RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 RICTORQ6R327 1708 aa15.96■□□□□ 0.15
CTNNB1-211ENST00000465552 PREX2Q70Z35 1606 aa15.95■□□□□ 0.14
CTNNB1-211ENST00000465552 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
CTNNB1-211ENST00000465552 FRMPD1Q5SYB0 1578 aa15.93■□□□□ 0.14
CTNNB1-211ENST00000465552 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
CTNNB1-211ENST00000465552 FANCAO15360 1455 aa15.91■□□□□ 0.14
CTNNB1-211ENST00000465552 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
CTNNB1-211ENST00000465552 CDK11AQ9UQ88 783 aaPredicted RBP15.9■□□□□ 0.14
CTNNB1-211ENST00000465552 NEO1Q92859 1461 aa15.9■□□□□ 0.14
CTNNB1-211ENST00000465552 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
CTNNB1-211ENST00000465552 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
CTNNB1-211ENST00000465552 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
CTNNB1-211ENST00000465552 TIAM1Q13009 1591 aa15.88■□□□□ 0.13
CTNNB1-211ENST00000465552 ARAP3Q8WWN8 1544 aa15.88■□□□□ 0.13
CTNNB1-211ENST00000465552 VPS8Q8N3P4 1428 aa15.87■□□□□ 0.13
CTNNB1-211ENST00000465552 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
CTNNB1-211ENST00000465552 PLCH2O75038 1416 aa15.84■□□□□ 0.13
CTNNB1-211ENST00000465552 AKNAQ7Z591 1439 aa15.84■□□□□ 0.13
CTNNB1-211ENST00000465552 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
CTNNB1-211ENST00000465552 MTUS2Q5JR59 1369 aa15.83■□□□□ 0.12
CTNNB1-211ENST00000465552 SAMD9LQ8IVG5 1584 aa15.81■□□□□ 0.12
CTNNB1-211ENST00000465552 ARHGEF40Q8TER5 1519 aa15.8■□□□□ 0.12
CTNNB1-211ENST00000465552 SIGLEC1Q9BZZ2 1709 aa15.8■□□□□ 0.12
CTNNB1-211ENST00000465552 ABCC1P33527 1531 aa15.79■□□□□ 0.12
CTNNB1-211ENST00000465552 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
CTNNB1-211ENST00000465552 RAPGEF3O95398 923 aa15.79■□□□□ 0.12
CTNNB1-211ENST00000465552 ZMYM4Q5VZL5 1548 aa15.78■□□□□ 0.12
CTNNB1-211ENST00000465552 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
CTNNB1-211ENST00000465552 POGZQ7Z3K3 1410 aa15.76■□□□□ 0.11
CTNNB1-211ENST00000465552 SCAPERQ9BY12 1400 aa15.76■□□□□ 0.11
CTNNB1-211ENST00000465552 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
CTNNB1-211ENST00000465552 ZFYVE16Q7Z3T8 1539 aa15.75■□□□□ 0.11
CTNNB1-211ENST00000465552 SYCP2Q9BX26 1530 aa15.75■□□□□ 0.11
CTNNB1-211ENST00000465552 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
CTNNB1-211ENST00000465552 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
CTNNB1-211ENST00000465552 KDM5CP41229 1560 aa15.74■□□□□ 0.11
CTNNB1-211ENST00000465552 NCOA2Q15596 1464 aa15.73■□□□□ 0.11
CTNNB1-211ENST00000465552 LRRC9Q6ZRR7 1453 aa15.73■□□□□ 0.11
CTNNB1-211ENST00000465552 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
CTNNB1-211ENST00000465552 EFCAB2Q5VUJ9 269 aa15.73■□□□□ 0.11
CTNNB1-211ENST00000465552 BCORL1Q5H9F3 1711 aa15.72■□□□□ 0.11
CTNNB1-211ENST00000465552 ARHGEF12Q9NZN5 1544 aa15.72■□□□□ 0.11
CTNNB1-211ENST00000465552 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
CTNNB1-211ENST00000465552 KIDINS220Q9ULH0 1771 aa15.72■□□□□ 0.11
CTNNB1-211ENST00000465552 ZNF777Q9ULD5 760 aaPredicted RBP15.71■□□□□ 0.11
CTNNB1-211ENST00000465552 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.1
CTNNB1-211ENST00000465552 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
CTNNB1-211ENST00000465552 MAP3K1Q13233 1512 aa15.7■□□□□ 0.1
CTNNB1-211ENST00000465552 FER1L4A9Z1Z3 1794 aa15.7■□□□□ 0.1
CTNNB1-211ENST00000465552 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
CTNNB1-211ENST00000465552 DIP2CQ9Y2E4 1556 aa15.69■□□□□ 0.1
CTNNB1-211ENST00000465552 RIMS1Q86UR5 1692 aaKnown RBP15.68■□□□□ 0.1
CTNNB1-211ENST00000465552 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
CTNNB1-211ENST00000465552 MADDQ8WXG6 1647 aa15.68■□□□□ 0.1
CTNNB1-211ENST00000465552 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
CTNNB1-211ENST00000465552 ADAMTSL3P82987 1691 aa15.67■□□□□ 0.1
CTNNB1-211ENST00000465552 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
CTNNB1-211ENST00000465552 ADGBQ8N7X0 1667 aa15.66■□□□□ 0.1
CTNNB1-211ENST00000465552 INO80Q9ULG1 1556 aaPredicted RBP15.66■□□□□ 0.1
CTNNB1-211ENST00000465552 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
CTNNB1-211ENST00000465552 KANK4Q5T7N3 995 aaPredicted RBP15.65■□□□□ 0.1
CTNNB1-211ENST00000465552 MAGI2Q86UL8 1455 aa15.64■□□□□ 0.09
CTNNB1-211ENST00000465552 APLP2Q06481 763 aa15.63■□□□□ 0.09
CTNNB1-211ENST00000465552 CFDP1Q9UEE9 299 aaPredicted RBP15.63■□□□□ 0.09
CTNNB1-211ENST00000465552 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
CTNNB1-211ENST00000465552 CROCC2H7BZ55 1655 aa15.63■□□□□ 0.09
CTNNB1-211ENST00000465552 ATP7AQ04656 1500 aa15.63■□□□□ 0.09
CTNNB1-211ENST00000465552 AFAP1Q8N556 730 aa15.62■□□□□ 0.09
CTNNB1-211ENST00000465552 PLEKHH2Q8IVE3 1493 aa15.62■□□□□ 0.09
CTNNB1-211ENST00000465552 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
CTNNB1-211ENST00000465552 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
CTNNB1-211ENST00000465552 PTPN23Q9H3S7 1636 aa15.6■□□□□ 0.09
CTNNB1-211ENST00000465552 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
CTNNB1-211ENST00000465552 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
CTNNB1-211ENST00000465552 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
CTNNB1-211ENST00000465552 ATP10AO60312 1499 aa15.58■□□□□ 0.08
CTNNB1-211ENST00000465552 REREQ9P2R6 1566 aa15.58■□□□□ 0.08
CTNNB1-211ENST00000465552 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
CTNNB1-211ENST00000465552 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
CTNNB1-211ENST00000465552 KIAA1107Q9UPP5 1409 aa15.56■□□□□ 0.08
CTNNB1-211ENST00000465552 CCDC141Q6ZP82 1450 aa15.55■□□□□ 0.08
CTNNB1-211ENST00000465552 MBD5Q9P267 1494 aa15.55■□□□□ 0.08
CTNNB1-211ENST00000465552 MLECQ14165 292 aa15.53■□□□□ 0.08
CTNNB1-211ENST00000465552 SPAG9O60271 1321 aaKnown RBP15.52■□□□□ 0.08
CTNNB1-211ENST00000465552 PLXNC1O60486 1568 aa15.52■□□□□ 0.07
CTNNB1-211ENST00000465552 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
CTNNB1-211ENST00000465552 DNMT1P26358 1616 aaKnown RBP15.51■□□□□ 0.07
CTNNB1-211ENST00000465552 C3P01024 1663 aa15.51■□□□□ 0.07
CTNNB1-211ENST00000465552 PTPRMP28827 1452 aa15.5■□□□□ 0.07
CTNNB1-211ENST00000465552 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
CTNNB1-211ENST00000465552 MIA2Q96PC5 1412 aa15.49■□□□□ 0.07
CTNNB1-211ENST00000465552 PPARGC1BQ86YN6 1023 aaKnown RBP15.48■□□□□ 0.07
CTNNB1-211ENST00000465552 FGD6Q6ZV73 1430 aa15.48■□□□□ 0.07
CTNNB1-211ENST00000465552 AGLP35573 1532 aa15.48■□□□□ 0.07
CTNNB1-211ENST00000465552 A2MP01023 1474 aa15.46■□□□□ 0.07
CTNNB1-211ENST00000465552 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
CTNNB1-211ENST00000465552 MROH2AA6NES4 1674 aa15.46■□□□□ 0.07
CTNNB1-211ENST00000465552 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
CTNNB1-211ENST00000465552 TCOF1Q13428 1488 aaKnown RBP15.45■□□□□ 0.06
CTNNB1-211ENST00000465552 CEP152O94986 1710 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms