RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 SCAPERQ9BY12 1400 aa28.48■■■□□ 2.15
CYTH3-205ENST00000466543 MYO5CQ9NQX4 1742 aa28.48■■■□□ 2.15
CYTH3-205ENST00000466543 POGZQ7Z3K3 1410 aa28.47■■■□□ 2.15
CYTH3-205ENST00000466543 MAGI2Q86UL8 1455 aa28.43■■■□□ 2.14
CYTH3-205ENST00000466543 TROQ12816 1431 aaPredicted RBP28.43■■■□□ 2.14
CYTH3-205ENST00000466543 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
CYTH3-205ENST00000466543 PCF11O94913 1555 aaKnown RBP28.39■■■□□ 2.14
CYTH3-205ENST00000466543 CDK11AQ9UQ88 783 aaPredicted RBP28.38■■■□□ 2.13
CYTH3-205ENST00000466543 EFCAB2Q5VUJ9 269 aa28.37■■■□□ 2.13
CYTH3-205ENST00000466543 ARHGAP5Q13017 1502 aa28.33■■■□□ 2.13
CYTH3-205ENST00000466543 CDC42BPBQ9Y5S2 1711 aa28.32■■■□□ 2.12
CYTH3-205ENST00000466543 MLECQ14165 292 aa28.32■■■□□ 2.12
CYTH3-205ENST00000466543 CLIP1P30622 1438 aa28.31■■■□□ 2.12
CYTH3-205ENST00000466543 CASKIN1Q8WXD9 1431 aa28.31■■■□□ 2.12
CYTH3-205ENST00000466543 ATP10AO60312 1499 aa28.31■■■□□ 2.12
CYTH3-205ENST00000466543 FER1L4A9Z1Z3 1794 aa28.31■■■□□ 2.12
CYTH3-205ENST00000466543 PLPPR3Q6T4P5 718 aa28.3■■■□□ 2.12
CYTH3-205ENST00000466543 KDM5CP41229 1560 aa28.28■■■□□ 2.12
CYTH3-205ENST00000466543 AFAP1Q8N556 730 aa28.28■■■□□ 2.12
CYTH3-205ENST00000466543 C9orf84Q5VXU9 1444 aa28.27■■■□□ 2.12
CYTH3-205ENST00000466543 ZNF518AQ6AHZ1 1483 aa28.27■■■□□ 2.12
CYTH3-205ENST00000466543 ARHGEF12Q9NZN5 1544 aa28.26■■■□□ 2.11
CYTH3-205ENST00000466543 PREX2Q70Z35 1606 aa28.25■■■□□ 2.11
CYTH3-205ENST00000466543 CCDC18Q5T9S5 1454 aa28.25■■■□□ 2.11
CYTH3-205ENST00000466543 HSPA2P54652 639 aa28.23■■■□□ 2.11
CYTH3-205ENST00000466543 DIP2CQ9Y2E4 1556 aa28.2■■■□□ 2.11
CYTH3-205ENST00000466543 CDC42BPAQ5VT25 1732 aa28.2■■■□□ 2.1
CYTH3-205ENST00000466543 ABCC1P33527 1531 aa28.19■■■□□ 2.1
CYTH3-205ENST00000466543 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
CYTH3-205ENST00000466543 TRAPPC8Q9Y2L5 1435 aa28.18■■■□□ 2.1
CYTH3-205ENST00000466543 ABCA6Q8N139 1617 aa28.18■■■□□ 2.1
CYTH3-205ENST00000466543 ITSN2Q9NZM3 1697 aa28.16■■■□□ 2.1
CYTH3-205ENST00000466543 MLH3Q9UHC1 1453 aa28.14■■■□□ 2.09
CYTH3-205ENST00000466543 REREQ9P2R6 1566 aa28.12■■■□□ 2.09
CYTH3-205ENST00000466543 CEBPAP49715 358 aaPredicted RBP28.12■■■□□ 2.09
CYTH3-205ENST00000466543 FBXO41Q8TF61 875 aa28.1■■■□□ 2.09
CYTH3-205ENST00000466543 KIDINS220Q9ULH0 1771 aa28.09■■■□□ 2.09
CYTH3-205ENST00000466543 MYT1LQ9UL68 1186 aa28.09■■■□□ 2.09
CYTH3-205ENST00000466543 SAMD9LQ8IVG5 1584 aa28.07■■■□□ 2.08
CYTH3-205ENST00000466543 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
CYTH3-205ENST00000466543 GPATCH8Q9UKJ3 1502 aaKnown RBP28.05■■■□□ 2.08
CYTH3-205ENST00000466543 AGLP35573 1532 aa28.02■■■□□ 2.08
CYTH3-205ENST00000466543 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.07
CYTH3-205ENST00000466543 ZNF777Q9ULD5 760 aaPredicted RBP28■■■□□ 2.07
CYTH3-205ENST00000466543 C3P01024 1663 aa28■■■□□ 2.07
CYTH3-205ENST00000466543 HNRNPMP52272 730 aaKnown RBP eCLIP27.95■■■□□ 2.06
CYTH3-205ENST00000466543 STRCQ7RTU9 1775 aa27.95■■■□□ 2.06
CYTH3-205ENST00000466543 SETD1BQ9UPS6 1966 aaKnown RBP27.93■■■□□ 2.06
CYTH3-205ENST00000466543 UHRF1BP1Q6BDS2 1440 aa27.9■■■□□ 2.06
CYTH3-205ENST00000466543 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.06
CYTH3-205ENST00000466543 SPAG9O60271 1321 aaKnown RBP27.89■■■□□ 2.05
CYTH3-205ENST00000466543 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
CYTH3-205ENST00000466543 CFDP1Q9UEE9 299 aaPredicted RBP27.88■■■□□ 2.05
CYTH3-205ENST00000466543 INO80Q9ULG1 1556 aaPredicted RBP27.88■■■□□ 2.05
CYTH3-205ENST00000466543 KIAA1107Q9UPP5 1409 aa27.88■■■□□ 2.05
CYTH3-205ENST00000466543 ATP7AQ04656 1500 aa27.87■■■□□ 2.05
CYTH3-205ENST00000466543 SUPT6HQ7KZ85 1726 aaKnown RBP27.87■■■□□ 2.05
CYTH3-205ENST00000466543 TIAM1Q13009 1591 aa27.87■■■□□ 2.05
CYTH3-205ENST00000466543 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
CYTH3-205ENST00000466543 CERKQ8TCT0 537 aa27.84■■■□□ 2.05
CYTH3-205ENST00000466543 PLXNC1O60486 1568 aa27.84■■■□□ 2.05
CYTH3-205ENST00000466543 ZNF644Q9H582 1327 aaPredicted RBP27.84■■■□□ 2.05
CYTH3-205ENST00000466543 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
CYTH3-205ENST00000466543 CNTLNQ9NXG0 1405 aa27.82■■■□□ 2.04
CYTH3-205ENST00000466543 EHBP1L1Q8N3D4 1523 aa27.82■■■□□ 2.04
CYTH3-205ENST00000466543 ESF1Q9H501 851 aaKnown RBP27.81■■■□□ 2.04
CYTH3-205ENST00000466543 MROH2AA6NES4 1674 aa27.8■■■□□ 2.04
CYTH3-205ENST00000466543 A2MP01023 1474 aa27.78■■■□□ 2.04
CYTH3-205ENST00000466543 MBD5Q9P267 1494 aa27.77■■■□□ 2.04
CYTH3-205ENST00000466543 CLTCQ00610 1675 aaKnown RBP27.76■■■□□ 2.03
CYTH3-205ENST00000466543 ZMYM3Q14202 1370 aa27.74■■■□□ 2.03
CYTH3-205ENST00000466543 ADGBQ8N7X0 1667 aa27.72■■■□□ 2.03
CYTH3-205ENST00000466543 NPATQ14207 1427 aa27.71■■■□□ 2.03
CYTH3-205ENST00000466543 DMRT2Q9Y5R5 561 aa27.71■■■□□ 2.03
CYTH3-205ENST00000466543 NCOA1Q15788 1441 aa27.69■■■□□ 2.02
CYTH3-205ENST00000466543 PTPRTO14522 1441 aa27.68■■■□□ 2.02
CYTH3-205ENST00000466543 NCOA2Q15596 1464 aa27.68■■■□□ 2.02
CYTH3-205ENST00000466543 GGT6Q6P531 493 aa27.66■■■□□ 2.02
CYTH3-205ENST00000466543 CAMSAP1Q5T5Y3 1602 aa27.65■■■□□ 2.02
CYTH3-205ENST00000466543 PTPRKQ15262 1439 aa27.64■■■□□ 2.02
CYTH3-205ENST00000466543 MYO3AQ8NEV4 1616 aa27.63■■■□□ 2.01
CYTH3-205ENST00000466543 RTEL1-TNFRSF6BF6WH68 1400 aa27.63■■■□□ 2.01
CYTH3-205ENST00000466543 CAMSAP2Q08AD1 1489 aa27.63■■■□□ 2.01
CYTH3-205ENST00000466543 LOC105371045A0A1W2PR82 267 aa27.62■■■□□ 2.01
CYTH3-205ENST00000466543 LTBP4Q8N2S1 1624 aa27.61■■■□□ 2.01
CYTH3-205ENST00000466543 ZNF142P52746 1687 aaPredicted RBP27.61■■■□□ 2.01
CYTH3-205ENST00000466543 CCDC141Q6ZP82 1450 aa27.58■■■□□ 2.01
CYTH3-205ENST00000466543 DHX29Q7Z478 1369 aaKnown RBP27.58■■■□□ 2.01
CYTH3-205ENST00000466543 CEP170BQ9Y4F5 1589 aaPredicted RBP27.56■■■□□ 2
CYTH3-205ENST00000466543 NCKAP5LQ9HCH0 1330 aa27.55■■■□□ 2
CYTH3-205ENST00000466543 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
CYTH3-205ENST00000466543 PPP6R1Q9UPN7 881 aa27.53■■■□□ 2
CYTH3-205ENST00000466543 LRRC9Q6ZRR7 1453 aa27.52■■■□□ 2
CYTH3-205ENST00000466543 ARHGEF5Q12774 1597 aa27.51■■□□□ 1.99
CYTH3-205ENST00000466543 KIF3BO15066 747 aa27.5■■□□□ 1.99
CYTH3-205ENST00000466543 PLA2R1Q13018 1463 aa27.49■■□□□ 1.99
CYTH3-205ENST00000466543 TCOF1Q13428 1488 aaKnown RBP27.48■■□□□ 1.99
CYTH3-205ENST00000466543 KANK4Q5T7N3 995 aaPredicted RBP27.46■■□□□ 1.99
CYTH3-205ENST00000466543 DNMT1P26358 1616 aaKnown RBP27.45■■□□□ 1.99
CYTH3-205ENST00000466543 FBXO31Q5XUX0 539 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms