RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
SNX4-202ENST00000465505 HOXB1P14653 301 aaPredicted RBP8.98□□□□□ -0.97
SNX4-202ENST00000465505 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
SNX4-202ENST00000465505 ZNF710Q8N1W2 664 aa8.98□□□□□ -0.97
SNX4-202ENST00000465505 FAM205CA6NFA0 338 aa8.96□□□□□ -0.98
SNX4-202ENST00000465505 KIF3CO14782 793 aa8.96□□□□□ -0.98
SNX4-202ENST00000465505 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
SNX4-202ENST00000465505 DNAJC5Q9H3Z4 198 aa8.95□□□□□ -0.98
SNX4-202ENST00000465505 C2orf72A6NCS6 295 aa8.94□□□□□ -0.98
SNX4-202ENST00000465505 RIMBP2O15034 1052 aa8.94□□□□□ -0.98
SNX4-202ENST00000465505 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
SNX4-202ENST00000465505 GPR153Q6NV75 609 aa8.93□□□□□ -0.98
SNX4-202ENST00000465505 ZSWIM6Q9HCJ5 1215 aa8.93□□□□□ -0.98
SNX4-202ENST00000465505 ERBB3P21860 1342 aa8.88□□□□□ -0.99
SNX4-202ENST00000465505 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
SNX4-202ENST00000465505 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
SNX4-202ENST00000465505 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
SNX4-202ENST00000465505 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
SNX4-202ENST00000465505 SPNS2Q8IVW8 549 aa8.85□□□□□ -0.99
SNX4-202ENST00000465505 SLC34A2O95436 690 aa8.84□□□□□ -0.99
SNX4-202ENST00000465505 KHSRPQ92945 711 aaKnown RBP eCLIP8.84□□□□□ -0.996e-7■■■■□ 21.8
SNX4-202ENST00000465505 VARS2Q5ST30 1063 aaKnown RBP8.83□□□□□ -1
SNX4-202ENST00000465505 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
SNX4-202ENST00000465505 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
SNX4-202ENST00000465505 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
SNX4-202ENST00000465505 FOXK1P85037 733 aa8.8□□□□□ -1
SNX4-202ENST00000465505 DCAF8L2P0C7V8 631 aa8.79□□□□□ -1
SNX4-202ENST00000465505 MMRN1Q13201 1228 aa8.79□□□□□ -1
SNX4-202ENST00000465505 ZNF687Q8N1G0 1237 aa8.79□□□□□ -1
SNX4-202ENST00000465505 PCDHGA4Q9Y5G9 962 aa8.79□□□□□ -1
SNX4-202ENST00000465505 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
SNX4-202ENST00000465505 PLPP6Q8IY26 295 aa8.78□□□□□ -1
SNX4-202ENST00000465505 NUDT7P0C024 238 aa8.77□□□□□ -1.01
SNX4-202ENST00000465505 DSG2Q14126 1118 aa8.77□□□□□ -1.01
SNX4-202ENST00000465505 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
SNX4-202ENST00000465505 KDM4FA0A1W2PPD8 638 aa8.74□□□□□ -1.01
SNX4-202ENST00000465505 CRISPLD2Q9H0B8 497 aa8.74□□□□□ -1.01
SNX4-202ENST00000465505 LHX6Q9UPM6 363 aa8.73□□□□□ -1.01
SNX4-202ENST00000465505 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
SNX4-202ENST00000465505 PDE4AP27815 886 aa8.7□□□□□ -1.02
SNX4-202ENST00000465505 AMER1Q5JTC6 1135 aaPredicted RBP8.67□□□□□ -1.02
SNX4-202ENST00000465505 PPP1R15BQ5SWA1 713 aa8.67□□□□□ -1.02
SNX4-202ENST00000465505 POTEEQ6S8J3 1075 aa8.67□□□□□ -1.02
SNX4-202ENST00000465505 OXER1Q8TDS5 423 aa8.67□□□□□ -1.02
SNX4-202ENST00000465505 TBC1D12O60347 775 aa8.66□□□□□ -1.02
SNX4-202ENST00000465505 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
SNX4-202ENST00000465505 LARP6Q9BRS8 491 aaKnown RBP8.65□□□□□ -1.02
SNX4-202ENST00000465505 ANKRD13DQ6ZTN6 518 aa8.64□□□□□ -1.03
SNX4-202ENST00000465505 BBXQ8WY36 941 aaPredicted RBP8.64□□□□□ -1.03
SNX4-202ENST00000465505 PSDA5PKW4 1024 aaPredicted RBP8.63□□□□□ -1.03
SNX4-202ENST00000465505 PBX2P40425 430 aa8.63□□□□□ -1.03
SNX4-202ENST00000465505 LSM11P83369 360 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX4-202ENST00000465505 CADPS2Q86UW7 1296 aa8.63□□□□□ -1.03
SNX4-202ENST00000465505 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX4-202ENST00000465505 AXIN2Q9Y2T1 843 aa8.63□□□□□ -1.03
SNX4-202ENST00000465505 MFSD10Q14728 455 aa8.62□□□□□ -1.03
SNX4-202ENST00000465505 DDX27Q96GQ7 796 aaKnown RBP8.61□□□□□ -1.03
SNX4-202ENST00000465505 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
SNX4-202ENST00000465505 MYT1LQ9UL68 1186 aa8.59□□□□□ -1.03
SNX4-202ENST00000465505 ANO8Q9HCE9 1232 aaPredicted RBP8.58□□□□□ -1.04
SNX4-202ENST00000465505 PTGER2P43116 358 aa8.57□□□□□ -1.04
SNX4-202ENST00000465505 PPP4R3BQ5MIZ7 849 aa8.57□□□□□ -1.04
SNX4-202ENST00000465505 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
SNX4-202ENST00000465505 EMILIN3Q9NT22 766 aa8.56□□□□□ -1.04
SNX4-202ENST00000465505 PSEN2P49810 448 aa8.55□□□□□ -1.04
SNX4-202ENST00000465505 SPRYD3Q8NCJ5 442 aa8.55□□□□□ -1.04
SNX4-202ENST00000465505 EVI5O60447 810 aa8.54□□□□□ -1.04
SNX4-202ENST00000465505 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
SNX4-202ENST00000465505 FOSBP53539 338 aa8.53□□□□□ -1.04
SNX4-202ENST00000465505 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
SNX4-202ENST00000465505 ADGRD1Q6QNK2 874 aa8.52□□□□□ -1.05
SNX4-202ENST00000465505 ZNF454Q8N9F8 522 aa8.52□□□□□ -1.05
SNX4-202ENST00000465505 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.52□□□□□ -1.05
SNX4-202ENST00000465505 TK2O00142 265 aa8.51□□□□□ -1.05
SNX4-202ENST00000465505 CAMK2BQ13554 666 aa8.51□□□□□ -1.05
SNX4-202ENST00000465505 HRO43593 1189 aa8.49□□□□□ -1.05
SNX4-202ENST00000465505 BCL2L12Q9HB09 334 aa8.49□□□□□ -1.05
SNX4-202ENST00000465505 JPH4Q96JJ6 628 aa8.48□□□□□ -1.05
SNX4-202ENST00000465505 KCNK17Q96T54 332 aa8.48□□□□□ -1.05
SNX4-202ENST00000465505 PAXIP1Q6ZW49 1069 aaPredicted RBP8.47□□□□□ -1.05
SNX4-202ENST00000465505 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
SNX4-202ENST00000465505 CFAP44Q96MT7 982 aa8.46□□□□□ -1.06
SNX4-202ENST00000465505 KCNH8Q96L42 1107 aa8.45□□□□□ -1.06
SNX4-202ENST00000465505 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
SNX4-202ENST00000465505 PTPREP23469 700 aa8.44□□□□□ -1.06
SNX4-202ENST00000465505 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
SNX4-202ENST00000465505 PCDHGA10Q9Y5H3 936 aa8.44□□□□□ -1.06
SNX4-202ENST00000465505 DPYSL4O14531 572 aa8.43□□□□□ -1.06
SNX4-202ENST00000465505 SLC4A5Q9BY07 1137 aa8.43□□□□□ -1.06
SNX4-202ENST00000465505 PHF14O94880 888 aa8.41□□□□□ -1.06
SNX4-202ENST00000465505 ZBED2Q9BTP6 218 aa8.41□□□□□ -1.06
SNX4-202ENST00000465505 BHMG1C9JSJ3 638 aaPredicted RBP8.39□□□□□ -1.07
SNX4-202ENST00000465505 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
SNX4-202ENST00000465505 FBXW7Q969H0 707 aa8.38□□□□□ -1.07
SNX4-202ENST00000465505 STAC3Q96MF2 364 aa8.38□□□□□ -1.07
SNX4-202ENST00000465505 HCSTQ9UBK5 93 aa8.38□□□□□ -1.07
SNX4-202ENST00000465505 E2F4Q16254 413 aa8.36□□□□□ -1.07
SNX4-202ENST00000465505 EPAS1Q99814 870 aa8.36□□□□□ -1.07
SNX4-202ENST00000465505 COL9A1P20849 921 aa8.35□□□□□ -1.07
SNX4-202ENST00000465505 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms