RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 PREX2Q70Z35 1606 aa32.73■■■□□ 2.83
ITGA4-204ENST00000465522 CDC42BPBQ9Y5S2 1711 aa32.72■■■□□ 2.83
ITGA4-204ENST00000465522 ABCA9Q8IUA7 1624 aa32.69■■■□□ 2.82
ITGA4-204ENST00000465522 PLCH2O75038 1416 aa32.69■■■□□ 2.82
ITGA4-204ENST00000465522 CAMSAP2Q08AD1 1489 aa32.68■■■□□ 2.82
ITGA4-204ENST00000465522 ARHGAP5Q13017 1502 aa32.67■■■□□ 2.82
ITGA4-204ENST00000465522 EFCAB2Q5VUJ9 269 aa32.62■■■□□ 2.81
ITGA4-204ENST00000465522 ARAP3Q8WWN8 1544 aa32.57■■■□□ 2.8
ITGA4-204ENST00000465522 PTPRKQ15262 1439 aa32.56■■■□□ 2.8
ITGA4-204ENST00000465522 SAMD9LQ8IVG5 1584 aa32.56■■■□□ 2.8
ITGA4-204ENST00000465522 CD109Q6YHK3 1445 aa32.55■■■□□ 2.8
ITGA4-204ENST00000465522 DNMT1P26358 1616 aaKnown RBP32.55■■■□□ 2.8
ITGA4-204ENST00000465522 DAPK1P53355 1430 aa32.54■■■□□ 2.8
ITGA4-204ENST00000465522 HNRNPMP52272 730 aaKnown RBP eCLIP32.53■■■□□ 2.8
ITGA4-204ENST00000465522 ABCC5O15440 1437 aa32.52■■■□□ 2.8
ITGA4-204ENST00000465522 CHIC2Q9UKJ5 165 aa32.51■■■□□ 2.8
ITGA4-204ENST00000465522 FAM69CQ0P6D2 419 aa32.51■■■□□ 2.79
ITGA4-204ENST00000465522 PLEKHH2Q8IVE3 1493 aa32.5■■■□□ 2.79
ITGA4-204ENST00000465522 GLI2P10070 1586 aa32.5■■■□□ 2.79
ITGA4-204ENST00000465522 FANCAO15360 1455 aa32.49■■■□□ 2.79
ITGA4-204ENST00000465522 RSPH4AQ5TD94 716 aa32.48■■■□□ 2.79
ITGA4-204ENST00000465522 DIP2BQ9P265 1576 aa32.47■■■□□ 2.79
ITGA4-204ENST00000465522 KIAA1107Q9UPP5 1409 aa32.46■■■□□ 2.79
ITGA4-204ENST00000465522 MBD5Q9P267 1494 aa32.46■■■□□ 2.79
ITGA4-204ENST00000465522 ARHGEF5Q12774 1597 aa32.44■■■□□ 2.78
ITGA4-204ENST00000465522 SYCP2Q9BX26 1530 aa32.44■■■□□ 2.78
ITGA4-204ENST00000465522 TSPY4P0CV99 314 aa32.43■■■□□ 2.78
ITGA4-204ENST00000465522 TSPY10P0CW01 314 aa32.43■■■□□ 2.78
ITGA4-204ENST00000465522 SETD5Q9C0A6 1442 aa32.42■■■□□ 2.78
ITGA4-204ENST00000465522 MAP3K4Q9Y6R4 1608 aa32.42■■■□□ 2.78
ITGA4-204ENST00000465522 CCDC141Q6ZP82 1450 aa32.39■■■□□ 2.78
ITGA4-204ENST00000465522 AKNAQ7Z591 1439 aa32.39■■■□□ 2.78
ITGA4-204ENST00000465522 CROCC2H7BZ55 1655 aa32.39■■■□□ 2.78
ITGA4-204ENST00000465522 RRP7BPQ9NSQ0 103 aa32.39■■■□□ 2.78
ITGA4-204ENST00000465522 ABCC1P33527 1531 aa32.39■■■□□ 2.78
ITGA4-204ENST00000465522 ARHGEF12Q9NZN5 1544 aa32.38■■■□□ 2.77
ITGA4-204ENST00000465522 HFM1A2PYH4 1435 aa32.37■■■□□ 2.77
ITGA4-204ENST00000465522 ROCK1Q13464 1354 aa32.36■■■□□ 2.77
ITGA4-204ENST00000465522 CFAP74Q9C0B2 1584 aa32.36■■■□□ 2.77
ITGA4-204ENST00000465522 RAB3GAP2Q9H2M9 1393 aa32.34■■■□□ 2.77
ITGA4-204ENST00000465522 ADGRL1O94910 1474 aa32.34■■■□□ 2.77
ITGA4-204ENST00000465522 SHANK2Q9UPX8 1470 aa32.34■■■□□ 2.77
ITGA4-204ENST00000465522 C9orf84Q5VXU9 1444 aa32.33■■■□□ 2.77
ITGA4-204ENST00000465522 NAIPQ13075 1403 aa32.33■■■□□ 2.77
ITGA4-204ENST00000465522 KIF13AQ9H1H9 1805 aa32.32■■■□□ 2.76
ITGA4-204ENST00000465522 SCAPERQ9BY12 1400 aa32.31■■■□□ 2.76
ITGA4-204ENST00000465522 ADGBQ8N7X0 1667 aa32.3■■■□□ 2.76
ITGA4-204ENST00000465522 ANKRD30AQ9BXX3 1397 aa32.29■■■□□ 2.76
ITGA4-204ENST00000465522 NCOA1Q15788 1441 aa32.29■■■□□ 2.76
ITGA4-204ENST00000465522 TRAPPC8Q9Y2L5 1435 aa32.29■■■□□ 2.76
ITGA4-204ENST00000465522 NEO1Q92859 1461 aa32.29■■■□□ 2.76
ITGA4-204ENST00000465522 ADGRL2O95490 1459 aa32.28■■■□□ 2.76
ITGA4-204ENST00000465522 HRCP23327 699 aa32.28■■■□□ 2.76
ITGA4-204ENST00000465522 TSPOAP1O95153 1857 aa32.28■■■□□ 2.76
ITGA4-204ENST00000465522 AFAP1Q8N556 730 aa32.26■■■□□ 2.76
ITGA4-204ENST00000465522 GCC2Q8IWJ2 1684 aa32.25■■■□□ 2.75
ITGA4-204ENST00000465522 CCER1Q8TC90 406 aaPredicted RBP32.24■■■□□ 2.75
ITGA4-204ENST00000465522 MAST1Q9Y2H9 1570 aa32.22■■■□□ 2.75
ITGA4-204ENST00000465522 SPAG9O60271 1321 aaKnown RBP32.2■■■□□ 2.74
ITGA4-204ENST00000465522 TEX14Q8IWB6 1497 aa32.19■■■□□ 2.74
ITGA4-204ENST00000465522 PPRC1Q5VV67 1664 aaKnown RBP32.18■■■□□ 2.74
ITGA4-204ENST00000465522 ZNF518AQ6AHZ1 1483 aa32.16■■■□□ 2.74
ITGA4-204ENST00000465522 KIF15Q9NS87 1388 aa32.15■■■□□ 2.74
ITGA4-204ENST00000465522 RTEL1-TNFRSF6BF6WH68 1400 aa32.13■■■□□ 2.73
ITGA4-204ENST00000465522 MYT1LQ9UL68 1186 aa32.13■■■□□ 2.73
ITGA4-204ENST00000465522 DENND4BO75064 1496 aaPredicted RBP32.12■■■□□ 2.73
ITGA4-204ENST00000465522 TRHP20396 242 aaPredicted RBP32.12■■■□□ 2.73
ITGA4-204ENST00000465522 POGZQ7Z3K3 1410 aa32.12■■■□□ 2.73
ITGA4-204ENST00000465522 KDM6BO15054 1643 aa32.11■■■□□ 2.73
ITGA4-204ENST00000465522 ANKRD50Q9ULJ7 1429 aa32.09■■■□□ 2.73
ITGA4-204ENST00000465522 PLXNC1O60486 1568 aa32.09■■■□□ 2.73
ITGA4-204ENST00000465522 RAPGEF3O95398 923 aa32.09■■■□□ 2.73
ITGA4-204ENST00000465522 ACIN1Q9UKV3 1341 aaKnown RBP32.08■■■□□ 2.73
ITGA4-204ENST00000465522 DHX57Q6P158 1386 aaKnown RBP32.08■■■□□ 2.73
ITGA4-204ENST00000465522 ZFYVE16Q7Z3T8 1539 aa32.06■■■□□ 2.72
ITGA4-204ENST00000465522 ATP7AQ04656 1500 aa32.05■■■□□ 2.72
ITGA4-204ENST00000465522 TRIM52Q96A61 297 aa32.05■■■□□ 2.72
ITGA4-204ENST00000465522 KDM5CP41229 1560 aa32.04■■■□□ 2.72
ITGA4-204ENST00000465522 INO80Q9ULG1 1556 aaPredicted RBP32.04■■■□□ 2.72
ITGA4-204ENST00000465522 DUOX2Q9NRD8 1548 aa32■■■□□ 2.71
ITGA4-204ENST00000465522 RICTORQ6R327 1708 aa32■■■□□ 2.71
ITGA4-204ENST00000465522 MLH3Q9UHC1 1453 aa31.99■■■□□ 2.71
ITGA4-204ENST00000465522 KIDINS220Q9ULH0 1771 aa31.99■■■□□ 2.71
ITGA4-204ENST00000465522 HECW2Q9P2P5 1572 aa31.96■■■□□ 2.71
ITGA4-204ENST00000465522 ERBINQ96RT1 1412 aa31.92■■■□□ 2.7
ITGA4-204ENST00000465522 ZEB1P37275 1124 aaPredicted RBP31.91■■■□□ 2.7
ITGA4-204ENST00000465522 CLSPNQ9HAW4 1339 aa31.91■■■□□ 2.7
ITGA4-204ENST00000465522 FRMPD1Q5SYB0 1578 aa31.9■■■□□ 2.7
ITGA4-204ENST00000465522 DHX29Q7Z478 1369 aaKnown RBP31.88■■■□□ 2.69
ITGA4-204ENST00000465522 MPHOSPH9Q99550 1183 aa31.87■■■□□ 2.69
ITGA4-204ENST00000465522 COL17A1Q9UMD9 1497 aaPredicted RBP31.86■■■□□ 2.69
ITGA4-204ENST00000465522 ZMYM4Q5VZL5 1548 aa31.84■■■□□ 2.69
ITGA4-204ENST00000465522 NUP155O75694 1391 aa31.84■■■□□ 2.69
ITGA4-204ENST00000465522 SLC4A1APQ9BWU0 796 aaKnown RBP31.83■■■□□ 2.69
ITGA4-204ENST00000465522 A2MP01023 1474 aa31.82■■■□□ 2.69
ITGA4-204ENST00000465522 ABCA6Q8N139 1617 aa31.82■■■□□ 2.68
ITGA4-204ENST00000465522 MAGI2Q86UL8 1455 aa31.81■■■□□ 2.68
ITGA4-204ENST00000465522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.79■■■□□ 2.68
ITGA4-204ENST00000465522 YEATS2Q9ULM3 1422 aa31.78■■■□□ 2.68
ITGA4-204ENST00000465522 KIF3BO15066 747 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms