST00000467731 ARHGAP5Q13017 1502 aa10.5□□□□□ -0.73
SCAF4-204ENST00000467731 PTPN23Q9H3S7 1636 aa10.49□□□□□ -0.73
SCAF4-204ENST00000467731 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
SCAF4-204ENST00000467731 MIA2Q96PC5 1412 aa10.49□□□□□ -0.73
SCAF4-204ENST00000467731 ARAP3Q8WWN8 1544 aa10.48□□□□□ -0.73
SCAF4-204ENST00000467731 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
SCAF4-204ENST00000467731 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
SCAF4-204ENST00000467731 TRIM26Q12899 539 aaPredicted RBP10.47□□□□□ -0.73
SCAF4-204ENST00000467731 SAMD9LQ8IVG5 1584 aa10.46□□□□□ -0.73
SCAF4-204ENST00000467731 FANCAO15360 1455 aa10.46□□□□□ -0.73
SCAF4-204ENST00000467731 CAMSAP2Q08AD1 1489 aa10.46□□□□□ -0.73
SCAF4-204ENST00000467731 FAM50AQ14320 339 aaKnown RBP10.46□□□□□ -0.73
SCAF4-204ENST00000467731 PPRC1Q5VV67 1664 aaKnown RBP10.46□□□□□ -0.74
SCAF4-204ENST00000467731 TCOF1Q13428 1488 aaKnown RBP10.46□□□□□ -0.74
SCAF4-204ENST00000467731 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
SCAF4-204ENST00000467731 EFCAB2Q5VUJ9 269 aa10.44□□□□□ -0.74
SCAF4-204ENST00000467731 CFAP74Q9C0B2 1584 aa10.44□□□□□ -0.74
SCAF4-204ENST00000467731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.43□□□□□ -0.745e-6■■■■■ 46.2
SCAF4-204ENST00000467731 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
SCAF4-204ENST00000467731 ABCC1P33527 1531 aa10.42□□□□□ -0.74
SCAF4-204ENST00000467731 AKNAQ7Z591 1439 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 ITGAEP38570 1179 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 ADGRL1O94910 1474 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 NEO1Q92859 1461 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
SCAF4-204ENST00000467731 PCGF6Q9BYE7 350 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 ARHGEF12Q9NZN5 1544 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 PLEKHH2Q8IVE3 1493 aa10.41□□□□□ -0.74
SCAF4-204ENST00000467731 HNRNPMP52272 730 aaKnown RBP eCLIP10.41□□□□□ -0.74
SCAF4-204ENST00000467731 MBD5Q9P267 1494 aa10.4□□□□□ -0.74
SCAF4-204ENST00000467731 KIAA1107Q9UPP5 1409 aa10.4□□□□□ -0.74
SCAF4-204ENST00000467731 ARHGEF5Q12774 1597 aa10.39□□□□□ -0.75
SCAF4-204ENST00000467731 CROCC2H7BZ55 1655 aa10.39□□□□□ -0.75
SCAF4-204ENST00000467731 DAPK1P53355 1430 aa10.39□□□□□ -0.75
SCAF4-204ENST00000467731 SCAPERQ9BY12 1400 aa10.39□□□□□ -0.75
SCAF4-204ENST00000467731 ABCC5O15440 1437 aa10.38□□□□□ -0.75
SCAF4-204ENST00000467731 PTPRKQ15262 1439 aa10.38□□□□□ -0.75
SCAF4-204ENST00000467731 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
SCAF4-204ENST00000467731 TRAPPC8Q9Y2L5 1435 aa10.38□□□□□ -0.75
SCAF4-204ENST00000467731 RSPH4AQ5TD94 716 aa10.36□□□□□ -0.75
SCAF4-204ENST00000467731 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
SCAF4-204ENST00000467731 AFAP1Q8N556 730 aa10.35□□□□□ -0.75
SCAF4-204ENST00000467731 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
SCAF4-204ENST00000467731 ZNF518AQ6AHZ1 1483 aa10.35□□□□□ -0.75
SCAF4-204ENST00000467731 POGZQ7Z3K3 1410 aa10.35□□□□□ -0.75
SCAF4-204ENST00000467731 DENND4BO75064 1496 aaPredicted RBP10.35□□□□□ -0.75
SCAF4-204ENST00000467731 C9orf84Q5VXU9 1444 aa10.35□□□□□ -0.75
SCAF4-204ENST00000467731 SHANK2Q9UPX8 1470 aa10.34□□□□□ -0.75
SCAF4-204ENST00000467731 RAPGEF3O95398 923 aa10.34□□□□□ -0.75
SCAF4-204ENST00000467731 TSPY4P0CV99 314 aa10.34□□□□□ -0.75
SCAF4-204ENST00000467731 TSPY10P0CW01 314 aa10.34□□□□□ -0.75
SCAF4-204ENST00000467731 ADGBQ8N7X0 1667 aa10.34□□□□□ -0.75
SCAF4-204ENST00000467731 KDM5CP41229 1560 aa10.34□□□□□ -0.75
SCAF4-204ENST00000467731 COL17A1Q9UMD9 1497 aaPredicted RBP10.33□□□□□ -0.76
SCAF4-204ENST00000467731 FRMPD1Q5SYB0 1578 aa10.33□□□□□ -0.76
SCAF4-204ENST00000467731 MAST1Q9Y2H9 1570 aa10.33□□□□□ -0.76
SCAF4-204ENST00000467731 ZFYVE16Q7Z3T8 1539 aa10.32□□□□□ -0.76
SCAF4-204ENST00000467731 INO80Q9ULG1 1556 aaPredicted RBP10.31□□□□□ -0.76
SCAF4-204ENST00000467731 SPAG9O60271 1321 aaKnown RBP10.31□□□□□ -0.76
SCAF4-204ENST00000467731 ADGRL2O95490 1459 aa10.31□□□□□ -0.76
SCAF4-204ENST00000467731 KIDINS220Q9ULH0 1771 aa10.31□□□□□ -0.76
SCAF4-204ENST00000467731 HECW2Q9P2P5 1572 aa10.31□□□□□ -0.76
SCAF4-204ENST00000467731 ATP7AQ04656 1500 aa10.31□□□□□ -0.76
SCAF4-204ENST00000467731 NCOA1Q15788 1441 aa10.31□□□□□ -0.76
SCAF4-204ENST00000467731 RRP7BPQ9NSQ0 103 aa10.31□□□□□ -0.76
SCAF4-204ENST00000467731 ROCK1Q13464 1354 aa10.3□□□□□ -0.76
SCAF4-204ENST00000467731 KDM6BO15054 1643 aa10.3□□□□□ -0.76
SCAF4-204ENST00000467731 PLXNC1O60486 1568 aa10.3□□□□□ -0.76
SCAF4-204ENST00000467731 ANKRD30AQ9BXX3 1397 aa10.3□□□□□ -0.76
SCAF4-204ENST00000467731 RTEL1-TNFRSF6BF6WH68 1400 aa10.3□□□□□ -0.76
SCAF4-204ENST00000467731 GCC2Q8IWJ2 1684 aa10.3□□□□□ -0.76
SCAF4-204ENST00000467731 MYT1LQ9UL68 1186 aa10.29□□□□□ -0.76
SCAF4-204ENST00000467731 HFM1A2PYH4 1435 aa10.29□□□□□ -0.76
SCAF4-204ENST00000467731 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
SCAF4-204ENST00000467731 ZMYM4Q5VZL5 1548 aa10.29□□□□□ -0.76
SCAF4-204ENST00000467731 NAIPQ13075 1403 aa10.28□□□□□ -0.76
SCAF4-204ENST00000467731 KIF15Q9NS87 1388 aa10.28□□□□□ -0.76
SCAF4-204ENST00000467731 ABCA6Q8N139 1617 aa10.27□□□□□ -0.76
SCAF4-204ENST00000467731 SETD5Q9C0A6 1442 aa10.27□□□□□ -0.77
SCAF4-204ENST00000467731 YEATS2Q9ULM3 1422 aa10.26□□□□□ -0.77
SCAF4-204ENST00000467731 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
SCAF4-204ENST00000467731 DIP2CQ9Y2E4 1556 aa10.25□□□□□ -0.77
SCAF4-204ENST00000467731 RAB3GAP2Q9H2M9 1393 aa10.25□□□□□ -0.77
SCAF4-204ENST00000467731 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
SCAF4-204ENST00000467731 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
SCAF4-204ENST00000467731 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
SCAF4-204ENST00000467731 A2MP01023 1474 aa10.22□□□□□ -0.77
SCAF4-204ENST00000467731 ERBINQ96RT1 1412 aa10.22□□□□□ -0.77
SCAF4-204ENST00000467731 DHX29Q7Z478 1369 aaKnown RBP10.21□□□□□ -0.77
SCAF4-204ENST00000467731 ATP10AO60312 1499 aa10.21□□□□□ -0.78
SCAF4-204ENST00000467731 SIGLEC1Q9BZZ2 1709 aa10.2□□□□□ -0.78
SCAF4-204ENST00000467731 EIF2AK4Q9P2K8 1649 aaKnown RBP10.2□□□□□ -0.78
SCAF4-204ENST00000467731 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
SCAF4-204ENST00000467731 HRCP23327 699 aa10.19□□□□□ -0.78
SCAF4-204ENST00000467731 BCORL1Q5H9F3 1711 aa10.18□□□□□ -0.78
SCAF4-204ENST00000467731 KIF3BO15066 747 aa10.18□□□□□ -0.78
SCAF4-204ENST00000467731 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms