RNA–Protein interactions for RNA: ENST00000464916.1

COL1A2-203, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-203ENST00000464916 APLP2Q06481 763 aa13.99□□□□□ -0.17
COL1A2-203ENST00000464916 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
COL1A2-203ENST00000464916 EFCAB2Q5VUJ9 269 aa13.99□□□□□ -0.17
COL1A2-203ENST00000464916 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
COL1A2-203ENST00000464916 TROQ12816 1431 aaPredicted RBP13.98□□□□□ -0.17
COL1A2-203ENST00000464916 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
COL1A2-203ENST00000464916 ZNF777Q9ULD5 760 aaPredicted RBP13.98□□□□□ -0.17
COL1A2-203ENST00000464916 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
COL1A2-203ENST00000464916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL1A2-203ENST00000464916 FANCAO15360 1455 aa13.96□□□□□ -0.17
COL1A2-203ENST00000464916 KIF14Q15058 1648 aa13.95□□□□□ -0.18
COL1A2-203ENST00000464916 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
COL1A2-203ENST00000464916 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
COL1A2-203ENST00000464916 NEO1Q92859 1461 aa13.94□□□□□ -0.18
COL1A2-203ENST00000464916 TTC37Q6PGP7 1564 aa13.94□□□□□ -0.18
COL1A2-203ENST00000464916 PLCH2O75038 1416 aa13.93□□□□□ -0.18
COL1A2-203ENST00000464916 ARHGAP5Q13017 1502 aa13.92□□□□□ -0.18
COL1A2-203ENST00000464916 DENND4BO75064 1496 aaPredicted RBP13.91□□□□□ -0.18
COL1A2-203ENST00000464916 SCAPERQ9BY12 1400 aa13.9□□□□□ -0.18
COL1A2-203ENST00000464916 MAP3K1Q13233 1512 aa13.9□□□□□ -0.18
COL1A2-203ENST00000464916 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.18
COL1A2-203ENST00000464916 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.18
COL1A2-203ENST00000464916 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
COL1A2-203ENST00000464916 CCNB3Q8WWL7 1395 aa13.9□□□□□ -0.18
COL1A2-203ENST00000464916 CFAP74Q9C0B2 1584 aa13.89□□□□□ -0.19
COL1A2-203ENST00000464916 ADGRL1O94910 1474 aa13.89□□□□□ -0.19
COL1A2-203ENST00000464916 MYO5CQ9NQX4 1742 aa13.87□□□□□ -0.19
COL1A2-203ENST00000464916 AFAP1Q8N556 730 aa13.86□□□□□ -0.19
COL1A2-203ENST00000464916 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
COL1A2-203ENST00000464916 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL1A2-203ENST00000464916 MLECQ14165 292 aa13.83□□□□□ -0.2
COL1A2-203ENST00000464916 PCGF6Q9BYE7 350 aa13.82□□□□□ -0.2
COL1A2-203ENST00000464916 EHBP1L1Q8N3D4 1523 aa13.8□□□□□ -0.2
COL1A2-203ENST00000464916 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
COL1A2-203ENST00000464916 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
COL1A2-203ENST00000464916 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
COL1A2-203ENST00000464916 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
COL1A2-203ENST00000464916 ZNF518AQ6AHZ1 1483 aa13.78□□□□□ -0.2
COL1A2-203ENST00000464916 TIAM1Q13009 1591 aa13.78□□□□□ -0.2
COL1A2-203ENST00000464916 SPAG9O60271 1321 aaKnown RBP13.77□□□□□ -0.21
COL1A2-203ENST00000464916 PREX2Q70Z35 1606 aa13.77□□□□□ -0.21
COL1A2-203ENST00000464916 ZFYVE16Q7Z3T8 1539 aa13.77□□□□□ -0.21
COL1A2-203ENST00000464916 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
COL1A2-203ENST00000464916 FRMPD1Q5SYB0 1578 aa13.76□□□□□ -0.21
COL1A2-203ENST00000464916 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
COL1A2-203ENST00000464916 LRRC9Q6ZRR7 1453 aa13.76□□□□□ -0.21
COL1A2-203ENST00000464916 YEATS2Q9ULM3 1422 aa13.76□□□□□ -0.21
COL1A2-203ENST00000464916 TRAPPC8Q9Y2L5 1435 aa13.75□□□□□ -0.21
COL1A2-203ENST00000464916 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
COL1A2-203ENST00000464916 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
COL1A2-203ENST00000464916 RICTORQ6R327 1708 aa13.75□□□□□ -0.21
COL1A2-203ENST00000464916 MAGI2Q86UL8 1455 aa13.74□□□□□ -0.21
COL1A2-203ENST00000464916 SUPT6HQ7KZ85 1726 aaKnown RBP13.74□□□□□ -0.21
COL1A2-203ENST00000464916 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
COL1A2-203ENST00000464916 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
COL1A2-203ENST00000464916 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
COL1A2-203ENST00000464916 ABCC1P33527 1531 aa13.72□□□□□ -0.21
COL1A2-203ENST00000464916 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
COL1A2-203ENST00000464916 ATP10AO60312 1499 aa13.72□□□□□ -0.21
COL1A2-203ENST00000464916 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
COL1A2-203ENST00000464916 ARHGEF12Q9NZN5 1544 aa13.71□□□□□ -0.21
COL1A2-203ENST00000464916 TSPY4P0CV99 314 aa13.71□□□□□ -0.21
COL1A2-203ENST00000464916 TSPY10P0CW01 314 aa13.71□□□□□ -0.21
COL1A2-203ENST00000464916 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.22
COL1A2-203ENST00000464916 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
COL1A2-203ENST00000464916 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
COL1A2-203ENST00000464916 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
COL1A2-203ENST00000464916 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
COL1A2-203ENST00000464916 KIAA1107Q9UPP5 1409 aa13.68□□□□□ -0.22
COL1A2-203ENST00000464916 HECW2Q9P2P5 1572 aa13.67□□□□□ -0.22
COL1A2-203ENST00000464916 ZBTB22O15209 634 aa13.67□□□□□ -0.22
COL1A2-203ENST00000464916 RSPH4AQ5TD94 716 aa13.67□□□□□ -0.22
COL1A2-203ENST00000464916 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
COL1A2-203ENST00000464916 FAM50AQ14320 339 aaKnown RBP13.66□□□□□ -0.22
COL1A2-203ENST00000464916 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
COL1A2-203ENST00000464916 GGT6Q6P531 493 aa13.65□□□□□ -0.22
COL1A2-203ENST00000464916 KDM5CP41229 1560 aa13.65□□□□□ -0.22
COL1A2-203ENST00000464916 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
COL1A2-203ENST00000464916 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
COL1A2-203ENST00000464916 BCORL1Q5H9F3 1711 aa13.61□□□□□ -0.23
COL1A2-203ENST00000464916 PTPRMP28827 1452 aa13.61□□□□□ -0.23
COL1A2-203ENST00000464916 CCDC141Q6ZP82 1450 aa13.61□□□□□ -0.23
COL1A2-203ENST00000464916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL1A2-203ENST00000464916 ATP7AQ04656 1500 aa13.61□□□□□ -0.23
COL1A2-203ENST00000464916 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
COL1A2-203ENST00000464916 DIP2CQ9Y2E4 1556 aa13.61□□□□□ -0.23
COL1A2-203ENST00000464916 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
COL1A2-203ENST00000464916 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
COL1A2-203ENST00000464916 ABCA6Q8N139 1617 aa13.6□□□□□ -0.23
COL1A2-203ENST00000464916 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
COL1A2-203ENST00000464916 MBD5Q9P267 1494 aa13.6□□□□□ -0.23
COL1A2-203ENST00000464916 KIF3BO15066 747 aa13.59□□□□□ -0.23
COL1A2-203ENST00000464916 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
COL1A2-203ENST00000464916 A2MP01023 1474 aa13.59□□□□□ -0.23
COL1A2-203ENST00000464916 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.23
COL1A2-203ENST00000464916 ITGAEP38570 1179 aa13.58□□□□□ -0.24
COL1A2-203ENST00000464916 RIMS1Q86UR5 1692 aaKnown RBP13.58□□□□□ -0.24
COL1A2-203ENST00000464916 ADAMTSL3P82987 1691 aa13.57□□□□□ -0.24
COL1A2-203ENST00000464916 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
COL1A2-203ENST00000464916 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms