RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 PREX2Q70Z35 1606 aa12.35□□□□□ -0.43
COPS7B-218ENST00000466901 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
COPS7B-218ENST00000466901 RICTORQ6R327 1708 aa12.34□□□□□ -0.43
COPS7B-218ENST00000466901 EHBP1L1Q8N3D4 1523 aa12.34□□□□□ -0.43
COPS7B-218ENST00000466901 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
COPS7B-218ENST00000466901 FRMPD1Q5SYB0 1578 aa12.34□□□□□ -0.43
COPS7B-218ENST00000466901 CCNB3Q8WWL7 1395 aa12.33□□□□□ -0.44
COPS7B-218ENST00000466901 APLP2Q06481 763 aa12.33□□□□□ -0.44
COPS7B-218ENST00000466901 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
COPS7B-218ENST00000466901 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
COPS7B-218ENST00000466901 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
COPS7B-218ENST00000466901 KDM4FA0A1W2PPD8 638 aa12.31□□□□□ -0.44
COPS7B-218ENST00000466901 CFDP1Q9UEE9 299 aaPredicted RBP12.31□□□□□ -0.44
COPS7B-218ENST00000466901 SUPT6HQ7KZ85 1726 aaKnown RBP12.3□□□□□ -0.44
COPS7B-218ENST00000466901 MAP3K1Q13233 1512 aa12.3□□□□□ -0.44
COPS7B-218ENST00000466901 ZNF518AQ6AHZ1 1483 aa12.29□□□□□ -0.44
COPS7B-218ENST00000466901 LRRC9Q6ZRR7 1453 aa12.29□□□□□ -0.44
COPS7B-218ENST00000466901 MAGI2Q86UL8 1455 aa12.29□□□□□ -0.44
COPS7B-218ENST00000466901 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
COPS7B-218ENST00000466901 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
COPS7B-218ENST00000466901 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
COPS7B-218ENST00000466901 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
COPS7B-218ENST00000466901 ABCC1P33527 1531 aa12.27□□□□□ -0.44
COPS7B-218ENST00000466901 ITSN2Q9NZM3 1697 aa12.27□□□□□ -0.45
COPS7B-218ENST00000466901 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.45
COPS7B-218ENST00000466901 ARID4BQ4LE39 1312 aaPredicted RBP12.27□□□□□ -0.45
COPS7B-218ENST00000466901 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.45
COPS7B-218ENST00000466901 ARHGEF40Q8TER5 1519 aa12.27□□□□□ -0.45
COPS7B-218ENST00000466901 PLEKHH2Q8IVE3 1493 aa12.26□□□□□ -0.45
COPS7B-218ENST00000466901 ARHGEF12Q9NZN5 1544 aa12.26□□□□□ -0.45
COPS7B-218ENST00000466901 SAMD9LQ8IVG5 1584 aa12.26□□□□□ -0.45
COPS7B-218ENST00000466901 HNRNPMP52272 730 aaKnown RBP eCLIP12.25□□□□□ -0.454e-7■■■■□ 20.7
COPS7B-218ENST00000466901 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
COPS7B-218ENST00000466901 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
COPS7B-218ENST00000466901 KDM5CP41229 1560 aa12.25□□□□□ -0.45
COPS7B-218ENST00000466901 KIAA1107Q9UPP5 1409 aa12.24□□□□□ -0.45
COPS7B-218ENST00000466901 HECW2Q9P2P5 1572 aa12.23□□□□□ -0.45
COPS7B-218ENST00000466901 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
COPS7B-218ENST00000466901 ATP10AO60312 1499 aa12.22□□□□□ -0.45
COPS7B-218ENST00000466901 ZNF644Q9H582 1327 aaPredicted RBP12.22□□□□□ -0.45
COPS7B-218ENST00000466901 MLH3Q9UHC1 1453 aa12.21□□□□□ -0.45
COPS7B-218ENST00000466901 SPAG9O60271 1321 aaKnown RBP12.21□□□□□ -0.45
COPS7B-218ENST00000466901 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
COPS7B-218ENST00000466901 BCORL1Q5H9F3 1711 aa12.19□□□□□ -0.46
COPS7B-218ENST00000466901 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
COPS7B-218ENST00000466901 RSPH4AQ5TD94 716 aa12.18□□□□□ -0.46
COPS7B-218ENST00000466901 CAMSAP2Q08AD1 1489 aa12.18□□□□□ -0.46
COPS7B-218ENST00000466901 MYOM3Q5VTT5 1437 aa12.18□□□□□ -0.46
COPS7B-218ENST00000466901 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
COPS7B-218ENST00000466901 ADAMTSL3P82987 1691 aa12.17□□□□□ -0.46
COPS7B-218ENST00000466901 MBD5Q9P267 1494 aa12.17□□□□□ -0.46
COPS7B-218ENST00000466901 MLECQ14165 292 aa12.17□□□□□ -0.46
COPS7B-218ENST00000466901 SIGLEC1Q9BZZ2 1709 aa12.17□□□□□ -0.46
COPS7B-218ENST00000466901 ABCA6Q8N139 1617 aa12.16□□□□□ -0.46
COPS7B-218ENST00000466901 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
COPS7B-218ENST00000466901 ATP7AQ04656 1500 aa12.15□□□□□ -0.46
COPS7B-218ENST00000466901 REREQ9P2R6 1566 aa12.14□□□□□ -0.47
COPS7B-218ENST00000466901 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
COPS7B-218ENST00000466901 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
COPS7B-218ENST00000466901 MADDQ8WXG6 1647 aa12.14□□□□□ -0.47
COPS7B-218ENST00000466901 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
COPS7B-218ENST00000466901 INO80Q9ULG1 1556 aaPredicted RBP12.13□□□□□ -0.47
COPS7B-218ENST00000466901 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
COPS7B-218ENST00000466901 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
COPS7B-218ENST00000466901 PTPRMP28827 1452 aa12.12□□□□□ -0.47
COPS7B-218ENST00000466901 RIMS1Q86UR5 1692 aaKnown RBP12.11□□□□□ -0.47
COPS7B-218ENST00000466901 AGLP35573 1532 aa12.11□□□□□ -0.47
COPS7B-218ENST00000466901 FER1L4A9Z1Z3 1794 aa12.1□□□□□ -0.47
COPS7B-218ENST00000466901 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
COPS7B-218ENST00000466901 A2MP01023 1474 aa12.1□□□□□ -0.47
COPS7B-218ENST00000466901 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
COPS7B-218ENST00000466901 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
COPS7B-218ENST00000466901 FGD6Q6ZV73 1430 aa12.1□□□□□ -0.47
COPS7B-218ENST00000466901 PLPPR3Q6T4P5 718 aa12.08□□□□□ -0.48
COPS7B-218ENST00000466901 DHX29Q7Z478 1369 aaKnown RBP12.07□□□□□ -0.48
COPS7B-218ENST00000466901 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
COPS7B-218ENST00000466901 PLXNC1O60486 1568 aa12.06□□□□□ -0.48
COPS7B-218ENST00000466901 FAM50AQ14320 339 aaKnown RBP12.06□□□□□ -0.48
COPS7B-218ENST00000466901 TCOF1Q13428 1488 aaKnown RBP12.06□□□□□ -0.48
COPS7B-218ENST00000466901 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
COPS7B-218ENST00000466901 GGT6Q6P531 493 aa12.05□□□□□ -0.48
COPS7B-218ENST00000466901 ABCC5O15440 1437 aa12.03□□□□□ -0.48
COPS7B-218ENST00000466901 KIF3BO15066 747 aa12.03□□□□□ -0.48
COPS7B-218ENST00000466901 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
COPS7B-218ENST00000466901 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
COPS7B-218ENST00000466901 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
COPS7B-218ENST00000466901 DAPK1P53355 1430 aa12.03□□□□□ -0.48
COPS7B-218ENST00000466901 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
COPS7B-218ENST00000466901 SHANK2Q9UPX8 1470 aa12.02□□□□□ -0.48
COPS7B-218ENST00000466901 CROCC2H7BZ55 1655 aa12.02□□□□□ -0.49
COPS7B-218ENST00000466901 CHIC2Q9UKJ5 165 aa12.01□□□□□ -0.49
COPS7B-218ENST00000466901 SETD1BQ9UPS6 1966 aaKnown RBP12□□□□□ -0.49
COPS7B-218ENST00000466901 RRP7BPQ9NSQ0 103 aa12□□□□□ -0.49
COPS7B-218ENST00000466901 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
COPS7B-218ENST00000466901 KIF15Q9NS87 1388 aa11.99□□□□□ -0.49
COPS7B-218ENST00000466901 DUOX2Q9NRD8 1548 aa11.99□□□□□ -0.49
COPS7B-218ENST00000466901 C3P01024 1663 aa11.99□□□□□ -0.49
COPS7B-218ENST00000466901 CLTCQ00610 1675 aaKnown RBP11.99□□□□□ -0.49
COPS7B-218ENST00000466901 MROH2AA6NES4 1674 aa11.98□□□□□ -0.49
COPS7B-218ENST00000466901 ZMYM3Q14202 1370 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms