RNA–Protein interactions for RNA: ENST00000467095.5

SYN3-208, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-208ENST00000467095 EPRSP07814 1512 aaKnown RBP11.27□□□□□ -0.61
SYN3-208ENST00000467095 FYCO1Q9BQS8 1478 aa11.26□□□□□ -0.61
SYN3-208ENST00000467095 MAP3K4Q9Y6R4 1608 aa11.25□□□□□ -0.61
SYN3-208ENST00000467095 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
SYN3-208ENST00000467095 KIF14Q15058 1648 aa11.24□□□□□ -0.61
SYN3-208ENST00000467095 ARID3CA6NKF2 412 aa11.24□□□□□ -0.61
SYN3-208ENST00000467095 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
SYN3-208ENST00000467095 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
SYN3-208ENST00000467095 VPS8Q8N3P4 1428 aa11.23□□□□□ -0.61
SYN3-208ENST00000467095 ABCC10Q5T3U5 1492 aa11.23□□□□□ -0.61
SYN3-208ENST00000467095 GLI2P10070 1586 aa11.23□□□□□ -0.61
SYN3-208ENST00000467095 CDC42BPAQ5VT25 1732 aa11.22□□□□□ -0.61
SYN3-208ENST00000467095 ABCA9Q8IUA7 1624 aa11.22□□□□□ -0.61
SYN3-208ENST00000467095 CDC42BPBQ9Y5S2 1711 aa11.21□□□□□ -0.61
SYN3-208ENST00000467095 TIAM1Q13009 1591 aa11.21□□□□□ -0.61
SYN3-208ENST00000467095 WDR7Q9Y4E6 1490 aa11.21□□□□□ -0.61
SYN3-208ENST00000467095 TTC37Q6PGP7 1564 aa11.2□□□□□ -0.62
SYN3-208ENST00000467095 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYN3-208ENST00000467095 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
SYN3-208ENST00000467095 MYO5CQ9NQX4 1742 aa11.18□□□□□ -0.62
SYN3-208ENST00000467095 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
SYN3-208ENST00000467095 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
SYN3-208ENST00000467095 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
SYN3-208ENST00000467095 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
SYN3-208ENST00000467095 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
SYN3-208ENST00000467095 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
SYN3-208ENST00000467095 TROQ12816 1431 aaPredicted RBP11.13□□□□□ -0.63
SYN3-208ENST00000467095 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
SYN3-208ENST00000467095 EHBP1L1Q8N3D4 1523 aa11.12□□□□□ -0.63
SYN3-208ENST00000467095 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
SYN3-208ENST00000467095 KCNH8Q96L42 1107 aa11.11□□□□□ -0.63
SYN3-208ENST00000467095 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
SYN3-208ENST00000467095 KANK4Q5T7N3 995 aaPredicted RBP11.1□□□□□ -0.63
SYN3-208ENST00000467095 PLEKHD1A6NEE1 506 aa11.09□□□□□ -0.63
SYN3-208ENST00000467095 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
SYN3-208ENST00000467095 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
SYN3-208ENST00000467095 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
SYN3-208ENST00000467095 CD109Q6YHK3 1445 aa11.07□□□□□ -0.64
SYN3-208ENST00000467095 COL17A1Q9UMD9 1497 aaPredicted RBP11.06□□□□□ -0.64
SYN3-208ENST00000467095 FRMPD1Q5SYB0 1578 aa11.06□□□□□ -0.64
SYN3-208ENST00000467095 SAMD9LQ8IVG5 1584 aa11.06□□□□□ -0.64
SYN3-208ENST00000467095 ARAP3Q8WWN8 1544 aa11.05□□□□□ -0.64
SYN3-208ENST00000467095 NCOA2Q15596 1464 aa11.05□□□□□ -0.64
SYN3-208ENST00000467095 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
SYN3-208ENST00000467095 CFAP74Q9C0B2 1584 aa11.04□□□□□ -0.64
SYN3-208ENST00000467095 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
SYN3-208ENST00000467095 PLCH2O75038 1416 aa11.03□□□□□ -0.64
SYN3-208ENST00000467095 KDM6BO15054 1643 aa11.03□□□□□ -0.64
SYN3-208ENST00000467095 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
SYN3-208ENST00000467095 SIGLEC1Q9BZZ2 1709 aa11.01□□□□□ -0.65
SYN3-208ENST00000467095 ARHGEF12Q9NZN5 1544 aa11.01□□□□□ -0.65
SYN3-208ENST00000467095 FANCAO15360 1455 aa11□□□□□ -0.65
SYN3-208ENST00000467095 ARHGAP5Q13017 1502 aa11□□□□□ -0.65
SYN3-208ENST00000467095 TEX14Q8IWB6 1497 aa11□□□□□ -0.65
SYN3-208ENST00000467095 NEO1Q92859 1461 aa11□□□□□ -0.65
SYN3-208ENST00000467095 ABCC1P33527 1531 aa10.99□□□□□ -0.65
SYN3-208ENST00000467095 PPARGC1BQ86YN6 1023 aaKnown RBP10.99□□□□□ -0.65
SYN3-208ENST00000467095 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
SYN3-208ENST00000467095 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
SYN3-208ENST00000467095 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
SYN3-208ENST00000467095 AKNAQ7Z591 1439 aa10.98□□□□□ -0.65
SYN3-208ENST00000467095 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
SYN3-208ENST00000467095 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
SYN3-208ENST00000467095 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
SYN3-208ENST00000467095 SYCP2Q9BX26 1530 aa10.96□□□□□ -0.65
SYN3-208ENST00000467095 KDM5CP41229 1560 aa10.95□□□□□ -0.66
SYN3-208ENST00000467095 MYOM3Q5VTT5 1437 aa10.95□□□□□ -0.66
SYN3-208ENST00000467095 ZNF644Q9H582 1327 aaPredicted RBP10.95□□□□□ -0.66
SYN3-208ENST00000467095 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
SYN3-208ENST00000467095 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
SYN3-208ENST00000467095 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
SYN3-208ENST00000467095 CCNB3Q8WWL7 1395 aa10.94□□□□□ -0.66
SYN3-208ENST00000467095 ZMYM4Q5VZL5 1548 aa10.94□□□□□ -0.66
SYN3-208ENST00000467095 MBD5Q9P267 1494 aa10.93□□□□□ -0.66
SYN3-208ENST00000467095 ABCA6Q8N139 1617 aa10.93□□□□□ -0.66
SYN3-208ENST00000467095 ARHGEF5Q12774 1597 aa10.93□□□□□ -0.66
SYN3-208ENST00000467095 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
SYN3-208ENST00000467095 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
SYN3-208ENST00000467095 DNMT1P26358 1616 aaKnown RBP10.92□□□□□ -0.66
SYN3-208ENST00000467095 INO80Q9ULG1 1556 aaPredicted RBP10.92□□□□□ -0.66
SYN3-208ENST00000467095 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
SYN3-208ENST00000467095 SCAPERQ9BY12 1400 aa10.92□□□□□ -0.66
SYN3-208ENST00000467095 HECW2Q9P2P5 1572 aa10.91□□□□□ -0.66
SYN3-208ENST00000467095 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
SYN3-208ENST00000467095 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
SYN3-208ENST00000467095 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
SYN3-208ENST00000467095 EFCAB2Q5VUJ9 269 aa10.91□□□□□ -0.66
SYN3-208ENST00000467095 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
SYN3-208ENST00000467095 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
SYN3-208ENST00000467095 DENND4BO75064 1496 aaPredicted RBP10.9□□□□□ -0.66
SYN3-208ENST00000467095 RAPGEF3O95398 923 aa10.9□□□□□ -0.66
SYN3-208ENST00000467095 MIA2Q96PC5 1412 aa10.9□□□□□ -0.66
SYN3-208ENST00000467095 CFDP1Q9UEE9 299 aaPredicted RBP10.89□□□□□ -0.67
SYN3-208ENST00000467095 DIP2CQ9Y2E4 1556 aa10.89□□□□□ -0.67
SYN3-208ENST00000467095 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
SYN3-208ENST00000467095 HNRNPMP52272 730 aaKnown RBP eCLIP10.88□□□□□ -0.67
SYN3-208ENST00000467095 KIAA1107Q9UPP5 1409 aa10.88□□□□□ -0.67
SYN3-208ENST00000467095 MAST1Q9Y2H9 1570 aa10.88□□□□□ -0.67
SYN3-208ENST00000467095 ZFYVE16Q7Z3T8 1539 aa10.88□□□□□ -0.67
SYN3-208ENST00000467095 ARHGEF40Q8TER5 1519 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms