RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 ZMYM4Q5VZL5 1548 aa23.08■■□□□ 1.29
ABCA4-203ENST00000465352 ARHGAP5Q13017 1502 aa23.06■■□□□ 1.28
ABCA4-203ENST00000465352 POGZQ7Z3K3 1410 aa23.06■■□□□ 1.28
ABCA4-203ENST00000465352 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
ABCA4-203ENST00000465352 ADAMTSL3P82987 1691 aa23.05■■□□□ 1.28
ABCA4-203ENST00000465352 BCORL1Q5H9F3 1711 aa23.03■■□□□ 1.28
ABCA4-203ENST00000465352 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
ABCA4-203ENST00000465352 PTPRMP28827 1452 aa23.01■■□□□ 1.27
ABCA4-203ENST00000465352 HECW2Q9P2P5 1572 aa23■■□□□ 1.27
ABCA4-203ENST00000465352 ZNF518AQ6AHZ1 1483 aa22.99■■□□□ 1.27
ABCA4-203ENST00000465352 MYT1LQ9UL68 1186 aa22.99■■□□□ 1.27
ABCA4-203ENST00000465352 CDC42BPBQ9Y5S2 1711 aa22.96■■□□□ 1.27
ABCA4-203ENST00000465352 ATP10AO60312 1499 aa22.95■■□□□ 1.26
ABCA4-203ENST00000465352 AFAP1Q8N556 730 aa22.95■■□□□ 1.26
ABCA4-203ENST00000465352 MADDQ8WXG6 1647 aa22.95■■□□□ 1.26
ABCA4-203ENST00000465352 PREX2Q70Z35 1606 aa22.94■■□□□ 1.26
ABCA4-203ENST00000465352 C9orf84Q5VXU9 1444 aa22.92■■□□□ 1.26
ABCA4-203ENST00000465352 MLECQ14165 292 aa22.92■■□□□ 1.26
ABCA4-203ENST00000465352 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
ABCA4-203ENST00000465352 MTUS2Q5JR59 1369 aa22.9■■□□□ 1.26
ABCA4-203ENST00000465352 KDM5CP41229 1560 aa22.89■■□□□ 1.26
ABCA4-203ENST00000465352 RIMS1Q86UR5 1692 aaKnown RBP22.89■■□□□ 1.25
ABCA4-203ENST00000465352 ZNF777Q9ULD5 760 aaPredicted RBP22.88■■□□□ 1.25
ABCA4-203ENST00000465352 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
ABCA4-203ENST00000465352 ABCC1P33527 1531 aa22.86■■□□□ 1.25
ABCA4-203ENST00000465352 CCNB3Q8WWL7 1395 aa22.86■■□□□ 1.25
ABCA4-203ENST00000465352 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
ABCA4-203ENST00000465352 TRAPPC8Q9Y2L5 1435 aa22.84■■□□□ 1.25
ABCA4-203ENST00000465352 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
ABCA4-203ENST00000465352 CFDP1Q9UEE9 299 aaPredicted RBP22.84■■□□□ 1.25
ABCA4-203ENST00000465352 SIGLEC1Q9BZZ2 1709 aa22.83■■□□□ 1.25
ABCA4-203ENST00000465352 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
ABCA4-203ENST00000465352 ITSN2Q9NZM3 1697 aa22.83■■□□□ 1.24
ABCA4-203ENST00000465352 ARHGEF12Q9NZN5 1544 aa22.82■■□□□ 1.24
ABCA4-203ENST00000465352 FER1L4A9Z1Z3 1794 aa22.81■■□□□ 1.24
ABCA4-203ENST00000465352 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
ABCA4-203ENST00000465352 DIP2CQ9Y2E4 1556 aa22.79■■□□□ 1.24
ABCA4-203ENST00000465352 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
ABCA4-203ENST00000465352 EHBP1L1Q8N3D4 1523 aa22.77■■□□□ 1.24
ABCA4-203ENST00000465352 REREQ9P2R6 1566 aa22.77■■□□□ 1.24
ABCA4-203ENST00000465352 HNRNPMP52272 730 aaKnown RBP eCLIP22.77■■□□□ 1.24
ABCA4-203ENST00000465352 SPAG9O60271 1321 aaKnown RBP22.77■■□□□ 1.24
ABCA4-203ENST00000465352 SAMD9LQ8IVG5 1584 aa22.76■■□□□ 1.23
ABCA4-203ENST00000465352 KIAA1107Q9UPP5 1409 aa22.76■■□□□ 1.23
ABCA4-203ENST00000465352 ESF1Q9H501 851 aaKnown RBP22.76■■□□□ 1.23
ABCA4-203ENST00000465352 ABCA6Q8N139 1617 aa22.75■■□□□ 1.23
ABCA4-203ENST00000465352 SYCP2Q9BX26 1530 aa22.74■■□□□ 1.23
ABCA4-203ENST00000465352 KIDINS220Q9ULH0 1771 aa22.73■■□□□ 1.23
ABCA4-203ENST00000465352 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
ABCA4-203ENST00000465352 AGLP35573 1532 aa22.72■■□□□ 1.23
ABCA4-203ENST00000465352 VPS8Q8N3P4 1428 aa22.68■■□□□ 1.22
ABCA4-203ENST00000465352 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
ABCA4-203ENST00000465352 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
ABCA4-203ENST00000465352 SETD1BQ9UPS6 1966 aaKnown RBP22.67■■□□□ 1.22
ABCA4-203ENST00000465352 HSPA2P54652 639 aa22.65■■□□□ 1.22
ABCA4-203ENST00000465352 ATP7AQ04656 1500 aa22.65■■□□□ 1.22
ABCA4-203ENST00000465352 SUPT6HQ7KZ85 1726 aaKnown RBP22.65■■□□□ 1.22
ABCA4-203ENST00000465352 ILDR1Q86SU0 546 aaPredicted RBP22.64■■□□□ 1.21
ABCA4-203ENST00000465352 ZNF644Q9H582 1327 aaPredicted RBP22.63■■□□□ 1.21
ABCA4-203ENST00000465352 NCOA2Q15596 1464 aa22.63■■□□□ 1.21
ABCA4-203ENST00000465352 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
ABCA4-203ENST00000465352 RSPH4AQ5TD94 716 aa22.61■■□□□ 1.21
ABCA4-203ENST00000465352 A2MP01023 1474 aa22.6■■□□□ 1.21
ABCA4-203ENST00000465352 INO80Q9ULG1 1556 aaPredicted RBP22.59■■□□□ 1.21
ABCA4-203ENST00000465352 PREX1Q8TCU6 1659 aa22.58■■□□□ 1.21
ABCA4-203ENST00000465352 MBD5Q9P267 1494 aa22.58■■□□□ 1.2
ABCA4-203ENST00000465352 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
ABCA4-203ENST00000465352 RTEL1-TNFRSF6BF6WH68 1400 aa22.57■■□□□ 1.2
ABCA4-203ENST00000465352 LRRC9Q6ZRR7 1453 aa22.56■■□□□ 1.2
ABCA4-203ENST00000465352 APLP2Q06481 763 aa22.55■■□□□ 1.2
ABCA4-203ENST00000465352 MAP3K1Q13233 1512 aa22.55■■□□□ 1.2
ABCA4-203ENST00000465352 C3P01024 1663 aa22.54■■□□□ 1.2
ABCA4-203ENST00000465352 CAMSAP2Q08AD1 1489 aa22.54■■□□□ 1.2
ABCA4-203ENST00000465352 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
ABCA4-203ENST00000465352 GGT6Q6P531 493 aa22.53■■□□□ 1.2
ABCA4-203ENST00000465352 PPP6R1Q9UPN7 881 aa22.53■■□□□ 1.2
ABCA4-203ENST00000465352 CCDC141Q6ZP82 1450 aa22.53■■□□□ 1.2
ABCA4-203ENST00000465352 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
ABCA4-203ENST00000465352 TSPY4P0CV99 314 aa22.52■■□□□ 1.2
ABCA4-203ENST00000465352 TSPY10P0CW01 314 aa22.52■■□□□ 1.2
ABCA4-203ENST00000465352 DMRT2Q9Y5R5 561 aa22.5■■□□□ 1.19
ABCA4-203ENST00000465352 ZMYM3Q14202 1370 aa22.5■■□□□ 1.19
ABCA4-203ENST00000465352 MROH2AA6NES4 1674 aa22.49■■□□□ 1.19
ABCA4-203ENST00000465352 DHX29Q7Z478 1369 aaKnown RBP22.49■■□□□ 1.19
ABCA4-203ENST00000465352 KANK4Q5T7N3 995 aaPredicted RBP22.48■■□□□ 1.19
ABCA4-203ENST00000465352 FBXO41Q8TF61 875 aa22.47■■□□□ 1.19
ABCA4-203ENST00000465352 NPATQ14207 1427 aa22.46■■□□□ 1.19
ABCA4-203ENST00000465352 ARHGEF5Q12774 1597 aa22.45■■□□□ 1.18
ABCA4-203ENST00000465352 MIA2Q96PC5 1412 aa22.43■■□□□ 1.18
ABCA4-203ENST00000465352 KIF3BO15066 747 aa22.43■■□□□ 1.18
ABCA4-203ENST00000465352 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
ABCA4-203ENST00000465352 MYOM3Q5VTT5 1437 aa22.42■■□□□ 1.18
ABCA4-203ENST00000465352 STRCQ7RTU9 1775 aa22.35■■□□□ 1.17
ABCA4-203ENST00000465352 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
ABCA4-203ENST00000465352 CERKQ8TCT0 537 aa22.35■■□□□ 1.17
ABCA4-203ENST00000465352 WASHC2CQ9Y4E1 1318 aa22.34■■□□□ 1.17
ABCA4-203ENST00000465352 FAM135AQ9P2D6 1515 aa22.34■■□□□ 1.17
ABCA4-203ENST00000465352 PTPRTO14522 1441 aa22.33■■□□□ 1.17
ABCA4-203ENST00000465352 MAST1Q9Y2H9 1570 aa22.33■■□□□ 1.16
ABCA4-203ENST00000465352 NCOA1Q15788 1441 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms