RNA–Protein interactions for RNA: ENST00000465630.1

UBR3-207, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-207ENST00000465630 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
UBR3-207ENST00000465630 ZNF710Q8N1W2 664 aa10.64□□□□□ -0.71
UBR3-207ENST00000465630 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
UBR3-207ENST00000465630 KRTAP3-3Q9BYR6 98 aa10.61□□□□□ -0.71
UBR3-207ENST00000465630 KRTAP3-2Q9BYR7 98 aa10.61□□□□□ -0.71
UBR3-207ENST00000465630 SPNS2Q8IVW8 549 aa10.59□□□□□ -0.71
UBR3-207ENST00000465630 RIMBP2O15034 1052 aa10.57□□□□□ -0.72
UBR3-207ENST00000465630 PPP1R37O75864 691 aa10.56□□□□□ -0.72
UBR3-207ENST00000465630 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
UBR3-207ENST00000465630 KIF3CO14782 793 aa10.55□□□□□ -0.72
UBR3-207ENST00000465630 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
UBR3-207ENST00000465630 C2orf72A6NCS6 295 aa10.54□□□□□ -0.72
UBR3-207ENST00000465630 ERBB3P21860 1342 aa10.54□□□□□ -0.72
UBR3-207ENST00000465630 ZSWIM6Q9HCJ5 1215 aa10.53□□□□□ -0.72
UBR3-207ENST00000465630 HS6ST3Q8IZP7 471 aa10.52□□□□□ -0.73
UBR3-207ENST00000465630 ARSIQ5FYB1 569 aa10.51□□□□□ -0.73
UBR3-207ENST00000465630 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
UBR3-207ENST00000465630 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.732e-7■■□□□ 14.4
UBR3-207ENST00000465630 CHGAP10645 457 aaKnown RBP10.48□□□□□ -0.73
UBR3-207ENST00000465630 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
UBR3-207ENST00000465630 NKX1-1Q15270 411 aaPredicted RBP10.43□□□□□ -0.74
UBR3-207ENST00000465630 ZNF687Q8N1G0 1237 aa10.4□□□□□ -0.74
UBR3-207ENST00000465630 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
UBR3-207ENST00000465630 NUDT7P0C024 238 aa10.39□□□□□ -0.75
UBR3-207ENST00000465630 PCDHGA4Q9Y5G9 962 aa10.39□□□□□ -0.75
UBR3-207ENST00000465630 SLC34A2O95436 690 aa10.38□□□□□ -0.75
UBR3-207ENST00000465630 DNAJC5Q9H3Z4 198 aa10.38□□□□□ -0.75
UBR3-207ENST00000465630 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
UBR3-207ENST00000465630 LHX6Q9UPM6 363 aa10.33□□□□□ -0.76
UBR3-207ENST00000465630 FOXK1P85037 733 aa10.32□□□□□ -0.76
UBR3-207ENST00000465630 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
UBR3-207ENST00000465630 DSG2Q14126 1118 aa10.31□□□□□ -0.76
UBR3-207ENST00000465630 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
UBR3-207ENST00000465630 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
UBR3-207ENST00000465630 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
UBR3-207ENST00000465630 LSM11P83369 360 aaKnown RBP eCLIP10.26□□□□□ -0.77
UBR3-207ENST00000465630 ANKRD13DQ6ZTN6 518 aa10.26□□□□□ -0.77
UBR3-207ENST00000465630 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
UBR3-207ENST00000465630 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
UBR3-207ENST00000465630 RYDENQ9NUL5 291 aaKnown RBP10.25□□□□□ -0.77
UBR3-207ENST00000465630 MYT1LQ9UL68 1186 aa10.25□□□□□ -0.77
UBR3-207ENST00000465630 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
UBR3-207ENST00000465630 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
UBR3-207ENST00000465630 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
UBR3-207ENST00000465630 PBX2P40425 430 aa10.21□□□□□ -0.77
UBR3-207ENST00000465630 NCKAP5LQ9HCH0 1330 aa10.21□□□□□ -0.78
UBR3-207ENST00000465630 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
UBR3-207ENST00000465630 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
UBR3-207ENST00000465630 UPF1Q92900 1129 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBR3-207ENST00000465630 PTGER2P43116 358 aa10.17□□□□□ -0.78
UBR3-207ENST00000465630 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
UBR3-207ENST00000465630 TBC1D12O60347 775 aa10.15□□□□□ -0.78
UBR3-207ENST00000465630 ARHGAP33O14559 1287 aa10.14□□□□□ -0.79
UBR3-207ENST00000465630 PDE4AP27815 886 aa10.13□□□□□ -0.79
UBR3-207ENST00000465630 PSEN2P49810 448 aa10.13□□□□□ -0.79
UBR3-207ENST00000465630 DMRTA1Q5VZB9 504 aa10.12□□□□□ -0.79
UBR3-207ENST00000465630 PPP4R3BQ5MIZ7 849 aa10.11□□□□□ -0.79
UBR3-207ENST00000465630 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
UBR3-207ENST00000465630 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
UBR3-207ENST00000465630 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
UBR3-207ENST00000465630 MFSD10Q14728 455 aa10.08□□□□□ -0.8
UBR3-207ENST00000465630 DDX27Q96GQ7 796 aaKnown RBP10.07□□□□□ -0.8
UBR3-207ENST00000465630 ZNF454Q8N9F8 522 aa10.06□□□□□ -0.8
UBR3-207ENST00000465630 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
UBR3-207ENST00000465630 HRO43593 1189 aa10.05□□□□□ -0.8
UBR3-207ENST00000465630 TK2O00142 265 aa10.04□□□□□ -0.8
UBR3-207ENST00000465630 FOSBP53539 338 aa10.04□□□□□ -0.8
UBR3-207ENST00000465630 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
UBR3-207ENST00000465630 EVI5O60447 810 aa10.02□□□□□ -0.81
UBR3-207ENST00000465630 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
UBR3-207ENST00000465630 BCL2L12Q9HB09 334 aa10□□□□□ -0.81
UBR3-207ENST00000465630 JPH4Q96JJ6 628 aa9.99□□□□□ -0.81
UBR3-207ENST00000465630 VPS9D1Q9Y2B5 631 aa9.98□□□□□ -0.81
UBR3-207ENST00000465630 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
UBR3-207ENST00000465630 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
UBR3-207ENST00000465630 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
UBR3-207ENST00000465630 ADAM33Q9BZ11 813 aa9.96□□□□□ -0.82
UBR3-207ENST00000465630 PTPREP23469 700 aa9.94□□□□□ -0.82
UBR3-207ENST00000465630 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
UBR3-207ENST00000465630 HCSTQ9UBK5 93 aa9.94□□□□□ -0.82
UBR3-207ENST00000465630 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
UBR3-207ENST00000465630 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
UBR3-207ENST00000465630 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
UBR3-207ENST00000465630 ZBED2Q9BTP6 218 aa9.92□□□□□ -0.82
UBR3-207ENST00000465630 SLC4A5Q9BY07 1137 aa9.92□□□□□ -0.82
UBR3-207ENST00000465630 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
UBR3-207ENST00000465630 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
UBR3-207ENST00000465630 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
UBR3-207ENST00000465630 DPYSL4O14531 572 aa9.89□□□□□ -0.83
UBR3-207ENST00000465630 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
UBR3-207ENST00000465630 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
UBR3-207ENST00000465630 COL9A1P20849 921 aa9.86□□□□□ -0.83
UBR3-207ENST00000465630 SPRYD3Q8NCJ5 442 aa9.86□□□□□ -0.83
UBR3-207ENST00000465630 PPP1R3GB7ZBB8 358 aa9.85□□□□□ -0.83
UBR3-207ENST00000465630 TYW1BQ6NUM6 668 aa9.85□□□□□ -0.83
UBR3-207ENST00000465630 PHF14O94880 888 aa9.84□□□□□ -0.83
UBR3-207ENST00000465630 PROX2Q3B8N5 592 aa9.83□□□□□ -0.84
UBR3-207ENST00000465630 PTPN5P54829 565 aa9.82□□□□□ -0.84
UBR3-207ENST00000465630 MRPL50Q8N5N7 158 aaKnown RBP9.82□□□□□ -0.84
UBR3-207ENST00000465630 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms