RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 PLCH2O75038 1416 aa22.82■■□□□ 1.24
SNED1-208ENST00000466618 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
SNED1-208ENST00000466618 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
SNED1-208ENST00000466618 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
SNED1-208ENST00000466618 ARAP3Q8WWN8 1544 aa22.78■■□□□ 1.24
SNED1-208ENST00000466618 KIF13AQ9H1H9 1805 aa22.77■■□□□ 1.24
SNED1-208ENST00000466618 MIA2Q96PC5 1412 aa22.77■■□□□ 1.24
SNED1-208ENST00000466618 CDC42BPAQ5VT25 1732 aa22.76■■□□□ 1.23
SNED1-208ENST00000466618 PREX2Q70Z35 1606 aa22.76■■□□□ 1.23
SNED1-208ENST00000466618 FGD6Q6ZV73 1430 aa22.75■■□□□ 1.23
SNED1-208ENST00000466618 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
SNED1-208ENST00000466618 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
SNED1-208ENST00000466618 ITSN2Q9NZM3 1697 aa22.73■■□□□ 1.23
SNED1-208ENST00000466618 RRBP1Q9P2E9 1410 aaKnown RBP22.73■■□□□ 1.23
SNED1-208ENST00000466618 CDC42BPBQ9Y5S2 1711 aa22.72■■□□□ 1.23
SNED1-208ENST00000466618 TRHP20396 242 aaPredicted RBP22.71■■□□□ 1.23
SNED1-208ENST00000466618 ARHGAP5Q13017 1502 aa22.71■■□□□ 1.23
SNED1-208ENST00000466618 EFCAB2Q5VUJ9 269 aa22.7■■□□□ 1.23
SNED1-208ENST00000466618 FANCAO15360 1455 aa22.7■■□□□ 1.22
SNED1-208ENST00000466618 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
SNED1-208ENST00000466618 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
SNED1-208ENST00000466618 ZNF644Q9H582 1327 aaPredicted RBP22.68■■□□□ 1.22
SNED1-208ENST00000466618 YTHDC1Q96MU7 727 aaKnown RBP22.67■■□□□ 1.22
SNED1-208ENST00000466618 PPRC1Q5VV67 1664 aaKnown RBP22.67■■□□□ 1.22
SNED1-208ENST00000466618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
SNED1-208ENST00000466618 NEO1Q92859 1461 aa22.65■■□□□ 1.22
SNED1-208ENST00000466618 PTPN23Q9H3S7 1636 aa22.65■■□□□ 1.22
SNED1-208ENST00000466618 SAMD9LQ8IVG5 1584 aa22.65■■□□□ 1.22
SNED1-208ENST00000466618 ZNF777Q9ULD5 760 aaPredicted RBP22.65■■□□□ 1.22
SNED1-208ENST00000466618 CAMSAP2Q08AD1 1489 aa22.64■■□□□ 1.21
SNED1-208ENST00000466618 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.21
SNED1-208ENST00000466618 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
SNED1-208ENST00000466618 KIAA1107Q9UPP5 1409 aa22.62■■□□□ 1.21
SNED1-208ENST00000466618 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
SNED1-208ENST00000466618 CFAP74Q9C0B2 1584 aa22.6■■□□□ 1.21
SNED1-208ENST00000466618 MBD5Q9P267 1494 aa22.59■■□□□ 1.21
SNED1-208ENST00000466618 ARHGEF12Q9NZN5 1544 aa22.59■■□□□ 1.21
SNED1-208ENST00000466618 ABCC1P33527 1531 aa22.59■■□□□ 1.21
SNED1-208ENST00000466618 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
SNED1-208ENST00000466618 ADGRL1O94910 1474 aa22.57■■□□□ 1.2
SNED1-208ENST00000466618 TSPOAP1O95153 1857 aa22.57■■□□□ 1.2
SNED1-208ENST00000466618 HNRNPMP52272 730 aaKnown RBP eCLIP22.56■■□□□ 1.2
SNED1-208ENST00000466618 SCAPERQ9BY12 1400 aa22.55■■□□□ 1.2
SNED1-208ENST00000466618 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
SNED1-208ENST00000466618 MIER1Q8N108 512 aa22.54■■□□□ 1.2
SNED1-208ENST00000466618 ARHGEF5Q12774 1597 aa22.52■■□□□ 1.2
SNED1-208ENST00000466618 RSPH4AQ5TD94 716 aa22.52■■□□□ 1.2
SNED1-208ENST00000466618 ABCC5O15440 1437 aa22.52■■□□□ 1.2
SNED1-208ENST00000466618 TRAPPC8Q9Y2L5 1435 aa22.52■■□□□ 1.2
SNED1-208ENST00000466618 DAPK1P53355 1430 aa22.5■■□□□ 1.19
SNED1-208ENST00000466618 COL17A1Q9UMD9 1497 aaPredicted RBP22.49■■□□□ 1.19
SNED1-208ENST00000466618 DENND4BO75064 1496 aaPredicted RBP22.49■■□□□ 1.19
SNED1-208ENST00000466618 CCDC141Q6ZP82 1450 aa22.49■■□□□ 1.19
SNED1-208ENST00000466618 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
SNED1-208ENST00000466618 PTPRKQ15262 1439 aa22.49■■□□□ 1.19
SNED1-208ENST00000466618 POGZQ7Z3K3 1410 aa22.49■■□□□ 1.19
SNED1-208ENST00000466618 AFAP1Q8N556 730 aa22.48■■□□□ 1.19
SNED1-208ENST00000466618 ZNF518AQ6AHZ1 1483 aa22.46■■□□□ 1.19
SNED1-208ENST00000466618 RAPGEF3O95398 923 aa22.45■■□□□ 1.18
SNED1-208ENST00000466618 SHANK2Q9UPX8 1470 aa22.43■■□□□ 1.18
SNED1-208ENST00000466618 ITGAEP38570 1179 aa22.43■■□□□ 1.18
SNED1-208ENST00000466618 KDM5CP41229 1560 aa22.43■■□□□ 1.18
SNED1-208ENST00000466618 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
SNED1-208ENST00000466618 TSPY4P0CV99 314 aa22.42■■□□□ 1.18
SNED1-208ENST00000466618 TSPY10P0CW01 314 aa22.42■■□□□ 1.18
SNED1-208ENST00000466618 RICTORQ6R327 1708 aa22.41■■□□□ 1.18
SNED1-208ENST00000466618 C9orf84Q5VXU9 1444 aa22.4■■□□□ 1.18
SNED1-208ENST00000466618 CROCC2H7BZ55 1655 aa22.4■■□□□ 1.18
SNED1-208ENST00000466618 MAST1Q9Y2H9 1570 aa22.39■■□□□ 1.17
SNED1-208ENST00000466618 RTEL1-TNFRSF6BF6WH68 1400 aa22.39■■□□□ 1.17
SNED1-208ENST00000466618 SPAG9O60271 1321 aaKnown RBP22.38■■□□□ 1.17
SNED1-208ENST00000466618 MLH3Q9UHC1 1453 aa22.38■■□□□ 1.17
SNED1-208ENST00000466618 ADGRL2O95490 1459 aa22.37■■□□□ 1.17
SNED1-208ENST00000466618 CHIC2Q9UKJ5 165 aa22.37■■□□□ 1.17
SNED1-208ENST00000466618 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
SNED1-208ENST00000466618 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
SNED1-208ENST00000466618 ZFYVE16Q7Z3T8 1539 aa22.35■■□□□ 1.17
SNED1-208ENST00000466618 NCOA1Q15788 1441 aa22.35■■□□□ 1.17
SNED1-208ENST00000466618 INO80Q9ULG1 1556 aaPredicted RBP22.35■■□□□ 1.17
SNED1-208ENST00000466618 KDM6BO15054 1643 aa22.34■■□□□ 1.17
SNED1-208ENST00000466618 ATP7AQ04656 1500 aa22.32■■□□□ 1.16
SNED1-208ENST00000466618 MAGI2Q86UL8 1455 aa22.32■■□□□ 1.16
SNED1-208ENST00000466618 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
SNED1-208ENST00000466618 HECW2Q9P2P5 1572 aa22.31■■□□□ 1.16
SNED1-208ENST00000466618 KIDINS220Q9ULH0 1771 aa22.3■■□□□ 1.16
SNED1-208ENST00000466618 ANP32EQ9BTT0 268 aa22.3■■□□□ 1.16
SNED1-208ENST00000466618 BCL11AQ9H165 835 aa22.3■■□□□ 1.16
SNED1-208ENST00000466618 PLXNC1O60486 1568 aa22.29■■□□□ 1.16
SNED1-208ENST00000466618 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
SNED1-208ENST00000466618 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
SNED1-208ENST00000466618 HFM1A2PYH4 1435 aa22.28■■□□□ 1.16
SNED1-208ENST00000466618 YEATS2Q9ULM3 1422 aa22.28■■□□□ 1.16
SNED1-208ENST00000466618 RRP7BPQ9NSQ0 103 aa22.28■■□□□ 1.16
SNED1-208ENST00000466618 ADGBQ8N7X0 1667 aa22.27■■□□□ 1.16
SNED1-208ENST00000466618 NAIPQ13075 1403 aa22.27■■□□□ 1.15
SNED1-208ENST00000466618 KIF15Q9NS87 1388 aa22.26■■□□□ 1.15
SNED1-208ENST00000466618 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
SNED1-208ENST00000466618 ABCA6Q8N139 1617 aa22.23■■□□□ 1.15
SNED1-208ENST00000466618 DIP2CQ9Y2E4 1556 aa22.23■■□□□ 1.15
SNED1-208ENST00000466618 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms