RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
COL11A1-207ENST00000465209 ARID4BQ4LE39 1312 aaPredicted RBP18.3■□□□□ 0.52
COL11A1-207ENST00000465209 SCAPERQ9BY12 1400 aa18.29■□□□□ 0.52
COL11A1-207ENST00000465209 KDM5CP41229 1560 aa18.26■□□□□ 0.51
COL11A1-207ENST00000465209 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
COL11A1-207ENST00000465209 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
COL11A1-207ENST00000465209 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
COL11A1-207ENST00000465209 ATP10AO60312 1499 aa18.22■□□□□ 0.51
COL11A1-207ENST00000465209 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
COL11A1-207ENST00000465209 C9orf84Q5VXU9 1444 aa18.22■□□□□ 0.51
COL11A1-207ENST00000465209 UBTFP17480 764 aaKnown RBP18.21■□□□□ 0.51
COL11A1-207ENST00000465209 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
COL11A1-207ENST00000465209 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
COL11A1-207ENST00000465209 DIP2CQ9Y2E4 1556 aa18.19■□□□□ 0.5
COL11A1-207ENST00000465209 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
COL11A1-207ENST00000465209 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
COL11A1-207ENST00000465209 REREQ9P2R6 1566 aa18.18■□□□□ 0.5
COL11A1-207ENST00000465209 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
COL11A1-207ENST00000465209 ABCA6Q8N139 1617 aa18.17■□□□□ 0.5
COL11A1-207ENST00000465209 EFCAB2Q5VUJ9 269 aa18.17■□□□□ 0.5
COL11A1-207ENST00000465209 PREX1Q8TCU6 1659 aa18.17■□□□□ 0.5
COL11A1-207ENST00000465209 ABCC1P33527 1531 aa18.16■□□□□ 0.5
COL11A1-207ENST00000465209 HSPA2P54652 639 aa18.15■□□□□ 0.5
COL11A1-207ENST00000465209 CDK11AQ9UQ88 783 aaPredicted RBP18.15■□□□□ 0.5
COL11A1-207ENST00000465209 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
COL11A1-207ENST00000465209 CLIP1P30622 1438 aa18.15■□□□□ 0.5
COL11A1-207ENST00000465209 CDC42BPAQ5VT25 1732 aa18.14■□□□□ 0.49
COL11A1-207ENST00000465209 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
COL11A1-207ENST00000465209 MLECQ14165 292 aa18.13■□□□□ 0.49
COL11A1-207ENST00000465209 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
COL11A1-207ENST00000465209 CCDC18Q5T9S5 1454 aa18.13■□□□□ 0.49
COL11A1-207ENST00000465209 MLH3Q9UHC1 1453 aa18.13■□□□□ 0.49
COL11A1-207ENST00000465209 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
COL11A1-207ENST00000465209 STRCQ7RTU9 1775 aa18.09■□□□□ 0.49
COL11A1-207ENST00000465209 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
COL11A1-207ENST00000465209 TRAPPC8Q9Y2L5 1435 aa18.09■□□□□ 0.49
COL11A1-207ENST00000465209 AGLP35573 1532 aa18.08■□□□□ 0.49
COL11A1-207ENST00000465209 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
COL11A1-207ENST00000465209 C3P01024 1663 aa18.08■□□□□ 0.48
COL11A1-207ENST00000465209 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
COL11A1-207ENST00000465209 SETD1BQ9UPS6 1966 aaKnown RBP18.06■□□□□ 0.48
COL11A1-207ENST00000465209 SAMD9LQ8IVG5 1584 aa18.04■□□□□ 0.48
COL11A1-207ENST00000465209 CEBPAP49715 358 aaPredicted RBP18.04■□□□□ 0.48
COL11A1-207ENST00000465209 UHRF1BP1Q6BDS2 1440 aa18■□□□□ 0.47
COL11A1-207ENST00000465209 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
COL11A1-207ENST00000465209 GPATCH8Q9UKJ3 1502 aaKnown RBP17.99■□□□□ 0.47
COL11A1-207ENST00000465209 CERKQ8TCT0 537 aa17.98■□□□□ 0.47
COL11A1-207ENST00000465209 MROH2AA6NES4 1674 aa17.97■□□□□ 0.47
COL11A1-207ENST00000465209 INO80Q9ULG1 1556 aaPredicted RBP17.97■□□□□ 0.47
COL11A1-207ENST00000465209 PLXNC1O60486 1568 aa17.96■□□□□ 0.47
COL11A1-207ENST00000465209 CNTLNQ9NXG0 1405 aa17.93■□□□□ 0.46
COL11A1-207ENST00000465209 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
COL11A1-207ENST00000465209 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
COL11A1-207ENST00000465209 MYT1LQ9UL68 1186 aa17.92■□□□□ 0.46
COL11A1-207ENST00000465209 PTPRTO14522 1441 aa17.91■□□□□ 0.46
COL11A1-207ENST00000465209 KIAA1107Q9UPP5 1409 aa17.91■□□□□ 0.46
COL11A1-207ENST00000465209 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
COL11A1-207ENST00000465209 NPATQ14207 1427 aa17.89■□□□□ 0.45
COL11A1-207ENST00000465209 NCOA1Q15788 1441 aa17.89■□□□□ 0.45
COL11A1-207ENST00000465209 LTBP4Q8N2S1 1624 aa17.88■□□□□ 0.45
COL11A1-207ENST00000465209 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
COL11A1-207ENST00000465209 CLTCQ00610 1675 aaKnown RBP17.88■□□□□ 0.45
COL11A1-207ENST00000465209 PLEKHH2Q8IVE3 1493 aa17.88■□□□□ 0.45
COL11A1-207ENST00000465209 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
COL11A1-207ENST00000465209 SPAG9O60271 1321 aaKnown RBP17.85■□□□□ 0.45
COL11A1-207ENST00000465209 A2MP01023 1474 aa17.85■□□□□ 0.45
COL11A1-207ENST00000465209 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL11A1-207ENST00000465209 EHBP1L1Q8N3D4 1523 aa17.85■□□□□ 0.45
COL11A1-207ENST00000465209 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
COL11A1-207ENST00000465209 MYO3AQ8NEV4 1616 aa17.85■□□□□ 0.45
COL11A1-207ENST00000465209 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
COL11A1-207ENST00000465209 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.45
COL11A1-207ENST00000465209 MBD5Q9P267 1494 aa17.83■□□□□ 0.45
COL11A1-207ENST00000465209 ZMYM3Q14202 1370 aa17.83■□□□□ 0.45
COL11A1-207ENST00000465209 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.45
COL11A1-207ENST00000465209 ESF1Q9H501 851 aaKnown RBP17.81■□□□□ 0.44
COL11A1-207ENST00000465209 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
COL11A1-207ENST00000465209 PTPRKQ15262 1439 aa17.81■□□□□ 0.44
COL11A1-207ENST00000465209 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
COL11A1-207ENST00000465209 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
COL11A1-207ENST00000465209 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
COL11A1-207ENST00000465209 CEP170BQ9Y4F5 1589 aaPredicted RBP17.79■□□□□ 0.44
COL11A1-207ENST00000465209 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
COL11A1-207ENST00000465209 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
COL11A1-207ENST00000465209 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
COL11A1-207ENST00000465209 RTEL1-TNFRSF6BF6WH68 1400 aa17.76■□□□□ 0.43
COL11A1-207ENST00000465209 DNMT1P26358 1616 aaKnown RBP17.72■□□□□ 0.43
COL11A1-207ENST00000465209 CAMSAP2Q08AD1 1489 aa17.71■□□□□ 0.43
COL11A1-207ENST00000465209 NCOA2Q15596 1464 aa17.71■□□□□ 0.43
COL11A1-207ENST00000465209 CCDC141Q6ZP82 1450 aa17.71■□□□□ 0.43
COL11A1-207ENST00000465209 DHX29Q7Z478 1369 aaKnown RBP17.7■□□□□ 0.42
COL11A1-207ENST00000465209 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
COL11A1-207ENST00000465209 FAM135AQ9P2D6 1515 aa17.7■□□□□ 0.42
COL11A1-207ENST00000465209 GGT6Q6P531 493 aa17.69■□□□□ 0.42
COL11A1-207ENST00000465209 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
COL11A1-207ENST00000465209 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
COL11A1-207ENST00000465209 KDM5DQ9BY66 1539 aa17.68■□□□□ 0.42
COL11A1-207ENST00000465209 ARHGEF5Q12774 1597 aa17.68■□□□□ 0.42
COL11A1-207ENST00000465209 POLR1AO95602 1720 aaPredicted RBP17.67■□□□□ 0.42
COL11A1-207ENST00000465209 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms