RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 ARAP3Q8WWN8 1544 aa26.36■■□□□ 1.81
VARS2-204ENST00000467717 FANCAO15360 1455 aa26.34■■□□□ 1.81
VARS2-204ENST00000467717 MYOM3Q5VTT5 1437 aa26.33■■□□□ 1.81
VARS2-204ENST00000467717 ARHGAP5Q13017 1502 aa26.33■■□□□ 1.81
VARS2-204ENST00000467717 NEO1Q92859 1461 aa26.31■■□□□ 1.8
VARS2-204ENST00000467717 ZNF777Q9ULD5 760 aaPredicted RBP26.3■■□□□ 1.8
VARS2-204ENST00000467717 MYO5CQ9NQX4 1742 aa26.3■■□□□ 1.8
VARS2-204ENST00000467717 PREX2Q70Z35 1606 aa26.29■■□□□ 1.8
VARS2-204ENST00000467717 MIA2Q96PC5 1412 aa26.29■■□□□ 1.8
VARS2-204ENST00000467717 AKNAQ7Z591 1439 aa26.28■■□□□ 1.8
VARS2-204ENST00000467717 PPRC1Q5VV67 1664 aaKnown RBP26.28■■□□□ 1.8
VARS2-204ENST00000467717 CDC42BPAQ5VT25 1732 aa26.25■■□□□ 1.79
VARS2-204ENST00000467717 FGD6Q6ZV73 1430 aa26.23■■□□□ 1.79
VARS2-204ENST00000467717 ZNF644Q9H582 1327 aaPredicted RBP26.23■■□□□ 1.79
VARS2-204ENST00000467717 ITSN2Q9NZM3 1697 aa26.23■■□□□ 1.79
VARS2-204ENST00000467717 CDC42BPBQ9Y5S2 1711 aa26.22■■□□□ 1.79
VARS2-204ENST00000467717 CFAP74Q9C0B2 1584 aa26.21■■□□□ 1.79
VARS2-204ENST00000467717 ADGRL1O94910 1474 aa26.21■■□□□ 1.79
VARS2-204ENST00000467717 PLEKHH2Q8IVE3 1493 aa26.2■■□□□ 1.78
VARS2-204ENST00000467717 SCAPERQ9BY12 1400 aa26.19■■□□□ 1.78
VARS2-204ENST00000467717 KIAA1107Q9UPP5 1409 aa26.19■■□□□ 1.78
VARS2-204ENST00000467717 CAMSAP2Q08AD1 1489 aa26.16■■□□□ 1.78
VARS2-204ENST00000467717 SAMD9LQ8IVG5 1584 aa26.16■■□□□ 1.78
VARS2-204ENST00000467717 HECW2Q9P2P5 1572 aa26.16■■□□□ 1.78
VARS2-204ENST00000467717 HNRNPMP52272 730 aaKnown RBP eCLIP26.15■■□□□ 1.78
VARS2-204ENST00000467717 DENND4BO75064 1496 aaPredicted RBP26.15■■□□□ 1.78
VARS2-204ENST00000467717 COL17A1Q9UMD9 1497 aaPredicted RBP26.14■■□□□ 1.78
VARS2-204ENST00000467717 ABCC1P33527 1531 aa26.14■■□□□ 1.77
VARS2-204ENST00000467717 TCOF1Q13428 1488 aaKnown RBP26.13■■□□□ 1.77
VARS2-204ENST00000467717 RAPGEF3O95398 923 aa26.13■■□□□ 1.77
VARS2-204ENST00000467717 FAM50AQ14320 339 aaKnown RBP26.13■■□□□ 1.77
VARS2-204ENST00000467717 RSPH4AQ5TD94 716 aa26.12■■□□□ 1.77
VARS2-204ENST00000467717 ARHGEF12Q9NZN5 1544 aa26.12■■□□□ 1.77
VARS2-204ENST00000467717 RRBP1Q9P2E9 1410 aaKnown RBP26.11■■□□□ 1.77
VARS2-204ENST00000467717 MBD5Q9P267 1494 aa26.1■■□□□ 1.77
VARS2-204ENST00000467717 POGZQ7Z3K3 1410 aa26.09■■□□□ 1.77
VARS2-204ENST00000467717 TRAPPC8Q9Y2L5 1435 aa26.09■■□□□ 1.77
VARS2-204ENST00000467717 AFAP1Q8N556 730 aa26.09■■□□□ 1.77
VARS2-204ENST00000467717 PTPN23Q9H3S7 1636 aa26.09■■□□□ 1.77
VARS2-204ENST00000467717 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
VARS2-204ENST00000467717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.07■■□□□ 1.76
VARS2-204ENST00000467717 ZNF518AQ6AHZ1 1483 aa26.06■■□□□ 1.76
VARS2-204ENST00000467717 CCDC141Q6ZP82 1450 aa26.03■■□□□ 1.76
VARS2-204ENST00000467717 TSPY4P0CV99 314 aa26.01■■□□□ 1.75
VARS2-204ENST00000467717 TSPY10P0CW01 314 aa26.01■■□□□ 1.75
VARS2-204ENST00000467717 ARHGEF5Q12774 1597 aa26■■□□□ 1.75
VARS2-204ENST00000467717 SPAG9O60271 1321 aaKnown RBP26■■□□□ 1.75
VARS2-204ENST00000467717 ABCC5O15440 1437 aa25.99■■□□□ 1.75
VARS2-204ENST00000467717 FRMPD1Q5SYB0 1578 aa25.97■■□□□ 1.75
VARS2-204ENST00000467717 DAPK1P53355 1430 aa25.97■■□□□ 1.75
VARS2-204ENST00000467717 KDM5CP41229 1560 aa25.96■■□□□ 1.75
VARS2-204ENST00000467717 MYT1LQ9UL68 1186 aa25.96■■□□□ 1.75
VARS2-204ENST00000467717 MLH3Q9UHC1 1453 aa25.95■■□□□ 1.74
VARS2-204ENST00000467717 RICTORQ6R327 1708 aa25.94■■□□□ 1.74
VARS2-204ENST00000467717 MAGI2Q86UL8 1455 aa25.94■■□□□ 1.74
VARS2-204ENST00000467717 ZMYM4Q5VZL5 1548 aa25.93■■□□□ 1.74
VARS2-204ENST00000467717 ITGAEP38570 1179 aa25.93■■□□□ 1.74
VARS2-204ENST00000467717 RTEL1-TNFRSF6BF6WH68 1400 aa25.92■■□□□ 1.74
VARS2-204ENST00000467717 C9orf84Q5VXU9 1444 aa25.91■■□□□ 1.74
VARS2-204ENST00000467717 DNMT1P26358 1616 aaKnown RBP25.9■■□□□ 1.74
VARS2-204ENST00000467717 SHANK2Q9UPX8 1470 aa25.9■■□□□ 1.74
VARS2-204ENST00000467717 CHIC2Q9UKJ5 165 aa25.88■■□□□ 1.73
VARS2-204ENST00000467717 PTPRKQ15262 1439 aa25.88■■□□□ 1.73
VARS2-204ENST00000467717 YEATS2Q9ULM3 1422 aa25.87■■□□□ 1.73
VARS2-204ENST00000467717 ATP7AQ04656 1500 aa25.85■■□□□ 1.73
VARS2-204ENST00000467717 ZFYVE16Q7Z3T8 1539 aa25.85■■□□□ 1.73
VARS2-204ENST00000467717 MAST1Q9Y2H9 1570 aa25.83■■□□□ 1.73
VARS2-204ENST00000467717 ANKRD30AQ9BXX3 1397 aa25.82■■□□□ 1.72
VARS2-204ENST00000467717 INO80Q9ULG1 1556 aaPredicted RBP25.82■■□□□ 1.72
VARS2-204ENST00000467717 ROCK1Q13464 1354 aa25.8■■□□□ 1.72
VARS2-204ENST00000467717 NCOA1Q15788 1441 aa25.8■■□□□ 1.72
VARS2-204ENST00000467717 ATP10AO60312 1499 aa25.79■■□□□ 1.72
VARS2-204ENST00000467717 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
VARS2-204ENST00000467717 RRP7BPQ9NSQ0 103 aa25.79■■□□□ 1.72
VARS2-204ENST00000467717 ADGRL2O95490 1459 aa25.79■■□□□ 1.72
VARS2-204ENST00000467717 KIDINS220Q9ULH0 1771 aa25.78■■□□□ 1.72
VARS2-204ENST00000467717 ARHGEF40Q8TER5 1519 aa25.78■■□□□ 1.72
VARS2-204ENST00000467717 FBXO41Q8TF61 875 aa25.77■■□□□ 1.72
VARS2-204ENST00000467717 KIF15Q9NS87 1388 aa25.77■■□□□ 1.72
VARS2-204ENST00000467717 CROCC2H7BZ55 1655 aa25.77■■□□□ 1.72
VARS2-204ENST00000467717 DIP2CQ9Y2E4 1556 aa25.75■■□□□ 1.71
VARS2-204ENST00000467717 DHX29Q7Z478 1369 aaKnown RBP25.74■■□□□ 1.71
VARS2-204ENST00000467717 A2MP01023 1474 aa25.73■■□□□ 1.71
VARS2-204ENST00000467717 ABCA6Q8N139 1617 aa25.73■■□□□ 1.71
VARS2-204ENST00000467717 PLXNC1O60486 1568 aa25.72■■□□□ 1.71
VARS2-204ENST00000467717 DUOX2Q9NRD8 1548 aa25.68■■□□□ 1.7
VARS2-204ENST00000467717 ARID4BQ4LE39 1312 aaPredicted RBP25.67■■□□□ 1.7
VARS2-204ENST00000467717 REREQ9P2R6 1566 aa25.67■■□□□ 1.7
VARS2-204ENST00000467717 HFM1A2PYH4 1435 aa25.65■■□□□ 1.7
VARS2-204ENST00000467717 ADGBQ8N7X0 1667 aa25.64■■□□□ 1.7
VARS2-204ENST00000467717 ERBINQ96RT1 1412 aa25.64■■□□□ 1.7
VARS2-204ENST00000467717 ANKRD50Q9ULJ7 1429 aa25.64■■□□□ 1.7
VARS2-204ENST00000467717 AGLP35573 1532 aa25.63■■□□□ 1.69
VARS2-204ENST00000467717 NAIPQ13075 1403 aa25.63■■□□□ 1.69
VARS2-204ENST00000467717 KIF3BO15066 747 aa25.62■■□□□ 1.69
VARS2-204ENST00000467717 MLECQ14165 292 aa25.56■■□□□ 1.68
VARS2-204ENST00000467717 GGT6Q6P531 493 aa25.55■■□□□ 1.68
VARS2-204ENST00000467717 SETD5Q9C0A6 1442 aa25.54■■□□□ 1.68
VARS2-204ENST00000467717 SIGLEC1Q9BZZ2 1709 aa25.51■■□□□ 1.68
VARS2-204ENST00000467717 PCGF6Q9BYE7 350 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms