RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-204ENST00000466822 CCNB3Q8WWL7 1395 aa22.68■■□□□ 1.22
ABCD4-204ENST00000466822 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
ABCD4-204ENST00000466822 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
ABCD4-204ENST00000466822 CFDP1Q9UEE9 299 aaPredicted RBP22.66■■□□□ 1.22
ABCD4-204ENST00000466822 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
ABCD4-204ENST00000466822 GPATCH8Q9UKJ3 1502 aaKnown RBP22.65■■□□□ 1.22
ABCD4-204ENST00000466822 POGZQ7Z3K3 1410 aa22.63■■□□□ 1.21
ABCD4-204ENST00000466822 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
ABCD4-204ENST00000466822 ZNF518AQ6AHZ1 1483 aa22.61■■□□□ 1.21
ABCD4-204ENST00000466822 PREX2Q70Z35 1606 aa22.61■■□□□ 1.21
ABCD4-204ENST00000466822 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
ABCD4-204ENST00000466822 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
ABCD4-204ENST00000466822 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
ABCD4-204ENST00000466822 KIAA1107Q9UPP5 1409 aa22.58■■□□□ 1.21
ABCD4-204ENST00000466822 FRMPD1Q5SYB0 1578 aa22.58■■□□□ 1.2
ABCD4-204ENST00000466822 RICTORQ6R327 1708 aa22.57■■□□□ 1.2
ABCD4-204ENST00000466822 CDC42BPBQ9Y5S2 1711 aa22.57■■□□□ 1.2
ABCD4-204ENST00000466822 KDM4FA0A1W2PPD8 638 aa22.57■■□□□ 1.2
ABCD4-204ENST00000466822 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
ABCD4-204ENST00000466822 AFAP1Q8N556 730 aa22.56■■□□□ 1.2
ABCD4-204ENST00000466822 RSPH4AQ5TD94 716 aa22.55■■□□□ 1.2
ABCD4-204ENST00000466822 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
ABCD4-204ENST00000466822 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
ABCD4-204ENST00000466822 SUPT6HQ7KZ85 1726 aaKnown RBP22.53■■□□□ 1.2
ABCD4-204ENST00000466822 KANK4Q5T7N3 995 aaPredicted RBP22.52■■□□□ 1.2
ABCD4-204ENST00000466822 MLH3Q9UHC1 1453 aa22.52■■□□□ 1.2
ABCD4-204ENST00000466822 ABCC1P33527 1531 aa22.52■■□□□ 1.19
ABCD4-204ENST00000466822 ZFYVE16Q7Z3T8 1539 aa22.51■■□□□ 1.19
ABCD4-204ENST00000466822 KDM5CP41229 1560 aa22.5■■□□□ 1.19
ABCD4-204ENST00000466822 MYT1LQ9UL68 1186 aa22.49■■□□□ 1.19
ABCD4-204ENST00000466822 ARID4BQ4LE39 1312 aaPredicted RBP22.49■■□□□ 1.19
ABCD4-204ENST00000466822 TRAPPC8Q9Y2L5 1435 aa22.48■■□□□ 1.19
ABCD4-204ENST00000466822 ATP10AO60312 1499 aa22.48■■□□□ 1.19
ABCD4-204ENST00000466822 ARHGEF40Q8TER5 1519 aa22.48■■□□□ 1.19
ABCD4-204ENST00000466822 HNRNPMP52272 730 aaKnown RBP eCLIP22.48■■□□□ 1.19
ABCD4-204ENST00000466822 ITSN2Q9NZM3 1697 aa22.48■■□□□ 1.19
ABCD4-204ENST00000466822 ARHGEF12Q9NZN5 1544 aa22.47■■□□□ 1.19
ABCD4-204ENST00000466822 YEATS2Q9ULM3 1422 aa22.46■■□□□ 1.19
ABCD4-204ENST00000466822 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
ABCD4-204ENST00000466822 MIA2Q96PC5 1412 aa22.45■■□□□ 1.18
ABCD4-204ENST00000466822 SAMD9LQ8IVG5 1584 aa22.45■■□□□ 1.18
ABCD4-204ENST00000466822 C9orf84Q5VXU9 1444 aa22.43■■□□□ 1.18
ABCD4-204ENST00000466822 ZNF644Q9H582 1327 aaPredicted RBP22.41■■□□□ 1.18
ABCD4-204ENST00000466822 HECW2Q9P2P5 1572 aa22.41■■□□□ 1.18
ABCD4-204ENST00000466822 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
ABCD4-204ENST00000466822 SYCP2Q9BX26 1530 aa22.4■■□□□ 1.18
ABCD4-204ENST00000466822 MBD5Q9P267 1494 aa22.39■■□□□ 1.17
ABCD4-204ENST00000466822 RTEL1-TNFRSF6BF6WH68 1400 aa22.39■■□□□ 1.17
ABCD4-204ENST00000466822 TSPY4P0CV99 314 aa22.37■■□□□ 1.17
ABCD4-204ENST00000466822 TSPY10P0CW01 314 aa22.37■■□□□ 1.17
ABCD4-204ENST00000466822 REREQ9P2R6 1566 aa22.37■■□□□ 1.17
ABCD4-204ENST00000466822 CAMSAP2Q08AD1 1489 aa22.34■■□□□ 1.17
ABCD4-204ENST00000466822 CCDC141Q6ZP82 1450 aa22.33■■□□□ 1.16
ABCD4-204ENST00000466822 AGLP35573 1532 aa22.31■■□□□ 1.16
ABCD4-204ENST00000466822 DIP2CQ9Y2E4 1556 aa22.31■■□□□ 1.16
ABCD4-204ENST00000466822 BCORL1Q5H9F3 1711 aa22.31■■□□□ 1.16
ABCD4-204ENST00000466822 ADAMTSL3P82987 1691 aa22.3■■□□□ 1.16
ABCD4-204ENST00000466822 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
ABCD4-204ENST00000466822 KIDINS220Q9ULH0 1771 aa22.29■■□□□ 1.16
ABCD4-204ENST00000466822 ARHGEF5Q12774 1597 aa22.29■■□□□ 1.16
ABCD4-204ENST00000466822 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
ABCD4-204ENST00000466822 MLECQ14165 292 aa22.26■■□□□ 1.15
ABCD4-204ENST00000466822 ABCA6Q8N139 1617 aa22.25■■□□□ 1.15
ABCD4-204ENST00000466822 A2MP01023 1474 aa22.25■■□□□ 1.15
ABCD4-204ENST00000466822 PTPRMP28827 1452 aa22.25■■□□□ 1.15
ABCD4-204ENST00000466822 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
ABCD4-204ENST00000466822 FGD6Q6ZV73 1430 aa22.24■■□□□ 1.15
ABCD4-204ENST00000466822 ESF1Q9H501 851 aaKnown RBP22.24■■□□□ 1.15
ABCD4-204ENST00000466822 DHX29Q7Z478 1369 aaKnown RBP22.24■■□□□ 1.15
ABCD4-204ENST00000466822 TCOF1Q13428 1488 aaKnown RBP22.21■■□□□ 1.15
ABCD4-204ENST00000466822 CNTLNQ9NXG0 1405 aa22.18■■□□□ 1.14
ABCD4-204ENST00000466822 MADDQ8WXG6 1647 aa22.17■■□□□ 1.14
ABCD4-204ENST00000466822 PTPN23Q9H3S7 1636 aa22.17■■□□□ 1.14
ABCD4-204ENST00000466822 MAST1Q9Y2H9 1570 aa22.16■■□□□ 1.14
ABCD4-204ENST00000466822 PLXNC1O60486 1568 aa22.16■■□□□ 1.14
ABCD4-204ENST00000466822 SIGLEC1Q9BZZ2 1709 aa22.15■■□□□ 1.14
ABCD4-204ENST00000466822 ADGBQ8N7X0 1667 aa22.15■■□□□ 1.14
ABCD4-204ENST00000466822 SHANK2Q9UPX8 1470 aa22.15■■□□□ 1.14
ABCD4-204ENST00000466822 ABCC5O15440 1437 aa22.14■■□□□ 1.13
ABCD4-204ENST00000466822 GGT6Q6P531 493 aa22.12■■□□□ 1.13
ABCD4-204ENST00000466822 DAPK1P53355 1430 aa22.11■■□□□ 1.13
ABCD4-204ENST00000466822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.11■■□□□ 1.13
ABCD4-204ENST00000466822 KIF3BO15066 747 aa22.1■■□□□ 1.13
ABCD4-204ENST00000466822 FAM50AQ14320 339 aaKnown RBP22.1■■□□□ 1.13
ABCD4-204ENST00000466822 RIMS1Q86UR5 1692 aaKnown RBP22.09■■□□□ 1.13
ABCD4-204ENST00000466822 FER1L4A9Z1Z3 1794 aa22.08■■□□□ 1.13
ABCD4-204ENST00000466822 ANKRD30AQ9BXX3 1397 aa22.08■■□□□ 1.12
ABCD4-204ENST00000466822 DNMT1P26358 1616 aaKnown RBP22.06■■□□□ 1.12
ABCD4-204ENST00000466822 FAM135AQ9P2D6 1515 aa22.06■■□□□ 1.12
ABCD4-204ENST00000466822 DUOX2Q9NRD8 1548 aa22.05■■□□□ 1.12
ABCD4-204ENST00000466822 ZMYM3Q14202 1370 aa22.04■■□□□ 1.12
ABCD4-204ENST00000466822 KIF15Q9NS87 1388 aa22.04■■□□□ 1.12
ABCD4-204ENST00000466822 CEBPAP49715 358 aaPredicted RBP22.02■■□□□ 1.12
ABCD4-204ENST00000466822 RRP7BPQ9NSQ0 103 aa22.02■■□□□ 1.12
ABCD4-204ENST00000466822 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
ABCD4-204ENST00000466822 ERBINQ96RT1 1412 aa22.01■■□□□ 1.11
ABCD4-204ENST00000466822 WASHC2CQ9Y4E1 1318 aa22.01■■□□□ 1.11
ABCD4-204ENST00000466822 SETD1BQ9UPS6 1966 aaKnown RBP22■■□□□ 1.11
ABCD4-204ENST00000466822 NPATQ14207 1427 aa21.99■■□□□ 1.11
ABCD4-204ENST00000466822 ADGRL2O95490 1459 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms